Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC36.91■■■■□ 3.5
COL11A2P13942 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC36.87■■■■□ 3.49
COL11A2P13942 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC36.86■■■■□ 3.49
COL11A2P13942 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC36.85■■■■□ 3.49
COL11A2P13942 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC36.8■■■■□ 3.48
COL11A2P13942 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC36.79■■■■□ 3.48
COL11A2P13942 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC36.77■■■■□ 3.48
COL11A2P13942 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC36.77■■■■□ 3.48
COL11A2P13942 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC36.76■■■■□ 3.48
COL11A2P13942 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC36.74■■■■□ 3.47
COL11A2P13942 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC36.74■■■■□ 3.47
COL11A2P13942 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC36.73■■■■□ 3.47
COL11A2P13942 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC36.71■■■■□ 3.47
COL11A2P13942 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC36.71■■■■□ 3.47
COL11A2P13942 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC36.7■■■■□ 3.47
COL11A2P13942 RARRES2P7-201ENST00000567349 469 ntBASIC36.66■■■■□ 3.46
COL11A2P13942 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC36.66■■■■□ 3.46
COL11A2P13942 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC36.62■■■■□ 3.45
COL11A2P13942 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC36.6■■■■□ 3.45
COL11A2P13942 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC36.56■■■■□ 3.44
COL11A2P13942 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC36.53■■■■□ 3.44
COL11A2P13942 AC136428.2-201ENST00000563187 214 ntBASIC36.51■■■■□ 3.44
COL11A2P13942 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC36.49■■■■□ 3.43
COL11A2P13942 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC36.45■■■■□ 3.43
COL11A2P13942 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC36.45■■■■□ 3.43
COL11A2P13942 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC36.42■■■■□ 3.42
COL11A2P13942 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC36.37■■■■□ 3.41
COL11A2P13942 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC36.34■■■■□ 3.41
COL11A2P13942 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC36.34■■■■□ 3.41
COL11A2P13942 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC36.33■■■■□ 3.41
COL11A2P13942 SUZ12P1-203ENST00000578195 985 ntBASIC36.33■■■■□ 3.41
COL11A2P13942 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC36.3■■■■□ 3.4
COL11A2P13942 AC097358.2-201ENST00000607541 1159 ntBASIC36.28■■■■□ 3.4
COL11A2P13942 SETD8P1-201ENST00000623146 1180 ntBASIC36.28■■■■□ 3.4
COL11A2P13942 EBPL-203ENST00000378270 579 ntTSL 2 BASIC36.26■■■■□ 3.4
COL11A2P13942 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC36.22■■■■□ 3.39
COL11A2P13942 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC36.22■■■■□ 3.39
COL11A2P13942 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC36.2■■■■□ 3.39
COL11A2P13942 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC36.2■■■■□ 3.38
COL11A2P13942 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC36.17■■■■□ 3.38
COL11A2P13942 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC36.17■■■■□ 3.38
COL11A2P13942 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC36.15■■■■□ 3.38
COL11A2P13942 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC36.14■■■■□ 3.38
COL11A2P13942 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC36.11■■■■□ 3.37
COL11A2P13942 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC36.1■■■■□ 3.37
COL11A2P13942 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC36.08■■■■□ 3.37
COL11A2P13942 RPS2P35-201ENST00000443417 897 ntBASIC36.06■■■■□ 3.36
COL11A2P13942 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC36.06■■■■□ 3.36
COL11A2P13942 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC36.04■■■■□ 3.36
COL11A2P13942 KLF16-203ENST00000592313 508 ntTSL 3 BASIC36.04■■■■□ 3.36
COL11A2P13942 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC36.01■■■■□ 3.35
COL11A2P13942 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC36■■■■□ 3.35
COL11A2P13942 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC36■■■■□ 3.35
COL11A2P13942 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC35.99■■■■□ 3.35
COL11A2P13942 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC35.98■■■■□ 3.35
COL11A2P13942 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC35.97■■■■□ 3.35
COL11A2P13942 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC35.95■■■■□ 3.35
COL11A2P13942 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC35.95■■■■□ 3.35
COL11A2P13942 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC35.88■■■■□ 3.33
COL11A2P13942 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC35.84■■■■□ 3.33
COL11A2P13942 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC35.83■■■■□ 3.33
COL11A2P13942 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC35.81■■■■□ 3.32
COL11A2P13942 AL162393.1-201ENST00000437852 946 ntBASIC35.77■■■■□ 3.32
COL11A2P13942 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC35.75■■■■□ 3.31
COL11A2P13942 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC35.75■■■■□ 3.31
COL11A2P13942 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC35.74■■■■□ 3.31
COL11A2P13942 ILK-212ENST00000532063 1617 ntTSL 2 BASIC35.68■■■■□ 3.3
COL11A2P13942 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC35.67■■■■□ 3.3
COL11A2P13942 AC145285.7-201ENST00000614819 1539 ntBASIC35.65■■■■□ 3.3
COL11A2P13942 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC35.64■■■■□ 3.3
COL11A2P13942 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC35.61■■■■□ 3.29
COL11A2P13942 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC35.6■■■■□ 3.29
COL11A2P13942 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC35.6■■■■□ 3.29
COL11A2P13942 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC35.59■■■■□ 3.29
COL11A2P13942 CAHM-201ENST00000604200 896 ntBASIC35.58■■■■□ 3.29
COL11A2P13942 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC35.57■■■■□ 3.28
COL11A2P13942 NRG1-221ENST00000614767 762 ntTSL 5 BASIC35.57■■■■□ 3.28
COL11A2P13942 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC35.54■■■■□ 3.28
COL11A2P13942 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC35.54■■■■□ 3.28
COL11A2P13942 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC35.54■■■■□ 3.28
COL11A2P13942 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC35.52■■■■□ 3.28
COL11A2P13942 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC35.52■■■■□ 3.28
COL11A2P13942 MVK-208ENST00000539696 608 ntTSL 5 BASIC35.49■■■■□ 3.27
COL11A2P13942 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC35.49■■■■□ 3.27
COL11A2P13942 AL391121.1-201ENST00000607967 1349 ntBASIC35.48■■■■□ 3.27
COL11A2P13942 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC35.45■■■■□ 3.27
COL11A2P13942 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC35.43■■■■□ 3.26
COL11A2P13942 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC35.43■■■■□ 3.26
COL11A2P13942 HNRNPLP2-201ENST00000568980 1570 ntBASIC35.42■■■■□ 3.26
COL11A2P13942 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC35.42■■■■□ 3.26
COL11A2P13942 AL133380.1-201ENST00000506013 324 ntBASIC35.42■■■■□ 3.26
COL11A2P13942 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC35.4■■■■□ 3.26
COL11A2P13942 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC35.4■■■■□ 3.26
COL11A2P13942 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC35.39■■■■□ 3.26
COL11A2P13942 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC35.39■■■■□ 3.26
COL11A2P13942 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC35.39■■■■□ 3.26
COL11A2P13942 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC35.38■■■■□ 3.25
COL11A2P13942 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC35.37■■■■□ 3.25
COL11A2P13942 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC35.37■■■■□ 3.25
COL11A2P13942 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC35.36■■■■□ 3.25
Retrieved 100 of 98,524 protein–RNA pairs in 13.6 ms