Protein–RNA interactions for Protein: P0C7X3

CCNYL3, Putative cyclin-Y-like protein 3, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNYL3P0C7X3 KRT18P24-201ENST00000344739 1156 ntBASIC22.65■■□□□ 1.22
CCNYL3P0C7X3 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CCNYL3P0C7X3 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC22.65■■□□□ 1.22
CCNYL3P0C7X3 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC22.65■■□□□ 1.22
CCNYL3P0C7X3 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC22.65■■□□□ 1.22
CCNYL3P0C7X3 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC22.64■■□□□ 1.22
CCNYL3P0C7X3 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC22.64■■□□□ 1.21
CCNYL3P0C7X3 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
CCNYL3P0C7X3 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
CCNYL3P0C7X3 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC22.64■■□□□ 1.21
CCNYL3P0C7X3 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC22.64■■□□□ 1.21
CCNYL3P0C7X3 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC22.63■■□□□ 1.21
CCNYL3P0C7X3 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
CCNYL3P0C7X3 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC22.63■■□□□ 1.21
CCNYL3P0C7X3 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC22.63■■□□□ 1.21
CCNYL3P0C7X3 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CCNYL3P0C7X3 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CCNYL3P0C7X3 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
CCNYL3P0C7X3 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CCNYL3P0C7X3 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC22.62■■□□□ 1.21
CCNYL3P0C7X3 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
CCNYL3P0C7X3 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
CCNYL3P0C7X3 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC22.62■■□□□ 1.21
CCNYL3P0C7X3 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC22.62■■□□□ 1.21
CCNYL3P0C7X3 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC22.62■■□□□ 1.21
CCNYL3P0C7X3 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
CCNYL3P0C7X3 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
CCNYL3P0C7X3 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
CCNYL3P0C7X3 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
CCNYL3P0C7X3 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
CCNYL3P0C7X3 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC22.61■■□□□ 1.21
CCNYL3P0C7X3 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC22.61■■□□□ 1.21
CCNYL3P0C7X3 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
CCNYL3P0C7X3 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC22.6■■□□□ 1.21
CCNYL3P0C7X3 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
CCNYL3P0C7X3 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC22.6■■□□□ 1.21
CCNYL3P0C7X3 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC22.6■■□□□ 1.21
CCNYL3P0C7X3 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
CCNYL3P0C7X3 MIR4787-201ENST00000607364 84 ntBASIC22.6■■□□□ 1.21
CCNYL3P0C7X3 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
CCNYL3P0C7X3 DUSP8P4-201ENST00000399538 1761 ntBASIC22.6■■□□□ 1.21
CCNYL3P0C7X3 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC22.6■■□□□ 1.21
CCNYL3P0C7X3 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC22.6■■□□□ 1.21
CCNYL3P0C7X3 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC22.6■■□□□ 1.21
CCNYL3P0C7X3 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
CCNYL3P0C7X3 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
CCNYL3P0C7X3 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC22.59■■□□□ 1.21
CCNYL3P0C7X3 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC22.59■■□□□ 1.21
CCNYL3P0C7X3 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC22.59■■□□□ 1.21
CCNYL3P0C7X3 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC22.58■■□□□ 1.21
CCNYL3P0C7X3 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.21
CCNYL3P0C7X3 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
CCNYL3P0C7X3 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC22.58■■□□□ 1.21
CCNYL3P0C7X3 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
CCNYL3P0C7X3 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC22.58■■□□□ 1.21
CCNYL3P0C7X3 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC22.58■■□□□ 1.21
CCNYL3P0C7X3 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
CCNYL3P0C7X3 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CCNYL3P0C7X3 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC22.57■■□□□ 1.2
CCNYL3P0C7X3 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CCNYL3P0C7X3 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CCNYL3P0C7X3 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
CCNYL3P0C7X3 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC22.57■■□□□ 1.2
CCNYL3P0C7X3 CREM-229ENST00000474362 1030 ntTSL 2 BASIC22.57■■□□□ 1.2
CCNYL3P0C7X3 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC22.57■■□□□ 1.2
CCNYL3P0C7X3 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
CCNYL3P0C7X3 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
CCNYL3P0C7X3 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC22.57■■□□□ 1.2
CCNYL3P0C7X3 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC22.57■■□□□ 1.2
CCNYL3P0C7X3 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
CCNYL3P0C7X3 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC22.56■■□□□ 1.2
CCNYL3P0C7X3 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
CCNYL3P0C7X3 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CCNYL3P0C7X3 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
CCNYL3P0C7X3 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CCNYL3P0C7X3 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CCNYL3P0C7X3 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
CCNYL3P0C7X3 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CCNYL3P0C7X3 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
CCNYL3P0C7X3 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CCNYL3P0C7X3 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC22.56■■□□□ 1.2
CCNYL3P0C7X3 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
CCNYL3P0C7X3 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CCNYL3P0C7X3 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC22.55■■□□□ 1.2
CCNYL3P0C7X3 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC22.55■■□□□ 1.2
CCNYL3P0C7X3 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC22.55■■□□□ 1.2
CCNYL3P0C7X3 GRAMD4P7-201ENST00000578182 1232 ntBASIC22.55■■□□□ 1.2
CCNYL3P0C7X3 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC22.55■■□□□ 1.2
CCNYL3P0C7X3 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
CCNYL3P0C7X3 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
CCNYL3P0C7X3 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
CCNYL3P0C7X3 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CCNYL3P0C7X3 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
CCNYL3P0C7X3 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CCNYL3P0C7X3 AC120024.1-201ENST00000562672 995 ntBASIC22.54■■□□□ 1.2
CCNYL3P0C7X3 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC22.54■■□□□ 1.2
CCNYL3P0C7X3 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CCNYL3P0C7X3 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC22.54■■□□□ 1.2
CCNYL3P0C7X3 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CCNYL3P0C7X3 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 69.9 ms