Protein–RNA interactions for Protein: Q8NC44

RETREG2, Reticulophagy regulator 2, humanhuman

Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG2Q8NC44 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC26.77■■□□□ 1.88
RETREG2Q8NC44 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC26.76■■□□□ 1.88
RETREG2Q8NC44 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC26.76■■□□□ 1.87
RETREG2Q8NC44 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
RETREG2Q8NC44 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC26.76■■□□□ 1.87
RETREG2Q8NC44 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
RETREG2Q8NC44 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC26.75■■□□□ 1.87
RETREG2Q8NC44 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
RETREG2Q8NC44 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC26.75■■□□□ 1.87
RETREG2Q8NC44 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
RETREG2Q8NC44 BX664725.1-201ENST00000438252 379 ntBASIC26.75■■□□□ 1.87
RETREG2Q8NC44 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
RETREG2Q8NC44 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC26.75■■□□□ 1.87
RETREG2Q8NC44 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
RETREG2Q8NC44 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC26.74■■□□□ 1.87
RETREG2Q8NC44 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
RETREG2Q8NC44 AC022616.5-201ENST00000518796 181 ntBASIC26.74■■□□□ 1.87
RETREG2Q8NC44 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC26.74■■□□□ 1.87
RETREG2Q8NC44 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
RETREG2Q8NC44 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
RETREG2Q8NC44 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
RETREG2Q8NC44 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC26.73■■□□□ 1.87
RETREG2Q8NC44 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC26.73■■□□□ 1.87
RETREG2Q8NC44 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
RETREG2Q8NC44 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC26.73■■□□□ 1.87
RETREG2Q8NC44 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC26.73■■□□□ 1.87
RETREG2Q8NC44 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC26.73■■□□□ 1.87
RETREG2Q8NC44 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC26.73■■□□□ 1.87
RETREG2Q8NC44 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC26.73■■□□□ 1.87
RETREG2Q8NC44 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC26.73■■□□□ 1.87
RETREG2Q8NC44 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC26.72■■□□□ 1.87
RETREG2Q8NC44 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC26.72■■□□□ 1.87
RETREG2Q8NC44 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC26.72■■□□□ 1.87
RETREG2Q8NC44 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC26.72■■□□□ 1.87
RETREG2Q8NC44 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
RETREG2Q8NC44 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC26.72■■□□□ 1.87
RETREG2Q8NC44 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
RETREG2Q8NC44 MIR4787-201ENST00000607364 84 ntBASIC26.72■■□□□ 1.87
RETREG2Q8NC44 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC26.71■■□□□ 1.87
RETREG2Q8NC44 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
RETREG2Q8NC44 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC26.71■■□□□ 1.87
RETREG2Q8NC44 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
RETREG2Q8NC44 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC26.71■■□□□ 1.87
RETREG2Q8NC44 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC26.71■■□□□ 1.87
RETREG2Q8NC44 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
RETREG2Q8NC44 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC26.71■■□□□ 1.87
RETREG2Q8NC44 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC26.7■■□□□ 1.87
RETREG2Q8NC44 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
RETREG2Q8NC44 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC26.7■■□□□ 1.86
RETREG2Q8NC44 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC26.7■■□□□ 1.86
RETREG2Q8NC44 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC26.69■■□□□ 1.86
RETREG2Q8NC44 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
RETREG2Q8NC44 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC26.69■■□□□ 1.86
RETREG2Q8NC44 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
RETREG2Q8NC44 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
RETREG2Q8NC44 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
RETREG2Q8NC44 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC26.68■■□□□ 1.86
RETREG2Q8NC44 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
RETREG2Q8NC44 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
RETREG2Q8NC44 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
RETREG2Q8NC44 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
RETREG2Q8NC44 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC26.67■■□□□ 1.86
RETREG2Q8NC44 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
RETREG2Q8NC44 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC26.67■■□□□ 1.86
RETREG2Q8NC44 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC26.67■■□□□ 1.86
RETREG2Q8NC44 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
RETREG2Q8NC44 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC26.66■■□□□ 1.86
RETREG2Q8NC44 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC26.66■■□□□ 1.86
RETREG2Q8NC44 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC26.66■■□□□ 1.86
RETREG2Q8NC44 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
RETREG2Q8NC44 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
RETREG2Q8NC44 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC26.65■■□□□ 1.86
RETREG2Q8NC44 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC26.65■■□□□ 1.86
RETREG2Q8NC44 LSM7-203ENST00000585409 512 ntTSL 2 BASIC26.65■■□□□ 1.86
RETREG2Q8NC44 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
RETREG2Q8NC44 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
RETREG2Q8NC44 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC26.65■■□□□ 1.86
RETREG2Q8NC44 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
RETREG2Q8NC44 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC26.64■■□□□ 1.86
RETREG2Q8NC44 KRT18P24-201ENST00000344739 1156 ntBASIC26.64■■□□□ 1.86
RETREG2Q8NC44 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC26.64■■□□□ 1.86
RETREG2Q8NC44 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC26.64■■□□□ 1.86
RETREG2Q8NC44 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC26.64■■□□□ 1.86
RETREG2Q8NC44 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC26.64■■□□□ 1.85
RETREG2Q8NC44 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
RETREG2Q8NC44 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC26.63■■□□□ 1.85
RETREG2Q8NC44 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC26.63■■□□□ 1.85
RETREG2Q8NC44 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC26.63■■□□□ 1.85
RETREG2Q8NC44 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC26.63■■□□□ 1.85
RETREG2Q8NC44 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC26.62■■□□□ 1.85
RETREG2Q8NC44 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
RETREG2Q8NC44 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC26.62■■□□□ 1.85
RETREG2Q8NC44 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC26.62■■□□□ 1.85
RETREG2Q8NC44 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC26.62■■□□□ 1.85
RETREG2Q8NC44 KRT16P3-201ENST00000439127 1283 ntBASIC26.62■■□□□ 1.85
RETREG2Q8NC44 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC26.62■■□□□ 1.85
RETREG2Q8NC44 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
RETREG2Q8NC44 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
RETREG2Q8NC44 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
RETREG2Q8NC44 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms