Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC38.78■■■■□ 3.8
RIMBP3Q9UFD9 GAK-223ENST00000628912 497 ntTSL 5 BASIC38.78■■■■□ 3.8
RIMBP3Q9UFD9 PTMA-205ENST00000410064 814 ntTSL 2 BASIC38.78■■■■□ 3.8
RIMBP3Q9UFD9 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC38.77■■■■□ 3.8
RIMBP3Q9UFD9 AL031602.1-201ENST00000633169 911 ntBASIC38.77■■■■□ 3.8
RIMBP3Q9UFD9 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC38.77■■■■□ 3.8
RIMBP3Q9UFD9 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC38.76■■■■□ 3.8
RIMBP3Q9UFD9 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC38.75■■■■□ 3.79
RIMBP3Q9UFD9 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC38.75■■■■□ 3.79
RIMBP3Q9UFD9 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC38.75■■■■□ 3.79
RIMBP3Q9UFD9 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC38.75■■■■□ 3.79
RIMBP3Q9UFD9 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC38.75■■■■□ 3.79
RIMBP3Q9UFD9 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC38.74■■■■□ 3.79
RIMBP3Q9UFD9 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC38.74■■■■□ 3.79
RIMBP3Q9UFD9 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC38.74■■■■□ 3.79
RIMBP3Q9UFD9 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC38.74■■■■□ 3.79
RIMBP3Q9UFD9 VPS53-216ENST00000574029 585 ntTSL 4 BASIC38.74■■■■□ 3.79
RIMBP3Q9UFD9 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC38.74■■■■□ 3.79
RIMBP3Q9UFD9 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC38.74■■■■□ 3.79
RIMBP3Q9UFD9 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC38.73■■■■□ 3.79
RIMBP3Q9UFD9 AF131216.4-201ENST00000638924 1588 ntBASIC38.73■■■■□ 3.79
RIMBP3Q9UFD9 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC38.72■■■■□ 3.79
RIMBP3Q9UFD9 AC004448.1-201ENST00000458332 883 ntBASIC38.72■■■■□ 3.79
RIMBP3Q9UFD9 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC38.72■■■■□ 3.79
RIMBP3Q9UFD9 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC38.72■■■■□ 3.79
RIMBP3Q9UFD9 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC38.71■■■■□ 3.79
RIMBP3Q9UFD9 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC38.71■■■■□ 3.79
RIMBP3Q9UFD9 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC38.71■■■■□ 3.79
RIMBP3Q9UFD9 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC38.71■■■■□ 3.79
RIMBP3Q9UFD9 GATM-206ENST00000558336 1522 ntTSL 2 BASIC38.71■■■■□ 3.79
RIMBP3Q9UFD9 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC38.71■■■■□ 3.79
RIMBP3Q9UFD9 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC38.71■■■■□ 3.79
RIMBP3Q9UFD9 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC38.7■■■■□ 3.79
RIMBP3Q9UFD9 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC38.69■■■■□ 3.78
RIMBP3Q9UFD9 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC38.69■■■■□ 3.78
RIMBP3Q9UFD9 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC38.68■■■■□ 3.78
RIMBP3Q9UFD9 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC38.68■■■■□ 3.78
RIMBP3Q9UFD9 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC38.67■■■■□ 3.78
RIMBP3Q9UFD9 SNX5-217ENST00000606557 1087 ntBASIC38.67■■■■□ 3.78
RIMBP3Q9UFD9 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC38.67■■■■□ 3.78
RIMBP3Q9UFD9 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC38.67■■■■□ 3.78
RIMBP3Q9UFD9 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC38.66■■■■□ 3.78
RIMBP3Q9UFD9 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC38.66■■■■□ 3.78
RIMBP3Q9UFD9 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC38.65■■■■□ 3.78
RIMBP3Q9UFD9 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC38.65■■■■□ 3.78
RIMBP3Q9UFD9 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC38.64■■■■□ 3.78
RIMBP3Q9UFD9 DUX4L2-201ENST00000561772 1275 ntBASIC38.64■■■■□ 3.78
RIMBP3Q9UFD9 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC38.64■■■■□ 3.78
RIMBP3Q9UFD9 DUX4L6-201ENST00000626483 1275 ntBASIC38.64■■■■□ 3.78
RIMBP3Q9UFD9 DUX4L1-201ENST00000627662 1275 ntBASIC38.64■■■■□ 3.78
RIMBP3Q9UFD9 DUX4L8-201ENST00000629013 1275 ntBASIC38.64■■■■□ 3.78
RIMBP3Q9UFD9 DUX4L3-201ENST00000630187 1275 ntBASIC38.64■■■■□ 3.78
RIMBP3Q9UFD9 DUX4L7-201ENST00000630678 1275 ntBASIC38.64■■■■□ 3.78
RIMBP3Q9UFD9 DUX4L5-201ENST00000630834 1275 ntBASIC38.64■■■■□ 3.78
RIMBP3Q9UFD9 AC066615.1-201ENST00000640911 628 ntBASIC38.64■■■■□ 3.78
RIMBP3Q9UFD9 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC38.64■■■■□ 3.78
RIMBP3Q9UFD9 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC38.63■■■■□ 3.78
RIMBP3Q9UFD9 DUX4L19-201ENST00000557448 1267 ntBASIC38.63■■■■□ 3.78
RIMBP3Q9UFD9 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC38.63■■■■□ 3.78
RIMBP3Q9UFD9 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC38.63■■■■□ 3.78
RIMBP3Q9UFD9 AP002414.2-202ENST00000590929 1450 ntBASIC38.63■■■■□ 3.77
RIMBP3Q9UFD9 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC38.63■■■■□ 3.77
RIMBP3Q9UFD9 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC38.63■■■■□ 3.77
RIMBP3Q9UFD9 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC38.63■■■■□ 3.77
RIMBP3Q9UFD9 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC38.63■■■■□ 3.77
RIMBP3Q9UFD9 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC38.62■■■■□ 3.77
RIMBP3Q9UFD9 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC38.61■■■■□ 3.77
RIMBP3Q9UFD9 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC38.6■■■■□ 3.77
RIMBP3Q9UFD9 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC38.6■■■■□ 3.77
RIMBP3Q9UFD9 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC38.6■■■■□ 3.77
RIMBP3Q9UFD9 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC38.6■■■■□ 3.77
RIMBP3Q9UFD9 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC38.59■■■■□ 3.77
RIMBP3Q9UFD9 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC38.59■■■■□ 3.77
RIMBP3Q9UFD9 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC38.58■■■■□ 3.77
RIMBP3Q9UFD9 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC38.58■■■■□ 3.77
RIMBP3Q9UFD9 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC38.58■■■■□ 3.77
RIMBP3Q9UFD9 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC38.58■■■■□ 3.77
RIMBP3Q9UFD9 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC38.57■■■■□ 3.77
RIMBP3Q9UFD9 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC38.57■■■■□ 3.77
RIMBP3Q9UFD9 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC38.57■■■■□ 3.77
RIMBP3Q9UFD9 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC38.57■■■■□ 3.77
RIMBP3Q9UFD9 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC38.57■■■■□ 3.77
RIMBP3Q9UFD9 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC38.57■■■■□ 3.76
RIMBP3Q9UFD9 AK1-201ENST00000223836 736 ntTSL 3 BASIC38.56■■■■□ 3.76
RIMBP3Q9UFD9 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC38.56■■■■□ 3.76
RIMBP3Q9UFD9 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC38.56■■■■□ 3.76
RIMBP3Q9UFD9 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC38.56■■■■□ 3.76
RIMBP3Q9UFD9 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC38.55■■■■□ 3.76
RIMBP3Q9UFD9 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC38.55■■■■□ 3.76
RIMBP3Q9UFD9 AC099791.1-201ENST00000416440 715 ntBASIC38.54■■■■□ 3.76
RIMBP3Q9UFD9 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC38.54■■■■□ 3.76
RIMBP3Q9UFD9 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC38.54■■■■□ 3.76
RIMBP3Q9UFD9 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC38.54■■■■□ 3.76
RIMBP3Q9UFD9 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC38.53■■■■□ 3.76
RIMBP3Q9UFD9 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC38.53■■■■□ 3.76
RIMBP3Q9UFD9 EMC9-206ENST00000560403 872 ntTSL 2 BASIC38.53■■■■□ 3.76
RIMBP3Q9UFD9 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC38.52■■■■□ 3.76
RIMBP3Q9UFD9 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC38.52■■■■□ 3.76
RIMBP3Q9UFD9 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC38.52■■■■□ 3.76
RIMBP3Q9UFD9 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC38.51■■■■□ 3.76
Retrieved 100 of 98,524 protein–RNA pairs in 148.8 ms