Protein–RNA interactions for Protein: P31025

LCN1, Lipocalin-1, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCN1P31025 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC21.76■■□□□ 1.07
LCN1P31025 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC21.76■■□□□ 1.07
LCN1P31025 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
LCN1P31025 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
LCN1P31025 SLC6A10P-202ENST00000431994 2058 ntBASIC21.75■■□□□ 1.07
LCN1P31025 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
LCN1P31025 ATP5G2P3-201ENST00000429083 425 ntBASIC21.75■■□□□ 1.07
LCN1P31025 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
LCN1P31025 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC21.75■■□□□ 1.07
LCN1P31025 AC019171.1-201ENST00000601251 1056 ntBASIC21.75■■□□□ 1.07
LCN1P31025 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
LCN1P31025 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
LCN1P31025 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
LCN1P31025 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
LCN1P31025 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
LCN1P31025 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
LCN1P31025 AC074183.2-201ENST00000623112 922 ntBASIC21.74■■□□□ 1.07
LCN1P31025 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC21.74■■□□□ 1.07
LCN1P31025 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
LCN1P31025 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC21.74■■□□□ 1.07
LCN1P31025 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
LCN1P31025 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
LCN1P31025 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
LCN1P31025 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
LCN1P31025 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC21.74■■□□□ 1.07
LCN1P31025 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
LCN1P31025 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
LCN1P31025 FOXO3B-201ENST00000395675 1928 ntBASIC21.73■■□□□ 1.07
LCN1P31025 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
LCN1P31025 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
LCN1P31025 TSPY13P-201ENST00000338964 914 ntBASIC21.73■■□□□ 1.07
LCN1P31025 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
LCN1P31025 AC004987.1-201ENST00000428627 508 ntBASIC21.73■■□□□ 1.07
LCN1P31025 LONRF2P2-201ENST00000439212 571 ntBASIC21.73■■□□□ 1.07
LCN1P31025 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
LCN1P31025 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
LCN1P31025 AC012354.3-201ENST00000623734 483 ntBASIC21.73■■□□□ 1.07
LCN1P31025 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
LCN1P31025 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
LCN1P31025 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
LCN1P31025 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
LCN1P31025 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC21.72■■□□□ 1.07
LCN1P31025 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
LCN1P31025 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
LCN1P31025 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC21.72■■□□□ 1.07
LCN1P31025 MTX2-204ENST00000443241 799 ntTSL 3 BASIC21.72■■□□□ 1.07
LCN1P31025 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC21.72■■□□□ 1.07
LCN1P31025 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
LCN1P31025 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
LCN1P31025 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
LCN1P31025 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC21.72■■□□□ 1.07
LCN1P31025 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
LCN1P31025 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
LCN1P31025 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC21.71■■□□□ 1.07
LCN1P31025 AL592295.1-201ENST00000400984 884 ntBASIC21.71■■□□□ 1.07
LCN1P31025 AC139795.1-202ENST00000500444 432 ntBASIC21.71■■□□□ 1.07
LCN1P31025 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC21.71■■□□□ 1.07
LCN1P31025 MIR6089-201ENST00000616698 64 ntBASIC21.71■■□□□ 1.07
LCN1P31025 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC21.71■■□□□ 1.07
LCN1P31025 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
LCN1P31025 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC21.7■■□□□ 1.07
LCN1P31025 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
LCN1P31025 AC022211.4-201ENST00000625094 2161 ntBASIC21.7■■□□□ 1.06
LCN1P31025 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
LCN1P31025 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
LCN1P31025 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
LCN1P31025 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
LCN1P31025 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
LCN1P31025 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
LCN1P31025 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
LCN1P31025 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
LCN1P31025 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
LCN1P31025 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC21.69■■□□□ 1.06
LCN1P31025 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
LCN1P31025 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
LCN1P31025 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
LCN1P31025 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC21.69■■□□□ 1.06
LCN1P31025 AP003733.4-201ENST00000623785 1697 ntBASIC21.69■■□□□ 1.06
LCN1P31025 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
LCN1P31025 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
LCN1P31025 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
LCN1P31025 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
LCN1P31025 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC21.68■■□□□ 1.06
LCN1P31025 AC022616.5-201ENST00000518796 181 ntBASIC21.68■■□□□ 1.06
LCN1P31025 DUX4L18-201ENST00000553347 1267 ntBASIC21.68■■□□□ 1.06
LCN1P31025 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
LCN1P31025 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC21.68■■□□□ 1.06
LCN1P31025 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
LCN1P31025 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
LCN1P31025 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
LCN1P31025 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC21.68■■□□□ 1.06
LCN1P31025 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC21.68■■□□□ 1.06
LCN1P31025 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC21.68■■□□□ 1.06
LCN1P31025 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
LCN1P31025 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC21.67■■□□□ 1.06
LCN1P31025 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC21.67■■□□□ 1.06
LCN1P31025 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC21.67■■□□□ 1.06
LCN1P31025 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
LCN1P31025 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC21.67■■□□□ 1.06
LCN1P31025 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms