Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC39.58■■■■□ 3.93
LTN1O94822 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC39.56■■■■□ 3.92
LTN1O94822 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC39.56■■■■□ 3.92
LTN1O94822 AL031258.1-201ENST00000623562 325 ntBASIC39.54■■■■□ 3.92
LTN1O94822 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC39.53■■■■□ 3.92
LTN1O94822 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC39.43■■■■□ 3.9
LTN1O94822 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC39.41■■■■□ 3.9
LTN1O94822 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC39.41■■■■□ 3.9
LTN1O94822 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC39.41■■■■□ 3.9
LTN1O94822 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC39.38■■■■□ 3.9
LTN1O94822 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC39.37■■■■□ 3.89
LTN1O94822 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC39.37■■■■□ 3.89
LTN1O94822 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC39.32■■■■□ 3.89
LTN1O94822 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC39.32■■■■□ 3.88
LTN1O94822 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC39.31■■■■□ 3.88
LTN1O94822 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC39.25■■■■□ 3.87
LTN1O94822 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC39.24■■■■□ 3.87
LTN1O94822 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC39.2■■■■□ 3.87
LTN1O94822 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC39.16■■■■□ 3.86
LTN1O94822 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC39.15■■■■□ 3.86
LTN1O94822 RARRES2P7-201ENST00000567349 469 ntBASIC39.15■■■■□ 3.86
LTN1O94822 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC39.13■■■■□ 3.86
LTN1O94822 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC39.13■■■■□ 3.86
LTN1O94822 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC39.13■■■■□ 3.86
LTN1O94822 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC39.13■■■■□ 3.85
LTN1O94822 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC39.08■■■■□ 3.85
LTN1O94822 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC39.07■■■■□ 3.85
LTN1O94822 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC39.04■■■■□ 3.84
LTN1O94822 ILK-212ENST00000532063 1617 ntTSL 2 BASIC39.03■■■■□ 3.84
LTN1O94822 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC39.02■■■■□ 3.84
LTN1O94822 EBPL-203ENST00000378270 579 ntTSL 2 BASIC39■■■■□ 3.83
LTN1O94822 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC39■■■■□ 3.83
LTN1O94822 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC38.95■■■■□ 3.83
LTN1O94822 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC38.95■■■■□ 3.83
LTN1O94822 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC38.93■■■■□ 3.82
LTN1O94822 AC136428.2-201ENST00000563187 214 ntBASIC38.93■■■■□ 3.82
LTN1O94822 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC38.85■■■■□ 3.81
LTN1O94822 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC38.85■■■■□ 3.81
LTN1O94822 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC38.83■■■■□ 3.81
LTN1O94822 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC38.8■■■■□ 3.8
LTN1O94822 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC38.8■■■■□ 3.8
LTN1O94822 SETD8P1-201ENST00000623146 1180 ntBASIC38.76■■■■□ 3.8
LTN1O94822 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC38.75■■■■□ 3.79
LTN1O94822 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC38.74■■■■□ 3.79
LTN1O94822 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC38.73■■■■□ 3.79
LTN1O94822 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC38.72■■■■□ 3.79
LTN1O94822 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC38.7■■■■□ 3.79
LTN1O94822 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC38.7■■■■□ 3.79
LTN1O94822 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC38.68■■■■□ 3.78
LTN1O94822 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC38.65■■■■□ 3.78
LTN1O94822 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC38.65■■■■□ 3.78
LTN1O94822 AC097358.2-201ENST00000607541 1159 ntBASIC38.65■■■■□ 3.78
LTN1O94822 SUZ12P1-203ENST00000578195 985 ntBASIC38.65■■■■□ 3.78
LTN1O94822 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC38.63■■■■□ 3.77
LTN1O94822 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC38.63■■■■□ 3.77
LTN1O94822 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC38.61■■■■□ 3.77
LTN1O94822 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC38.6■■■■□ 3.77
LTN1O94822 KLF16-203ENST00000592313 508 ntTSL 3 BASIC38.59■■■■□ 3.77
LTN1O94822 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC38.58■■■■□ 3.77
LTN1O94822 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC38.57■■■■□ 3.77
LTN1O94822 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC38.57■■■■□ 3.76
LTN1O94822 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC38.57■■■■□ 3.76
LTN1O94822 AC145285.7-201ENST00000614819 1539 ntBASIC38.54■■■■□ 3.76
LTN1O94822 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC38.54■■■■□ 3.76
LTN1O94822 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC38.52■■■■□ 3.76
LTN1O94822 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC38.48■■■■□ 3.75
LTN1O94822 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC38.42■■■■□ 3.74
LTN1O94822 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC38.41■■■■□ 3.74
LTN1O94822 MVK-208ENST00000539696 608 ntTSL 5 BASIC38.39■■■■□ 3.74
LTN1O94822 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC38.36■■■■□ 3.73
LTN1O94822 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC38.33■■■■□ 3.73
LTN1O94822 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC38.32■■■■□ 3.73
LTN1O94822 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC38.31■■■■□ 3.72
LTN1O94822 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC38.3■■■■□ 3.72
LTN1O94822 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC38.3■■■■□ 3.72
LTN1O94822 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC38.3■■■■□ 3.72
LTN1O94822 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC38.29■■■■□ 3.72
LTN1O94822 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC38.26■■■■□ 3.72
LTN1O94822 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC38.26■■■■□ 3.72
LTN1O94822 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC38.18■■■■□ 3.7
LTN1O94822 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC38.17■■■■□ 3.7
LTN1O94822 RPS2P35-201ENST00000443417 897 ntBASIC38.17■■■■□ 3.7
LTN1O94822 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC38.11■■■■□ 3.69
LTN1O94822 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC38.09■■■■□ 3.69
LTN1O94822 AL133380.1-201ENST00000506013 324 ntBASIC38.07■■■■□ 3.68
LTN1O94822 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC38.07■■■■□ 3.68
LTN1O94822 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC38.06■■■■□ 3.68
LTN1O94822 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC38.06■■■■□ 3.68
LTN1O94822 AL162393.1-201ENST00000437852 946 ntBASIC38.06■■■■□ 3.68
LTN1O94822 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC38.06■■■■□ 3.68
LTN1O94822 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC38.05■■■■□ 3.68
LTN1O94822 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC38.05■■■■□ 3.68
LTN1O94822 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC38.04■■■■□ 3.68
LTN1O94822 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC38.03■■■■□ 3.68
LTN1O94822 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC37.99■■■■□ 3.67
LTN1O94822 CAHM-201ENST00000604200 896 ntBASIC37.99■■■■□ 3.67
LTN1O94822 AL391121.1-201ENST00000607967 1349 ntBASIC37.99■■■■□ 3.67
LTN1O94822 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC37.98■■■■□ 3.67
LTN1O94822 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC37.97■■■■□ 3.67
LTN1O94822 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC37.96■■■■□ 3.67
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms