Protein–RNA interactions for Protein: P04035

HMGCR, 3-hydroxy-3-methylglutaryl-coenzyme A reductase, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCRP04035 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC33.64■■■□□ 2.98
HMGCRP04035 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC33.62■■■□□ 2.97
HMGCRP04035 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC33.61■■■□□ 2.97
HMGCRP04035 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC33.59■■■□□ 2.97
HMGCRP04035 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC33.54■■■□□ 2.96
HMGCRP04035 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC33.53■■■□□ 2.96
HMGCRP04035 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC33.52■■■□□ 2.96
HMGCRP04035 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC33.52■■■□□ 2.96
HMGCRP04035 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC33.52■■■□□ 2.96
HMGCRP04035 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC33.49■■■□□ 2.95
HMGCRP04035 RARRES2P7-201ENST00000567349 469 ntBASIC33.49■■■□□ 2.95
HMGCRP04035 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC33.47■■■□□ 2.95
HMGCRP04035 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC33.45■■■□□ 2.95
HMGCRP04035 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC33.44■■■□□ 2.94
HMGCRP04035 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC33.42■■■□□ 2.94
HMGCRP04035 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC33.42■■■□□ 2.94
HMGCRP04035 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC33.38■■■□□ 2.93
HMGCRP04035 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC33.37■■■□□ 2.93
HMGCRP04035 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC33.37■■■□□ 2.93
HMGCRP04035 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC33.3■■■□□ 2.92
HMGCRP04035 AC097358.2-201ENST00000607541 1159 ntBASIC33.25■■■□□ 2.91
HMGCRP04035 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC33.22■■■□□ 2.91
HMGCRP04035 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC33.21■■■□□ 2.91
HMGCRP04035 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC33.16■■■□□ 2.9
HMGCRP04035 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC33.16■■■□□ 2.9
HMGCRP04035 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC33.16■■■□□ 2.9
HMGCRP04035 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC33.16■■■□□ 2.9
HMGCRP04035 AC136428.2-201ENST00000563187 214 ntBASIC33.14■■■□□ 2.9
HMGCRP04035 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC33.14■■■□□ 2.9
HMGCRP04035 EBPL-203ENST00000378270 579 ntTSL 2 BASIC33.12■■■□□ 2.89
HMGCRP04035 SETD8P1-201ENST00000623146 1180 ntBASIC33.12■■■□□ 2.89
HMGCRP04035 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC33.08■■■□□ 2.89
HMGCRP04035 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC33.07■■■□□ 2.89
HMGCRP04035 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC33.07■■■□□ 2.88
HMGCRP04035 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC33.07■■■□□ 2.88
HMGCRP04035 SUZ12P1-203ENST00000578195 985 ntBASIC33.04■■■□□ 2.88
HMGCRP04035 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC33.01■■■□□ 2.87
HMGCRP04035 RPS2P35-201ENST00000443417 897 ntBASIC33.01■■■□□ 2.87
HMGCRP04035 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC33■■■□□ 2.87
HMGCRP04035 KLF16-203ENST00000592313 508 ntTSL 3 BASIC33■■■□□ 2.87
HMGCRP04035 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC32.99■■■□□ 2.87
HMGCRP04035 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC32.95■■■□□ 2.87
HMGCRP04035 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC32.94■■■□□ 2.86
HMGCRP04035 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC32.93■■■□□ 2.86
HMGCRP04035 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC32.93■■■□□ 2.86
HMGCRP04035 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC32.92■■■□□ 2.86
HMGCRP04035 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC32.89■■■□□ 2.86
HMGCRP04035 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC32.89■■■□□ 2.86
HMGCRP04035 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC32.87■■■□□ 2.85
HMGCRP04035 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC32.86■■■□□ 2.85
HMGCRP04035 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC32.85■■■□□ 2.85
HMGCRP04035 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC32.83■■■□□ 2.85
HMGCRP04035 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC32.83■■■□□ 2.85
HMGCRP04035 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC32.82■■■□□ 2.84
HMGCRP04035 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC32.81■■■□□ 2.84
HMGCRP04035 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC32.8■■■□□ 2.84
HMGCRP04035 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC32.8■■■□□ 2.84
HMGCRP04035 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC32.8■■■□□ 2.84
HMGCRP04035 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC32.78■■■□□ 2.84
HMGCRP04035 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC32.77■■■□□ 2.84
HMGCRP04035 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC32.75■■■□□ 2.83
HMGCRP04035 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC32.72■■■□□ 2.83
HMGCRP04035 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC32.62■■■□□ 2.81
HMGCRP04035 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC32.61■■■□□ 2.81
HMGCRP04035 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC32.58■■■□□ 2.81
HMGCRP04035 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC32.57■■■□□ 2.8
HMGCRP04035 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC32.56■■■□□ 2.8
HMGCRP04035 ILK-212ENST00000532063 1617 ntTSL 2 BASIC32.55■■■□□ 2.8
HMGCRP04035 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
HMGCRP04035 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC32.52■■■□□ 2.8
HMGCRP04035 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC32.5■■■□□ 2.79
HMGCRP04035 AL162393.1-201ENST00000437852 946 ntBASIC32.5■■■□□ 2.79
HMGCRP04035 CAHM-201ENST00000604200 896 ntBASIC32.5■■■□□ 2.79
HMGCRP04035 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC32.49■■■□□ 2.79
HMGCRP04035 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC32.48■■■□□ 2.79
HMGCRP04035 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC32.47■■■□□ 2.79
HMGCRP04035 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC32.45■■■□□ 2.79
HMGCRP04035 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC32.44■■■□□ 2.78
HMGCRP04035 AP006261.1-201ENST00000584783 668 ntBASIC32.44■■■□□ 2.78
HMGCRP04035 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC32.43■■■□□ 2.78
HMGCRP04035 MVK-208ENST00000539696 608 ntTSL 5 BASIC32.41■■■□□ 2.78
HMGCRP04035 NRG1-221ENST00000614767 762 ntTSL 5 BASIC32.41■■■□□ 2.78
HMGCRP04035 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC32.39■■■□□ 2.78
HMGCRP04035 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC32.39■■■□□ 2.78
HMGCRP04035 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
HMGCRP04035 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC32.38■■■□□ 2.77
HMGCRP04035 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC32.36■■■□□ 2.77
HMGCRP04035 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC32.35■■■□□ 2.77
HMGCRP04035 AL391121.1-201ENST00000607967 1349 ntBASIC32.34■■■□□ 2.77
HMGCRP04035 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC32.33■■■□□ 2.77
HMGCRP04035 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC32.33■■■□□ 2.77
HMGCRP04035 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC32.31■■■□□ 2.76
HMGCRP04035 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC32.31■■■□□ 2.76
HMGCRP04035 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC32.3■■■□□ 2.76
HMGCRP04035 AC145285.7-201ENST00000614819 1539 ntBASIC32.3■■■□□ 2.76
HMGCRP04035 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC32.29■■■□□ 2.76
HMGCRP04035 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
HMGCRP04035 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC32.24■■■□□ 2.75
HMGCRP04035 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC32.24■■■□□ 2.75
HMGCRP04035 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC32.23■■■□□ 2.75
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms