Protein–RNA interactions for Protein: Q8N271

PROM2, Prominin-2, humanhuman

Predictions only

Length 834 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM2Q8N271 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC30.74■■■□□ 2.51
PROM2Q8N271 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
PROM2Q8N271 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
PROM2Q8N271 GLI3-203ENST00000437480 451 ntTSL 2 BASIC30.73■■■□□ 2.51
PROM2Q8N271 STOX2-205ENST00000513034 807 ntTSL 3 BASIC30.73■■■□□ 2.51
PROM2Q8N271 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC30.73■■■□□ 2.51
PROM2Q8N271 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
PROM2Q8N271 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
PROM2Q8N271 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
PROM2Q8N271 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
PROM2Q8N271 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
PROM2Q8N271 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
PROM2Q8N271 AF213884.3-201ENST00000563833 479 ntBASIC30.71■■■□□ 2.51
PROM2Q8N271 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC30.71■■■□□ 2.51
PROM2Q8N271 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
PROM2Q8N271 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
PROM2Q8N271 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC30.71■■■□□ 2.51
PROM2Q8N271 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC30.7■■■□□ 2.51
PROM2Q8N271 MIR939-201ENST00000401314 82 ntBASIC30.7■■■□□ 2.51
PROM2Q8N271 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC30.7■■■□□ 2.51
PROM2Q8N271 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.5
PROM2Q8N271 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
PROM2Q8N271 PLD4-205ENST00000553861 667 ntTSL 2 BASIC30.69■■■□□ 2.5
PROM2Q8N271 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC30.68■■■□□ 2.5
PROM2Q8N271 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC30.68■■■□□ 2.5
PROM2Q8N271 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC30.68■■■□□ 2.5
PROM2Q8N271 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC30.68■■■□□ 2.5
PROM2Q8N271 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
PROM2Q8N271 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC30.68■■■□□ 2.5
PROM2Q8N271 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC30.67■■■□□ 2.5
PROM2Q8N271 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
PROM2Q8N271 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC30.67■■■□□ 2.5
PROM2Q8N271 BX255925.1-201ENST00000566954 1854 ntBASIC30.67■■■□□ 2.5
PROM2Q8N271 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC30.67■■■□□ 2.5
PROM2Q8N271 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
PROM2Q8N271 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
PROM2Q8N271 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
PROM2Q8N271 GRAMD4P4-201ENST00000613563 1115 ntBASIC30.66■■■□□ 2.5
PROM2Q8N271 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC30.65■■■□□ 2.5
PROM2Q8N271 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
PROM2Q8N271 PROC-203ENST00000409048 1586 ntTSL 5 BASIC30.64■■■□□ 2.5
PROM2Q8N271 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC30.64■■■□□ 2.5
PROM2Q8N271 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
PROM2Q8N271 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
PROM2Q8N271 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC30.63■■■□□ 2.49
PROM2Q8N271 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
PROM2Q8N271 AP001330.3-201ENST00000520123 633 ntBASIC30.63■■■□□ 2.49
PROM2Q8N271 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
PROM2Q8N271 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
PROM2Q8N271 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC30.61■■■□□ 2.49
PROM2Q8N271 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
PROM2Q8N271 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC30.61■■■□□ 2.49
PROM2Q8N271 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
PROM2Q8N271 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC30.61■■■□□ 2.49
PROM2Q8N271 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC30.61■■■□□ 2.49
PROM2Q8N271 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
PROM2Q8N271 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC30.6■■■□□ 2.49
PROM2Q8N271 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
PROM2Q8N271 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC30.6■■■□□ 2.49
PROM2Q8N271 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
PROM2Q8N271 MIR6722-201ENST00000617286 78 ntBASIC30.6■■■□□ 2.49
PROM2Q8N271 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC30.59■■■□□ 2.49
PROM2Q8N271 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
PROM2Q8N271 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
PROM2Q8N271 AC090192.1-201ENST00000517740 490 ntBASIC30.59■■■□□ 2.49
PROM2Q8N271 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC30.59■■■□□ 2.49
PROM2Q8N271 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
PROM2Q8N271 SNX5-217ENST00000606557 1087 ntBASIC30.59■■■□□ 2.49
PROM2Q8N271 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC30.59■■■□□ 2.49
PROM2Q8N271 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC30.59■■■□□ 2.49
PROM2Q8N271 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
PROM2Q8N271 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
PROM2Q8N271 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC30.58■■■□□ 2.49
PROM2Q8N271 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC30.58■■■□□ 2.49
PROM2Q8N271 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
PROM2Q8N271 SRD5A1P1-201ENST00000442297 786 ntBASIC30.58■■■□□ 2.49
PROM2Q8N271 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC30.58■■■□□ 2.49
PROM2Q8N271 RARRES2P11-201ENST00000635158 484 ntBASIC30.58■■■□□ 2.49
PROM2Q8N271 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC30.58■■■□□ 2.49
PROM2Q8N271 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC30.57■■■□□ 2.48
PROM2Q8N271 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC30.57■■■□□ 2.48
PROM2Q8N271 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC30.57■■■□□ 2.48
PROM2Q8N271 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC30.57■■■□□ 2.48
PROM2Q8N271 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC30.57■■■□□ 2.48
PROM2Q8N271 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC30.57■■■□□ 2.48
PROM2Q8N271 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
PROM2Q8N271 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
PROM2Q8N271 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
PROM2Q8N271 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC30.55■■■□□ 2.48
PROM2Q8N271 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC30.55■■■□□ 2.48
PROM2Q8N271 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC30.54■■■□□ 2.48
PROM2Q8N271 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC30.53■■■□□ 2.48
PROM2Q8N271 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC30.53■■■□□ 2.48
PROM2Q8N271 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC30.53■■■□□ 2.48
PROM2Q8N271 AC091305.1-201ENST00000479476 895 ntBASIC30.53■■■□□ 2.48
PROM2Q8N271 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC30.53■■■□□ 2.48
PROM2Q8N271 ST7-205ENST00000393446 2114 ntTSL 5 BASIC30.52■■■□□ 2.48
PROM2Q8N271 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
PROM2Q8N271 GATM-206ENST00000558336 1522 ntTSL 2 BASIC30.52■■■□□ 2.48
PROM2Q8N271 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC30.51■■■□□ 2.48
Retrieved 100 of 98,524 protein–RNA pairs in 62.1 ms