Protein–RNA interactions for Protein: A0A0C4DH27

TRGV8, T-cell receptor gamma variable 8 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV8A0A0C4DH27 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC26.26■■□□□ 1.79
TRGV8A0A0C4DH27 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC26.26■■□□□ 1.79
TRGV8A0A0C4DH27 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC26.26■■□□□ 1.79
TRGV8A0A0C4DH27 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC26.22■■□□□ 1.79
TRGV8A0A0C4DH27 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC26.22■■□□□ 1.79
TRGV8A0A0C4DH27 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC26.22■■□□□ 1.79
TRGV8A0A0C4DH27 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
TRGV8A0A0C4DH27 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC26.21■■□□□ 1.79
TRGV8A0A0C4DH27 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
TRGV8A0A0C4DH27 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC26.2■■□□□ 1.78
TRGV8A0A0C4DH27 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC26.19■■□□□ 1.78
TRGV8A0A0C4DH27 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC26.18■■□□□ 1.78
TRGV8A0A0C4DH27 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC26.17■■□□□ 1.78
TRGV8A0A0C4DH27 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC26.14■■□□□ 1.78
TRGV8A0A0C4DH27 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC26.13■■□□□ 1.77
TRGV8A0A0C4DH27 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC26.12■■□□□ 1.77
TRGV8A0A0C4DH27 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC26.11■■□□□ 1.77
TRGV8A0A0C4DH27 RARRES2P7-201ENST00000567349 469 ntBASIC26.1■■□□□ 1.77
TRGV8A0A0C4DH27 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC26.07■■□□□ 1.76
TRGV8A0A0C4DH27 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
TRGV8A0A0C4DH27 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC26.03■■□□□ 1.76
TRGV8A0A0C4DH27 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC26.02■■□□□ 1.76
TRGV8A0A0C4DH27 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC26■■□□□ 1.75
TRGV8A0A0C4DH27 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
TRGV8A0A0C4DH27 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC25.99■■□□□ 1.75
TRGV8A0A0C4DH27 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
TRGV8A0A0C4DH27 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC25.94■■□□□ 1.74
TRGV8A0A0C4DH27 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC25.92■■□□□ 1.74
TRGV8A0A0C4DH27 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
TRGV8A0A0C4DH27 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC25.9■■□□□ 1.74
TRGV8A0A0C4DH27 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC25.88■■□□□ 1.73
TRGV8A0A0C4DH27 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC25.87■■□□□ 1.73
TRGV8A0A0C4DH27 AC097358.2-201ENST00000607541 1159 ntBASIC25.87■■□□□ 1.73
TRGV8A0A0C4DH27 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC25.87■■□□□ 1.73
TRGV8A0A0C4DH27 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC25.86■■□□□ 1.73
TRGV8A0A0C4DH27 EBPL-203ENST00000378270 579 ntTSL 2 BASIC25.84■■□□□ 1.73
TRGV8A0A0C4DH27 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC25.83■■□□□ 1.73
TRGV8A0A0C4DH27 SETD8P1-201ENST00000623146 1180 ntBASIC25.81■■□□□ 1.72
TRGV8A0A0C4DH27 ILK-212ENST00000532063 1617 ntTSL 2 BASIC25.79■■□□□ 1.72
TRGV8A0A0C4DH27 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
TRGV8A0A0C4DH27 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
TRGV8A0A0C4DH27 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
TRGV8A0A0C4DH27 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
TRGV8A0A0C4DH27 KLF16-203ENST00000592313 508 ntTSL 3 BASIC25.76■■□□□ 1.71
TRGV8A0A0C4DH27 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC25.74■■□□□ 1.71
TRGV8A0A0C4DH27 AC136428.2-201ENST00000563187 214 ntBASIC25.7■■□□□ 1.7
TRGV8A0A0C4DH27 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
TRGV8A0A0C4DH27 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC25.68■■□□□ 1.7
TRGV8A0A0C4DH27 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC25.66■■□□□ 1.7
TRGV8A0A0C4DH27 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
TRGV8A0A0C4DH27 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
TRGV8A0A0C4DH27 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
TRGV8A0A0C4DH27 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC25.6■■□□□ 1.69
TRGV8A0A0C4DH27 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
TRGV8A0A0C4DH27 SUZ12P1-203ENST00000578195 985 ntBASIC25.59■■□□□ 1.69
TRGV8A0A0C4DH27 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC25.58■■□□□ 1.69
TRGV8A0A0C4DH27 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC25.57■■□□□ 1.68
TRGV8A0A0C4DH27 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC25.57■■□□□ 1.68
TRGV8A0A0C4DH27 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
TRGV8A0A0C4DH27 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC25.56■■□□□ 1.68
TRGV8A0A0C4DH27 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
TRGV8A0A0C4DH27 RPS2P35-201ENST00000443417 897 ntBASIC25.56■■□□□ 1.68
TRGV8A0A0C4DH27 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
TRGV8A0A0C4DH27 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC25.55■■□□□ 1.68
TRGV8A0A0C4DH27 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC25.55■■□□□ 1.68
TRGV8A0A0C4DH27 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC25.54■■□□□ 1.68
TRGV8A0A0C4DH27 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
TRGV8A0A0C4DH27 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
TRGV8A0A0C4DH27 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC25.5■■□□□ 1.67
TRGV8A0A0C4DH27 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
TRGV8A0A0C4DH27 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
TRGV8A0A0C4DH27 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC25.48■■□□□ 1.67
TRGV8A0A0C4DH27 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC25.47■■□□□ 1.67
TRGV8A0A0C4DH27 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC25.46■■□□□ 1.67
TRGV8A0A0C4DH27 MVK-208ENST00000539696 608 ntTSL 5 BASIC25.46■■□□□ 1.67
TRGV8A0A0C4DH27 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC25.44■■□□□ 1.66
TRGV8A0A0C4DH27 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
TRGV8A0A0C4DH27 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
TRGV8A0A0C4DH27 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
TRGV8A0A0C4DH27 AC145285.7-201ENST00000614819 1539 ntBASIC25.37■■□□□ 1.65
TRGV8A0A0C4DH27 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
TRGV8A0A0C4DH27 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
TRGV8A0A0C4DH27 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC25.36■■□□□ 1.65
TRGV8A0A0C4DH27 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
TRGV8A0A0C4DH27 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC25.31■■□□□ 1.64
TRGV8A0A0C4DH27 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
TRGV8A0A0C4DH27 CAHM-201ENST00000604200 896 ntBASIC25.28■■□□□ 1.64
TRGV8A0A0C4DH27 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
TRGV8A0A0C4DH27 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC25.26■■□□□ 1.63
TRGV8A0A0C4DH27 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC25.25■■□□□ 1.63
TRGV8A0A0C4DH27 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
TRGV8A0A0C4DH27 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
TRGV8A0A0C4DH27 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
TRGV8A0A0C4DH27 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC25.2■■□□□ 1.63
TRGV8A0A0C4DH27 AL162393.1-201ENST00000437852 946 ntBASIC25.2■■□□□ 1.62
TRGV8A0A0C4DH27 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
TRGV8A0A0C4DH27 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC25.19■■□□□ 1.62
TRGV8A0A0C4DH27 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC25.19■■□□□ 1.62
TRGV8A0A0C4DH27 AP006261.1-201ENST00000584783 668 ntBASIC25.19■■□□□ 1.62
TRGV8A0A0C4DH27 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Retrieved 100 of 98,524 protein–RNA pairs in 83.6 ms