Protein–RNA interactions for Protein: Q8N684

CPSF7, Cleavage and polyadenylation specificity factor subunit 7, humanhuman

Known RBP Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7Q8N684 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
CPSF7Q8N684 CASK-201ENST00000378154 2494 ntTSL 5 BASIC23■■□□□ 1.27
CPSF7Q8N684 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
CPSF7Q8N684 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
CPSF7Q8N684 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC23■■□□□ 1.27
CPSF7Q8N684 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
CPSF7Q8N684 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
CPSF7Q8N684 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
CPSF7Q8N684 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC22.99■■□□□ 1.27
CPSF7Q8N684 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC22.99■■□□□ 1.27
CPSF7Q8N684 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC22.99■■□□□ 1.27
CPSF7Q8N684 AL359258.2-201ENST00000564063 1566 ntBASIC22.99■■□□□ 1.27
CPSF7Q8N684 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
CPSF7Q8N684 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC22.99■■□□□ 1.27
CPSF7Q8N684 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
CPSF7Q8N684 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
CPSF7Q8N684 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
CPSF7Q8N684 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC22.98■■□□□ 1.27
CPSF7Q8N684 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC22.98■■□□□ 1.27
CPSF7Q8N684 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
CPSF7Q8N684 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
CPSF7Q8N684 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
CPSF7Q8N684 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC22.97■■□□□ 1.27
CPSF7Q8N684 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC22.97■■□□□ 1.27
CPSF7Q8N684 AC068473.5-201ENST00000616428 2072 ntBASIC22.97■■□□□ 1.27
CPSF7Q8N684 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
CPSF7Q8N684 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC22.97■■□□□ 1.27
CPSF7Q8N684 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC22.97■■□□□ 1.27
CPSF7Q8N684 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
CPSF7Q8N684 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
CPSF7Q8N684 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
CPSF7Q8N684 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC22.96■■□□□ 1.27
CPSF7Q8N684 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
CPSF7Q8N684 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC22.96■■□□□ 1.27
CPSF7Q8N684 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
CPSF7Q8N684 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
CPSF7Q8N684 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
CPSF7Q8N684 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
CPSF7Q8N684 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
CPSF7Q8N684 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
CPSF7Q8N684 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC22.95■■□□□ 1.26
CPSF7Q8N684 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
CPSF7Q8N684 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC22.95■■□□□ 1.26
CPSF7Q8N684 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
CPSF7Q8N684 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC22.95■■□□□ 1.26
CPSF7Q8N684 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC22.95■■□□□ 1.26
CPSF7Q8N684 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC22.94■■□□□ 1.26
CPSF7Q8N684 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC22.94■■□□□ 1.26
CPSF7Q8N684 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC22.94■■□□□ 1.26
CPSF7Q8N684 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
CPSF7Q8N684 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC22.94■■□□□ 1.26
CPSF7Q8N684 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC22.94■■□□□ 1.26
CPSF7Q8N684 MED25-210ENST00000612854 801 ntTSL 5 BASIC22.94■■□□□ 1.26
CPSF7Q8N684 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
CPSF7Q8N684 MED25-214ENST00000622402 642 ntTSL 5 BASIC22.94■■□□□ 1.26
CPSF7Q8N684 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC22.93■■□□□ 1.26
CPSF7Q8N684 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
CPSF7Q8N684 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
CPSF7Q8N684 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
CPSF7Q8N684 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
CPSF7Q8N684 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC22.93■■□□□ 1.26
CPSF7Q8N684 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
CPSF7Q8N684 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC22.93■■□□□ 1.26
CPSF7Q8N684 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC22.93■■□□□ 1.26
CPSF7Q8N684 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC22.93■■□□□ 1.26
CPSF7Q8N684 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
CPSF7Q8N684 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
CPSF7Q8N684 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC22.92■■□□□ 1.26
CPSF7Q8N684 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
CPSF7Q8N684 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
CPSF7Q8N684 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC22.92■■□□□ 1.26
CPSF7Q8N684 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC22.92■■□□□ 1.26
CPSF7Q8N684 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
CPSF7Q8N684 AC126177.7-201ENST00000547904 679 ntBASIC22.92■■□□□ 1.26
CPSF7Q8N684 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
CPSF7Q8N684 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC22.92■■□□□ 1.26
CPSF7Q8N684 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
CPSF7Q8N684 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
CPSF7Q8N684 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC22.91■■□□□ 1.26
CPSF7Q8N684 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC22.91■■□□□ 1.26
CPSF7Q8N684 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
CPSF7Q8N684 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
CPSF7Q8N684 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC22.91■■□□□ 1.26
CPSF7Q8N684 AC092296.2-201ENST00000589470 999 ntBASIC22.91■■□□□ 1.26
CPSF7Q8N684 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC22.91■■□□□ 1.26
CPSF7Q8N684 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC22.91■■□□□ 1.26
CPSF7Q8N684 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC22.91■■□□□ 1.26
CPSF7Q8N684 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
CPSF7Q8N684 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC22.9■■□□□ 1.26
CPSF7Q8N684 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC22.9■■□□□ 1.26
CPSF7Q8N684 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
CPSF7Q8N684 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
CPSF7Q8N684 NTF6A-201ENST00000591175 560 ntBASIC22.9■■□□□ 1.26
CPSF7Q8N684 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC22.9■■□□□ 1.26
CPSF7Q8N684 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC22.9■■□□□ 1.26
CPSF7Q8N684 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
CPSF7Q8N684 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC22.89■■□□□ 1.25
CPSF7Q8N684 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC22.89■■□□□ 1.25
CPSF7Q8N684 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
CPSF7Q8N684 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC22.89■■□□□ 1.25
Retrieved 100 of 98,524 protein–RNA pairs in 110 ms