Protein–RNA interactions for Protein: A0A0B4J2F2

LOC102724428, SNF1-like kinase, isoform CRA_a, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC102724428A0A0B4J2F2 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC38.13■■■■□ 3.69
LOC102724428A0A0B4J2F2 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC38.11■■■■□ 3.69
LOC102724428A0A0B4J2F2 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC38.1■■■■□ 3.69
LOC102724428A0A0B4J2F2 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC38.08■■■■□ 3.69
LOC102724428A0A0B4J2F2 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC38.07■■■■□ 3.68
LOC102724428A0A0B4J2F2 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC38.06■■■■□ 3.68
LOC102724428A0A0B4J2F2 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC38.04■■■■□ 3.68
LOC102724428A0A0B4J2F2 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC38.03■■■■□ 3.68
LOC102724428A0A0B4J2F2 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC38.03■■■■□ 3.68
LOC102724428A0A0B4J2F2 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC38.03■■■■□ 3.68
LOC102724428A0A0B4J2F2 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC38.02■■■■□ 3.68
LOC102724428A0A0B4J2F2 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC38.01■■■■□ 3.68
LOC102724428A0A0B4J2F2 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC37.97■■■■□ 3.67
LOC102724428A0A0B4J2F2 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC37.96■■■■□ 3.67
LOC102724428A0A0B4J2F2 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC37.96■■■■□ 3.67
LOC102724428A0A0B4J2F2 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC37.93■■■■□ 3.66
LOC102724428A0A0B4J2F2 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC37.91■■■■□ 3.66
LOC102724428A0A0B4J2F2 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC37.88■■■■□ 3.66
LOC102724428A0A0B4J2F2 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC37.88■■■■□ 3.65
LOC102724428A0A0B4J2F2 RARRES2P7-201ENST00000567349 469 ntBASIC37.83■■■■□ 3.65
LOC102724428A0A0B4J2F2 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC37.77■■■■□ 3.64
LOC102724428A0A0B4J2F2 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC37.76■■■■□ 3.64
LOC102724428A0A0B4J2F2 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC37.75■■■■□ 3.63
LOC102724428A0A0B4J2F2 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC37.7■■■■□ 3.63
LOC102724428A0A0B4J2F2 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC37.59■■■■□ 3.61
LOC102724428A0A0B4J2F2 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC37.59■■■■□ 3.61
LOC102724428A0A0B4J2F2 EBPL-203ENST00000378270 579 ntTSL 2 BASIC37.58■■■■□ 3.61
LOC102724428A0A0B4J2F2 AC097358.2-201ENST00000607541 1159 ntBASIC37.58■■■■□ 3.61
LOC102724428A0A0B4J2F2 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC37.58■■■■□ 3.61
LOC102724428A0A0B4J2F2 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC37.57■■■■□ 3.6
LOC102724428A0A0B4J2F2 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC37.57■■■■□ 3.6
LOC102724428A0A0B4J2F2 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC37.56■■■■□ 3.6
LOC102724428A0A0B4J2F2 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC37.56■■■■□ 3.6
LOC102724428A0A0B4J2F2 AC136428.2-201ENST00000563187 214 ntBASIC37.52■■■■□ 3.6
LOC102724428A0A0B4J2F2 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC37.5■■■■□ 3.59
LOC102724428A0A0B4J2F2 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC37.5■■■■□ 3.59
LOC102724428A0A0B4J2F2 SETD8P1-201ENST00000623146 1180 ntBASIC37.47■■■■□ 3.59
LOC102724428A0A0B4J2F2 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC37.46■■■■□ 3.59
LOC102724428A0A0B4J2F2 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC37.43■■■■□ 3.58
LOC102724428A0A0B4J2F2 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC37.4■■■■□ 3.58
LOC102724428A0A0B4J2F2 KLF16-203ENST00000592313 508 ntTSL 3 BASIC37.38■■■■□ 3.57
LOC102724428A0A0B4J2F2 SUZ12P1-203ENST00000578195 985 ntBASIC37.37■■■■□ 3.57
LOC102724428A0A0B4J2F2 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC37.36■■■■□ 3.57
LOC102724428A0A0B4J2F2 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC37.34■■■■□ 3.57
LOC102724428A0A0B4J2F2 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC37.3■■■■□ 3.56
LOC102724428A0A0B4J2F2 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC37.3■■■■□ 3.56
LOC102724428A0A0B4J2F2 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC37.29■■■■□ 3.56
LOC102724428A0A0B4J2F2 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC37.29■■■■□ 3.56
LOC102724428A0A0B4J2F2 ILK-212ENST00000532063 1617 ntTSL 2 BASIC37.28■■■■□ 3.56
LOC102724428A0A0B4J2F2 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC37.28■■■■□ 3.56
LOC102724428A0A0B4J2F2 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC37.28■■■■□ 3.56
LOC102724428A0A0B4J2F2 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC37.27■■■■□ 3.56
LOC102724428A0A0B4J2F2 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC37.25■■■■□ 3.55
LOC102724428A0A0B4J2F2 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC37.25■■■■□ 3.55
LOC102724428A0A0B4J2F2 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC37.23■■■■□ 3.55
LOC102724428A0A0B4J2F2 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC37.22■■■■□ 3.55
LOC102724428A0A0B4J2F2 RPS2P35-201ENST00000443417 897 ntBASIC37.2■■■■□ 3.55
LOC102724428A0A0B4J2F2 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC37.13■■■■□ 3.53
LOC102724428A0A0B4J2F2 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC37.11■■■■□ 3.53
LOC102724428A0A0B4J2F2 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC37.1■■■■□ 3.53
LOC102724428A0A0B4J2F2 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC37.09■■■■□ 3.53
LOC102724428A0A0B4J2F2 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC37.08■■■■□ 3.53
LOC102724428A0A0B4J2F2 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC37.07■■■■□ 3.52
LOC102724428A0A0B4J2F2 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC37.07■■■■□ 3.52
LOC102724428A0A0B4J2F2 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC37.06■■■■□ 3.52
LOC102724428A0A0B4J2F2 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC37.04■■■■□ 3.52
LOC102724428A0A0B4J2F2 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC37.01■■■■□ 3.52
LOC102724428A0A0B4J2F2 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC37■■■■□ 3.51
LOC102724428A0A0B4J2F2 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC36.99■■■■□ 3.51
LOC102724428A0A0B4J2F2 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC36.93■■■■□ 3.5
LOC102724428A0A0B4J2F2 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC36.91■■■■□ 3.5
LOC102724428A0A0B4J2F2 AC145285.7-201ENST00000614819 1539 ntBASIC36.9■■■■□ 3.5
LOC102724428A0A0B4J2F2 CAHM-201ENST00000604200 896 ntBASIC36.88■■■■□ 3.49
LOC102724428A0A0B4J2F2 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC36.87■■■■□ 3.49
LOC102724428A0A0B4J2F2 MVK-208ENST00000539696 608 ntTSL 5 BASIC36.86■■■■□ 3.49
LOC102724428A0A0B4J2F2 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC36.83■■■■□ 3.49
LOC102724428A0A0B4J2F2 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC36.81■■■■□ 3.48
LOC102724428A0A0B4J2F2 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC36.81■■■■□ 3.48
LOC102724428A0A0B4J2F2 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC36.78■■■■□ 3.48
LOC102724428A0A0B4J2F2 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC36.77■■■■□ 3.48
LOC102724428A0A0B4J2F2 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC36.74■■■■□ 3.47
LOC102724428A0A0B4J2F2 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC36.73■■■■□ 3.47
LOC102724428A0A0B4J2F2 AL162393.1-201ENST00000437852 946 ntBASIC36.71■■■■□ 3.47
LOC102724428A0A0B4J2F2 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC36.7■■■■□ 3.47
LOC102724428A0A0B4J2F2 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC36.7■■■■□ 3.47
LOC102724428A0A0B4J2F2 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC36.68■■■■□ 3.46
LOC102724428A0A0B4J2F2 NRG1-221ENST00000614767 762 ntTSL 5 BASIC36.68■■■■□ 3.46
LOC102724428A0A0B4J2F2 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC36.67■■■■□ 3.46
LOC102724428A0A0B4J2F2 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC36.65■■■■□ 3.46
LOC102724428A0A0B4J2F2 AL391121.1-201ENST00000607967 1349 ntBASIC36.65■■■■□ 3.46
LOC102724428A0A0B4J2F2 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC36.64■■■■□ 3.46
LOC102724428A0A0B4J2F2 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC36.63■■■■□ 3.45
LOC102724428A0A0B4J2F2 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC36.63■■■■□ 3.45
LOC102724428A0A0B4J2F2 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC36.62■■■■□ 3.45
LOC102724428A0A0B4J2F2 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC36.62■■■■□ 3.45
LOC102724428A0A0B4J2F2 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC36.61■■■■□ 3.45
LOC102724428A0A0B4J2F2 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC36.6■■■■□ 3.45
LOC102724428A0A0B4J2F2 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC36.59■■■■□ 3.45
LOC102724428A0A0B4J2F2 AP006261.1-201ENST00000584783 668 ntBASIC36.59■■■■□ 3.45
LOC102724428A0A0B4J2F2 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC36.59■■■■□ 3.45
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms