RNA–Protein interactions for RNA: ENST00000258428.7

REV1-201, Transcript of REV1, DNA directed polymerase, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene REV1, Length 4,751 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
REV1-201ENST00000258428 DCAF8L2P0C7V8 631 aa37.18■■■■□ 3.54
REV1-201ENST00000258428 NISCHQ9Y2I1 1504 aa36.86■■■■□ 3.49
REV1-201ENST00000258428 SUPT5HO00267 1087 aaKnown RBP35.11■■■■□ 3.21
REV1-201ENST00000258428 SHROOM4Q9ULL8 1493 aa34.82■■■■□ 3.17
REV1-201ENST00000258428 EHMT2Q96KQ7 1210 aa33.61■■■□□ 2.97
REV1-201ENST00000258428 FAM9AQ8IZU1 332 aaPredicted RBP33.02■■■□□ 2.88
REV1-201ENST00000258428 APLP2Q06481 763 aa32.83■■■□□ 2.85
REV1-201ENST00000258428 TRIM41Q8WV44 630 aa32.58■■■□□ 2.81
REV1-201ENST00000258428 TTBK1Q5TCY1 1321 aaPredicted RBP32.37■■■□□ 2.77
REV1-201ENST00000258428 RANGAP1P46060 587 aaPredicted RBP32.31■■■□□ 2.76
REV1-201ENST00000258428 PCGF6Q9BYE7 350 aa32.18■■■□□ 2.74
REV1-201ENST00000258428 UBTFP17480 764 aaKnown RBP32.07■■■□□ 2.72
REV1-201ENST00000258428 ATP1B4Q9UN42 357 aaPredicted RBP31.94■■■□□ 2.7
REV1-201ENST00000258428 ABCC9O60706 1549 aa31.79■■■□□ 2.68
REV1-201ENST00000258428 CCER1Q8TC90 406 aaPredicted RBP31.56■■■□□ 2.64
REV1-201ENST00000258428 PABPN1Q86U42 306 aaKnown RBP eCLIP31.46■■■□□ 2.63
REV1-201ENST00000258428 CHIC1Q5VXU3 224 aa31.44■■■□□ 2.62
REV1-201ENST00000258428 ZEB1P37275 1124 aaPredicted RBP31.39■■■□□ 2.62
REV1-201ENST00000258428 PPARGC1BQ86YN6 1023 aaKnown RBP31.39■■■□□ 2.62
REV1-201ENST00000258428 PELP1Q8IZL8 1130 aaKnown RBP31.3■■■□□ 2.6
REV1-201ENST00000258428 LOC105371045A0A1W2PR82 267 aa31.24■■■□□ 2.59
REV1-201ENST00000258428 TRIM26Q12899 539 aaPredicted RBP31.02■■■□□ 2.56
REV1-201ENST00000258428 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.98■■■□□ 2.55
REV1-201ENST00000258428 HNRNPUL2Q1KMD3 747 aaKnown RBP30.98■■■□□ 2.55
REV1-201ENST00000258428 ITGAEP38570 1179 aa30.88■■■□□ 2.53
REV1-201ENST00000258428 CENPBP07199 599 aaPredicted RBP30.81■■■□□ 2.52
REV1-201ENST00000258428 MYT1LQ9UL68 1186 aa30.65■■■□□ 2.5
REV1-201ENST00000258428 ZCCHC6Q5VYS8 1495 aaKnown RBP30.5■■■□□ 2.47
REV1-201ENST00000258428 YTHDC1Q96MU7 727 aaKnown RBP30.41■■■□□ 2.46
REV1-201ENST00000258428 HRCP23327 699 aa30.39■■■□□ 2.45
REV1-201ENST00000258428 SCRIBQ14160 1630 aa30.38■■■□□ 2.45
REV1-201ENST00000258428 CCDC180Q9P1Z9 1646 aa30.27■■■□□ 2.44
REV1-201ENST00000258428 FAM50AQ14320 339 aaKnown RBP30.2■■■□□ 2.42
REV1-201ENST00000258428 NEFLP07196 543 aa30.19■■■□□ 2.42
REV1-201ENST00000258428 FBLN2P98095 1184 aa30.19■■■□□ 2.42
REV1-201ENST00000258428 POLR3GLQ9BT43 218 aa30.19■■■□□ 2.42
REV1-201ENST00000258428 CSRNP3Q8WYN3 585 aa30.12■■■□□ 2.41
REV1-201ENST00000258428 TRIM52Q96A61 297 aa29.92■■■□□ 2.38
REV1-201ENST00000258428 P3H3Q8IVL6 736 aa29.91■■■□□ 2.38
REV1-201ENST00000258428 CNGB1Q14028 1251 aaPredicted RBP29.9■■■□□ 2.38
REV1-201ENST00000258428 ERICH6Q7L0X2 663 aa29.89■■■□□ 2.38
REV1-201ENST00000258428 ARID3CA6NKF2 412 aa29.75■■■□□ 2.35
REV1-201ENST00000258428 NEUROD1Q13562 356 aa29.73■■■□□ 2.35
REV1-201ENST00000258428 RB1CC1Q8TDY2 1594 aa29.73■■■□□ 2.35
REV1-201ENST00000258428 SLC4A1APQ9BWU0 796 aaKnown RBP29.62■■■□□ 2.33
REV1-201ENST00000258428 DIEXFQ68CQ4 756 aaKnown RBP29.61■■■□□ 2.33
REV1-201ENST00000258428 NACADO15069 1562 aa29.51■■■□□ 2.31
REV1-201ENST00000258428 ZNF326Q5BKZ1 582 aaKnown RBP29.48■■■□□ 2.31
REV1-201ENST00000258428 CDK11AQ9UQ88 783 aaPredicted RBP29.48■■■□□ 2.31
REV1-201ENST00000258428 RSF1Q96T23 1441 aaPredicted RBP29.46■■■□□ 2.31
REV1-201ENST00000258428 ZNF777Q9ULD5 760 aaPredicted RBP29.44■■■□□ 2.3
REV1-201ENST00000258428 BAZ1BQ9UIG0 1483 aaKnown RBP29.14■■■□□ 2.26
REV1-201ENST00000258428 ZNF316A6NFI3 1004 aaPredicted RBP29.13■■■□□ 2.25
REV1-201ENST00000258428 ANP32CO43423 234 aa29.13■■■□□ 2.25
REV1-201ENST00000258428 CHMP7Q8WUX9 453 aaPredicted RBP29.12■■■□□ 2.25
REV1-201ENST00000258428 DCAF1Q9Y4B6 1507 aa29.12■■■□□ 2.25
REV1-201ENST00000258428 NPM1P06748 294 aaKnown RBP eCLIP29.1■■■□□ 2.252e-6■■■■■ 46
REV1-201ENST00000258428 DAXXQ9UER7 740 aaPredicted RBP29.03■■■□□ 2.24
REV1-201ENST00000258428 WRNQ14191 1432 aaPredicted RBP eCLIP29.02■■■□□ 2.24
REV1-201ENST00000258428 CECR2Q9BXF3 1484 aa29■■■□□ 2.23
REV1-201ENST00000258428 CLIP1P30622 1438 aa28.99■■■□□ 2.23
REV1-201ENST00000258428 BAZ1AQ9NRL2 1556 aaPredicted RBP28.96■■■□□ 2.23
REV1-201ENST00000258428 BCANQ96GW7 911 aa28.95■■■□□ 2.23
REV1-201ENST00000258428 CHIC2Q9UKJ5 165 aa28.94■■■□□ 2.22
REV1-201ENST00000258428 EEA1Q15075 1411 aa28.94■■■□□ 2.22
REV1-201ENST00000258428 MTUS2Q5JR59 1369 aa28.93■■■□□ 2.22
REV1-201ENST00000258428 ESF1Q9H501 851 aaKnown RBP28.87■■■□□ 2.21
REV1-201ENST00000258428 TONSLQ96HA7 1378 aa28.86■■■□□ 2.21
REV1-201ENST00000258428 TSPY4P0CV99 314 aa28.82■■■□□ 2.2
REV1-201ENST00000258428 TSPY10P0CW01 314 aa28.82■■■□□ 2.2
REV1-201ENST00000258428 CLSPNQ9HAW4 1339 aa28.81■■■□□ 2.2
REV1-201ENST00000258428 GOLGA3Q08378 1498 aa28.8■■■□□ 2.2
REV1-201ENST00000258428 CHGAP10645 457 aaKnown RBP28.8■■■□□ 2.2
REV1-201ENST00000258428 KIF27Q86VH2 1401 aa28.78■■■□□ 2.2
REV1-201ENST00000258428 MYO15BQ96JP2 1530 aa28.77■■■□□ 2.2
REV1-201ENST00000258428 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.74■■■□□ 2.198e-7■■□□□ 13.4
REV1-201ENST00000258428 CEP162Q5TB80 1403 aa28.74■■■□□ 2.19
REV1-201ENST00000258428 STAG3Q9UJ98 1225 aa28.69■■■□□ 2.18
REV1-201ENST00000258428 PLEKHD1A6NEE1 506 aa28.62■■■□□ 2.17
REV1-201ENST00000258428 GTF3C3Q9Y5Q9 886 aa28.62■■■□□ 2.17
REV1-201ENST00000258428 KCNH8Q96L42 1107 aa28.61■■■□□ 2.17
REV1-201ENST00000258428 TNIKQ9UKE5 1360 aa28.59■■■□□ 2.17
REV1-201ENST00000258428 CEP164Q9UPV0 1460 aa28.59■■■□□ 2.17
REV1-201ENST00000258428 PLPPR3Q6T4P5 718 aa28.59■■■□□ 2.17
REV1-201ENST00000258428 NEFMP07197 916 aa28.58■■■□□ 2.17
REV1-201ENST00000258428 MROH2BQ7Z745 1585 aa28.57■■■□□ 2.16
REV1-201ENST00000258428 ERCC6Q03468 1493 aa28.57■■■□□ 2.16
REV1-201ENST00000258428 RRP7BPQ9NSQ0 103 aa28.55■■■□□ 2.16
REV1-201ENST00000258428 DDX10Q13206 875 aaKnown RBP28.53■■■□□ 2.16
REV1-201ENST00000258428 SLC24A1O60721 1099 aa28.49■■■□□ 2.15
REV1-201ENST00000258428 KDM2AQ9Y2K7 1162 aa28.47■■■□□ 2.15
REV1-201ENST00000258428 CANXP27824 592 aaKnown RBP28.43■■■□□ 2.14
REV1-201ENST00000258428 CCDC88BA6NC98 1476 aa28.41■■■□□ 2.14
REV1-201ENST00000258428 CFDP1Q9UEE9 299 aaPredicted RBP28.4■■■□□ 2.14
REV1-201ENST00000258428 CUX2O14529 1486 aa28.39■■■□□ 2.13
REV1-201ENST00000258428 SOGA1O94964 1423 aa28.38■■■□□ 2.13
REV1-201ENST00000258428 ZBTB47Q9UFB7 747 aaPredicted RBP28.38■■■□□ 2.13
REV1-201ENST00000258428 CARMIL1Q5VZK9 1371 aa28.37■■■□□ 2.13
REV1-201ENST00000258428 ACIN1Q9UKV3 1341 aaKnown RBP28.33■■■□□ 2.12
REV1-201ENST00000258428 SMARCA2P51531 1590 aa28.32■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms