Protein–RNA interactions for Protein: P17980

PSMC3, 26S proteasome regulatory subunit 6A, humanhuman

Predictions only

Length 439 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC3P17980 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
PSMC3P17980 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC30.44■■■□□ 2.46
PSMC3P17980 AL031258.1-201ENST00000623562 325 ntBASIC30.43■■■□□ 2.46
PSMC3P17980 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
PSMC3P17980 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC30.35■■■□□ 2.45
PSMC3P17980 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC30.33■■■□□ 2.45
PSMC3P17980 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC30.32■■■□□ 2.44
PSMC3P17980 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
PSMC3P17980 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC30.28■■■□□ 2.44
PSMC3P17980 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC30.27■■■□□ 2.44
PSMC3P17980 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC30.27■■■□□ 2.44
PSMC3P17980 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC30.25■■■□□ 2.43
PSMC3P17980 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
PSMC3P17980 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
PSMC3P17980 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC30.19■■■□□ 2.42
PSMC3P17980 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
PSMC3P17980 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC30.19■■■□□ 2.42
PSMC3P17980 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC30.19■■■□□ 2.42
PSMC3P17980 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC30.18■■■□□ 2.42
PSMC3P17980 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
PSMC3P17980 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC30.09■■■□□ 2.41
PSMC3P17980 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
PSMC3P17980 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC30.05■■■□□ 2.4
PSMC3P17980 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC30.03■■■□□ 2.4
PSMC3P17980 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC30.03■■■□□ 2.4
PSMC3P17980 ILK-212ENST00000532063 1617 ntTSL 2 BASIC30.03■■■□□ 2.4
PSMC3P17980 RARRES2P7-201ENST00000567349 469 ntBASIC30.01■■■□□ 2.39
PSMC3P17980 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC30.01■■■□□ 2.39
PSMC3P17980 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC30■■■□□ 2.39
PSMC3P17980 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC30■■■□□ 2.39
PSMC3P17980 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC29.98■■■□□ 2.39
PSMC3P17980 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
PSMC3P17980 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC29.97■■■□□ 2.39
PSMC3P17980 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC29.97■■■□□ 2.39
PSMC3P17980 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC29.96■■■□□ 2.39
PSMC3P17980 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC29.95■■■□□ 2.39
PSMC3P17980 EBPL-203ENST00000378270 579 ntTSL 2 BASIC29.94■■■□□ 2.38
PSMC3P17980 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC29.92■■■□□ 2.38
PSMC3P17980 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC29.91■■■□□ 2.38
PSMC3P17980 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC29.9■■■□□ 2.38
PSMC3P17980 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC29.88■■■□□ 2.37
PSMC3P17980 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC29.88■■■□□ 2.37
PSMC3P17980 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
PSMC3P17980 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC29.86■■■□□ 2.37
PSMC3P17980 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
PSMC3P17980 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC29.84■■■□□ 2.37
PSMC3P17980 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC29.81■■■□□ 2.36
PSMC3P17980 AC097358.2-201ENST00000607541 1159 ntBASIC29.77■■■□□ 2.36
PSMC3P17980 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC29.75■■■□□ 2.35
PSMC3P17980 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC29.72■■■□□ 2.35
PSMC3P17980 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC29.72■■■□□ 2.35
PSMC3P17980 KLF16-203ENST00000592313 508 ntTSL 3 BASIC29.72■■■□□ 2.35
PSMC3P17980 SETD8P1-201ENST00000623146 1180 ntBASIC29.72■■■□□ 2.35
PSMC3P17980 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.35
PSMC3P17980 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
PSMC3P17980 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
PSMC3P17980 AC136428.2-201ENST00000563187 214 ntBASIC29.67■■■□□ 2.34
PSMC3P17980 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
PSMC3P17980 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC29.62■■■□□ 2.33
PSMC3P17980 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
PSMC3P17980 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC29.59■■■□□ 2.33
PSMC3P17980 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC29.55■■■□□ 2.32
PSMC3P17980 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC29.55■■■□□ 2.32
PSMC3P17980 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
PSMC3P17980 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC29.52■■■□□ 2.32
PSMC3P17980 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC29.51■■■□□ 2.31
PSMC3P17980 SUZ12P1-203ENST00000578195 985 ntBASIC29.51■■■□□ 2.31
PSMC3P17980 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC29.5■■■□□ 2.31
PSMC3P17980 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
PSMC3P17980 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
PSMC3P17980 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC29.48■■■□□ 2.31
PSMC3P17980 MVK-208ENST00000539696 608 ntTSL 5 BASIC29.48■■■□□ 2.31
PSMC3P17980 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC29.47■■■□□ 2.31
PSMC3P17980 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC29.46■■■□□ 2.31
PSMC3P17980 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC29.46■■■□□ 2.31
PSMC3P17980 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
PSMC3P17980 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC29.44■■■□□ 2.3
PSMC3P17980 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
PSMC3P17980 AC145285.7-201ENST00000614819 1539 ntBASIC29.41■■■□□ 2.3
PSMC3P17980 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC29.38■■■□□ 2.29
PSMC3P17980 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC29.37■■■□□ 2.29
PSMC3P17980 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC29.37■■■□□ 2.29
PSMC3P17980 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC29.34■■■□□ 2.29
PSMC3P17980 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
PSMC3P17980 RPS2P35-201ENST00000443417 897 ntBASIC29.33■■■□□ 2.29
PSMC3P17980 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC29.3■■■□□ 2.28
PSMC3P17980 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
PSMC3P17980 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
PSMC3P17980 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
PSMC3P17980 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC29.28■■■□□ 2.28
PSMC3P17980 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
PSMC3P17980 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC29.26■■■□□ 2.27
PSMC3P17980 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
PSMC3P17980 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
PSMC3P17980 CAHM-201ENST00000604200 896 ntBASIC29.21■■■□□ 2.27
PSMC3P17980 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC29.2■■■□□ 2.26
PSMC3P17980 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC29.18■■■□□ 2.26
PSMC3P17980 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
PSMC3P17980 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC29.15■■■□□ 2.26
PSMC3P17980 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.26
Retrieved 100 of 98,524 protein–RNA pairs in 9.1 ms