Protein–RNA interactions for Protein: A0A0B4J241

TRAV13-1, T-cell receptor alpha variable 13-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-1A0A0B4J241 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TRAV13-1A0A0B4J241 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRAV13-1A0A0B4J241 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRAV13-1A0A0B4J241 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC16.32■□□□□ 0.2
TRAV13-1A0A0B4J241 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRAV13-1A0A0B4J241 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRAV13-1A0A0B4J241 RPS2P35-201ENST00000443417 897 ntBASIC16.32■□□□□ 0.2
TRAV13-1A0A0B4J241 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRAV13-1A0A0B4J241 AC126177.7-201ENST00000547904 679 ntBASIC16.32■□□□□ 0.2
TRAV13-1A0A0B4J241 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TRAV13-1A0A0B4J241 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC16.32■□□□□ 0.2
TRAV13-1A0A0B4J241 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC16.32■□□□□ 0.2
TRAV13-1A0A0B4J241 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRAV13-1A0A0B4J241 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRAV13-1A0A0B4J241 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
TRAV13-1A0A0B4J241 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC16.31■□□□□ 0.2
TRAV13-1A0A0B4J241 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRAV13-1A0A0B4J241 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRAV13-1A0A0B4J241 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRAV13-1A0A0B4J241 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRAV13-1A0A0B4J241 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
TRAV13-1A0A0B4J241 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC16.31■□□□□ 0.2
TRAV13-1A0A0B4J241 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
TRAV13-1A0A0B4J241 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC16.3■□□□□ 0.2
TRAV13-1A0A0B4J241 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC16.3■□□□□ 0.2
TRAV13-1A0A0B4J241 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRAV13-1A0A0B4J241 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRAV13-1A0A0B4J241 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRAV13-1A0A0B4J241 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
TRAV13-1A0A0B4J241 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TRAV13-1A0A0B4J241 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRAV13-1A0A0B4J241 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRAV13-1A0A0B4J241 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRAV13-1A0A0B4J241 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRAV13-1A0A0B4J241 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
TRAV13-1A0A0B4J241 EED-207ENST00000528180 1745 ntTSL 5 BASIC16.3■□□□□ 0.2
TRAV13-1A0A0B4J241 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TRAV13-1A0A0B4J241 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
TRAV13-1A0A0B4J241 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TRAV13-1A0A0B4J241 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRAV13-1A0A0B4J241 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
TRAV13-1A0A0B4J241 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
TRAV13-1A0A0B4J241 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TRAV13-1A0A0B4J241 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
TRAV13-1A0A0B4J241 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRAV13-1A0A0B4J241 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRAV13-1A0A0B4J241 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
TRAV13-1A0A0B4J241 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRAV13-1A0A0B4J241 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRAV13-1A0A0B4J241 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRAV13-1A0A0B4J241 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRAV13-1A0A0B4J241 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC16.29■□□□□ 0.2
TRAV13-1A0A0B4J241 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
TRAV13-1A0A0B4J241 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TRAV13-1A0A0B4J241 SLC6A10P-202ENST00000431994 2058 ntBASIC16.28■□□□□ 0.2
TRAV13-1A0A0B4J241 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC16.28■□□□□ 0.2
TRAV13-1A0A0B4J241 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TRAV13-1A0A0B4J241 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TRAV13-1A0A0B4J241 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRAV13-1A0A0B4J241 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRAV13-1A0A0B4J241 MED25-210ENST00000612854 801 ntTSL 5 BASIC16.28■□□□□ 0.2
TRAV13-1A0A0B4J241 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TRAV13-1A0A0B4J241 MED25-214ENST00000622402 642 ntTSL 5 BASIC16.28■□□□□ 0.2
TRAV13-1A0A0B4J241 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRAV13-1A0A0B4J241 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC16.28■□□□□ 0.2
TRAV13-1A0A0B4J241 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TRAV13-1A0A0B4J241 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC16.28■□□□□ 0.2
TRAV13-1A0A0B4J241 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRAV13-1A0A0B4J241 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRAV13-1A0A0B4J241 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
TRAV13-1A0A0B4J241 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
TRAV13-1A0A0B4J241 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRAV13-1A0A0B4J241 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRAV13-1A0A0B4J241 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRAV13-1A0A0B4J241 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRAV13-1A0A0B4J241 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC16.27■□□□□ 0.2
TRAV13-1A0A0B4J241 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC16.27■□□□□ 0.2
TRAV13-1A0A0B4J241 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC16.27■□□□□ 0.2
TRAV13-1A0A0B4J241 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRAV13-1A0A0B4J241 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
TRAV13-1A0A0B4J241 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TRAV13-1A0A0B4J241 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
TRAV13-1A0A0B4J241 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.19
TRAV13-1A0A0B4J241 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TRAV13-1A0A0B4J241 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TRAV13-1A0A0B4J241 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAV13-1A0A0B4J241 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAV13-1A0A0B4J241 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAV13-1A0A0B4J241 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC16.26■□□□□ 0.19
TRAV13-1A0A0B4J241 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
TRAV13-1A0A0B4J241 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC16.26■□□□□ 0.19
TRAV13-1A0A0B4J241 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
TRAV13-1A0A0B4J241 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAV13-1A0A0B4J241 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC16.26■□□□□ 0.19
TRAV13-1A0A0B4J241 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
TRAV13-1A0A0B4J241 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC16.26■□□□□ 0.19
TRAV13-1A0A0B4J241 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC16.26■□□□□ 0.19
TRAV13-1A0A0B4J241 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRAV13-1A0A0B4J241 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TRAV13-1A0A0B4J241 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms