Protein–RNA interactions for Protein: A0A0C4DFX4

Uncharacterized protein (Fragment), humanhuman

Predictions only

Length 3,053 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
A0A0C4DFX4 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC31.78■■■□□ 2.68
A0A0C4DFX4 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
A0A0C4DFX4 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.68
A0A0C4DFX4 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
A0A0C4DFX4 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
A0A0C4DFX4 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
A0A0C4DFX4 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC31.66■■■□□ 2.66
A0A0C4DFX4 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC31.66■■■□□ 2.66
A0A0C4DFX4 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC31.65■■■□□ 2.66
A0A0C4DFX4 HLA-V-202ENST00000446817 847 ntBASIC31.6■■■□□ 2.65
A0A0C4DFX4 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC31.6■■■□□ 2.65
A0A0C4DFX4 AL031258.1-201ENST00000623562 325 ntBASIC31.6■■■□□ 2.65
A0A0C4DFX4 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC31.6■■■□□ 2.65
A0A0C4DFX4 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.65
A0A0C4DFX4 MIR7108-201ENST00000614319 87 ntBASIC31.53■■■□□ 2.64
A0A0C4DFX4 AL162393.1-201ENST00000437852 946 ntBASIC31.52■■■□□ 2.64
A0A0C4DFX4 PVT1-219ENST00000523427 938 ntTSL 3 BASIC31.52■■■□□ 2.64
A0A0C4DFX4 NRG1-221ENST00000614767 762 ntTSL 5 BASIC31.52■■■□□ 2.64
A0A0C4DFX4 ABHD17AP4-201ENST00000411545 909 ntBASIC31.42■■■□□ 2.62
A0A0C4DFX4 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC31.41■■■□□ 2.62
A0A0C4DFX4 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
A0A0C4DFX4 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC31.37■■■□□ 2.61
A0A0C4DFX4 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC31.35■■■□□ 2.61
A0A0C4DFX4 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
A0A0C4DFX4 MBP-237ENST00000579129 1052 ntTSL 5 BASIC31.34■■■□□ 2.61
A0A0C4DFX4 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.61
A0A0C4DFX4 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC31.3■■■□□ 2.6
A0A0C4DFX4 SETD8P1-201ENST00000623146 1180 ntBASIC31.3■■■□□ 2.6
A0A0C4DFX4 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
A0A0C4DFX4 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC31.27■■■□□ 2.6
A0A0C4DFX4 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.6
A0A0C4DFX4 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
A0A0C4DFX4 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC31.23■■■□□ 2.59
A0A0C4DFX4 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC31.2■■■□□ 2.58
A0A0C4DFX4 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC31.19■■■□□ 2.58
A0A0C4DFX4 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
A0A0C4DFX4 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC31.18■■■□□ 2.58
A0A0C4DFX4 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
A0A0C4DFX4 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC31.14■■■□□ 2.58
A0A0C4DFX4 HES6-203ENST00000409160 1600 ntTSL 2 BASIC31.13■■■□□ 2.57
A0A0C4DFX4 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
A0A0C4DFX4 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC31.08■■■□□ 2.57
A0A0C4DFX4 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
A0A0C4DFX4 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
A0A0C4DFX4 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
A0A0C4DFX4 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC31.06■■■□□ 2.56
A0A0C4DFX4 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC31.04■■■□□ 2.56
A0A0C4DFX4 AP006261.1-201ENST00000584783 668 ntBASIC31.02■■■□□ 2.56
A0A0C4DFX4 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
A0A0C4DFX4 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC30.98■■■□□ 2.55
A0A0C4DFX4 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC30.94■■■□□ 2.54
A0A0C4DFX4 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC30.93■■■□□ 2.54
A0A0C4DFX4 KLF16-203ENST00000592313 508 ntTSL 3 BASIC30.92■■■□□ 2.54
A0A0C4DFX4 MLEC-202ENST00000412616 841 ntTSL 3 BASIC30.88■■■□□ 2.53
A0A0C4DFX4 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC30.88■■■□□ 2.53
A0A0C4DFX4 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
A0A0C4DFX4 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC30.87■■■□□ 2.53
A0A0C4DFX4 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
A0A0C4DFX4 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC30.87■■■□□ 2.53
A0A0C4DFX4 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC30.85■■■□□ 2.53
A0A0C4DFX4 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC30.84■■■□□ 2.53
A0A0C4DFX4 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC30.82■■■□□ 2.52
A0A0C4DFX4 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC30.82■■■□□ 2.52
A0A0C4DFX4 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC30.8■■■□□ 2.52
A0A0C4DFX4 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC30.8■■■□□ 2.52
A0A0C4DFX4 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC30.77■■■□□ 2.52
A0A0C4DFX4 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC30.76■■■□□ 2.51
A0A0C4DFX4 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC30.75■■■□□ 2.51
A0A0C4DFX4 MIR4449-201ENST00000578365 66 ntBASIC30.75■■■□□ 2.51
A0A0C4DFX4 EBPL-203ENST00000378270 579 ntTSL 2 BASIC30.75■■■□□ 2.51
A0A0C4DFX4 CAHM-201ENST00000604200 896 ntBASIC30.75■■■□□ 2.51
A0A0C4DFX4 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC30.74■■■□□ 2.51
A0A0C4DFX4 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC30.72■■■□□ 2.51
A0A0C4DFX4 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
A0A0C4DFX4 RPS2-202ENST00000526522 924 ntTSL 2 BASIC30.71■■■□□ 2.51
A0A0C4DFX4 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC30.7■■■□□ 2.51
A0A0C4DFX4 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC30.7■■■□□ 2.51
A0A0C4DFX4 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
A0A0C4DFX4 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC30.69■■■□□ 2.5
A0A0C4DFX4 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
A0A0C4DFX4 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC30.68■■■□□ 2.5
A0A0C4DFX4 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC30.68■■■□□ 2.5
A0A0C4DFX4 HNRNPLP2-201ENST00000568980 1570 ntBASIC30.68■■■□□ 2.5
A0A0C4DFX4 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
A0A0C4DFX4 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC30.67■■■□□ 2.5
A0A0C4DFX4 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC30.62■■■□□ 2.49
A0A0C4DFX4 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
A0A0C4DFX4 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC30.61■■■□□ 2.49
A0A0C4DFX4 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
A0A0C4DFX4 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC30.57■■■□□ 2.48
A0A0C4DFX4 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC30.57■■■□□ 2.48
A0A0C4DFX4 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC30.55■■■□□ 2.48
A0A0C4DFX4 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC30.55■■■□□ 2.48
A0A0C4DFX4 MIR3665-201ENST00000578708 105 ntBASIC30.54■■■□□ 2.48
A0A0C4DFX4 AC087741.3-201ENST00000624270 1347 ntBASIC30.54■■■□□ 2.48
A0A0C4DFX4 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC30.53■■■□□ 2.48
A0A0C4DFX4 HSD17B1P1-201ENST00000590052 955 ntBASIC30.53■■■□□ 2.48
A0A0C4DFX4 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
A0A0C4DFX4 AL391121.1-201ENST00000607967 1349 ntBASIC30.5■■■□□ 2.47
A0A0C4DFX4 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC30.45■■■□□ 2.47
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms