Protein–RNA interactions for Protein: P52298

NCBP2, Nuclear cap-binding protein subunit 2, humanhuman

Known RBP eCLIP

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP2P52298 PRPF40A-212ENST00000545856 1358 ntTSL 1 (best)15.01□□□□□ -0.012e-16■□□□□ 8.3
NCBP2P52298 PRPF40A-201ENST00000354363 1622 ntTSL 213.06□□□□□ -0.322e-16■□□□□ 8.3
NCBP2P52298 PRPF40A-211ENST00000493468 1043 ntTSL 1 (best)12.56□□□□□ -0.42e-16■□□□□ 8.3
NCBP2P52298 PRPF40A-203ENST00000448428 490 ntTSL 511.69□□□□□ -0.542e-16■□□□□ 8.3
NCBP2P52298 PRPF40A-202ENST00000410080 8048 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.632e-16■□□□□ 8.3
NCBP2P52298 GNPAT-203ENST00000436239 839 ntAPPRIS ALT2 TSL 316.48■□□□□ 0.235e-10■□□□□ 8.3
NCBP2P52298 GNPAT-202ENST00000416000 1924 ntAPPRIS ALT2 TSL 515.31■□□□□ 0.045e-10■□□□□ 8.3
NCBP2P52298 ZNF720-206ENST00000530881 570 ntAPPRIS ALT2 TSL 1 (best)14.12□□□□□ -0.155e-10■□□□□ 8.3
NCBP2P52298 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC13.87□□□□□ -0.195e-10■□□□□ 8.3
NCBP2P52298 ZNF720-207ENST00000531864 1670 ntTSL 212.9□□□□□ -0.345e-10■□□□□ 8.3
NCBP2P52298 ZNF720-211ENST00000539915 837 ntTSL 3 BASIC9.76□□□□□ -0.855e-10■□□□□ 8.3
NCBP2P52298 ZNF720-201ENST00000316491 2769 ntAPPRIS P2 TSL 1 (best) BASIC9.49□□□□□ -0.895e-10■□□□□ 8.3
NCBP2P52298 ZNF720-212ENST00000542684 481 ntTSL 37.58□□□□□ -1.25e-10■□□□□ 8.3
NCBP2P52298 GNPAT-201ENST00000366647 2643 ntAPPRIS P2 TSL 1 (best) BASIC7.22□□□□□ -1.255e-10■□□□□ 8.3
NCBP2P52298 ZNF720-209ENST00000534277 5994 ntTSL 1 (best)7.16□□□□□ -1.265e-10■□□□□ 8.3
NCBP2P52298 ZNF720-205ENST00000529943 1214 ntTSL 26.69□□□□□ -1.345e-10■□□□□ 8.3
NCBP2P52298 ZNF720-213ENST00000544044 572 ntTSL 56.52□□□□□ -1.375e-10■□□□□ 8.3
NCBP2P52298 ZNF720-202ENST00000398696 1339 ntTSL 4 BASIC6.21□□□□□ -1.425e-10■□□□□ 8.3
NCBP2P52298 ZNF720-203ENST00000398707 2282 ntTSL 25.87□□□□□ -1.475e-10■□□□□ 8.3
NCBP2P52298 ZNF720-208ENST00000533488 639 ntTSL 34.67□□□□□ -1.665e-10■□□□□ 8.3
NCBP2P52298 ZNF720-204ENST00000529515 518 ntAPPRIS ALT2 TSL 34.53□□□□□ -1.685e-10■□□□□ 8.3
NCBP2P52298 PSPC1-204ENST00000492741 1709 ntTSL 220.74■□□□□ 0.915e-6■□□□□ 8.3
NCBP2P52298 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.485e-6■□□□□ 8.3
NCBP2P52298 PSPC1-203ENST00000471658 1647 ntTSL 1 (best)18■□□□□ 0.475e-6■□□□□ 8.3
NCBP2P52298 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.385e-6■□□□□ 8.3
NCBP2P52298 PSPC1-202ENST00000427943 866 ntTSL 516.79■□□□□ 0.285e-6■□□□□ 8.3
NCBP2P52298 FAM126A-207ENST00000467005 542 ntTSL 212.59□□□□□ -0.393e-7■□□□□ 8.3
NCBP2P52298 FAM126A-201ENST00000409763 616 ntTSL 2 BASIC12.4□□□□□ -0.423e-7■□□□□ 8.3
NCBP2P52298 FAM126A-206ENST00000465661 525 ntTSL 311.67□□□□□ -0.543e-7■□□□□ 8.3
NCBP2P52298 FAM126A-208ENST00000477349 544 ntTSL 49.24□□□□□ -0.933e-7■□□□□ 8.3
NCBP2P52298 FAM126A-205ENST00000440481 6337 ntTSL 1 (best)8.81□□□□□ -13e-7■□□□□ 8.3
NCBP2P52298 FAM126A-202ENST00000409923 3130 ntTSL 5 BASIC8.54□□□□□ -1.043e-7■□□□□ 8.3
NCBP2P52298 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.823e-7■□□□□ 8.3
NCBP2P52298 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.282e-12■□□□□ 8.3
NCBP2P52298 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC24.37■■□□□ 1.492e-17■□□□□ 8.3
NCBP2P52298 UBE2S-202ENST00000587845 743 ntTSL 221.65■■□□□ 1.062e-17■□□□□ 8.3
NCBP2P52298 PKP3-206ENST00000528036 940 ntTSL 221.11■□□□□ 0.972e-6■□□□□ 8.3
NCBP2P52298 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.932e-17■□□□□ 8.3
NCBP2P52298 PKP3-210ENST00000533249 1111 ntTSL 320.62■□□□□ 0.892e-6■□□□□ 8.3
NCBP2P52298 PDLIM7-206ENST00000463411 1015 ntTSL 220.2■□□□□ 0.822e-6■□□□□ 8.3
NCBP2P52298 PKP3-211ENST00000534401 756 ntTSL 319.63■□□□□ 0.732e-6■□□□□ 8.3
NCBP2P52298 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC19.56■□□□□ 0.722e-6■□□□□ 8.3
NCBP2P52298 PKP3-205ENST00000527442 847 ntTSL 319.37■□□□□ 0.692e-6■□□□□ 8.3
NCBP2P52298 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.492e-6■□□□□ 8.3
NCBP2P52298 PDLIM7-204ENST00000393546 671 ntTSL 317.6■□□□□ 0.412e-6■□□□□ 8.3
NCBP2P52298 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.362e-6■□□□□ 8.3
NCBP2P52298 PDLIM7-207ENST00000486828 1904 ntTSL 1 (best)17■□□□□ 0.312e-6■□□□□ 8.3
NCBP2P52298 PDLIM7-209ENST00000503346 669 ntTSL 216.85■□□□□ 0.292e-6■□□□□ 8.3
NCBP2P52298 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.272e-6■□□□□ 8.3
NCBP2P52298 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.262e-6■□□□□ 8.3
NCBP2P52298 PDLIM7-208ENST00000493815 1686 ntTSL 1 (best)16.65■□□□□ 0.262e-6■□□□□ 8.3
NCBP2P52298 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC16.53■□□□□ 0.242e-6■□□□□ 8.3
NCBP2P52298 PKP3-208ENST00000531857 687 ntTSL 415.49■□□□□ 0.072e-6■□□□□ 8.3
NCBP2P52298 PKP3-209ENST00000533069 590 ntTSL 215.26■□□□□ 0.032e-6■□□□□ 8.3
NCBP2P52298 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC15.24■□□□□ 0.032e-6■□□□□ 8.3
NCBP2P52298 PDLIM7-215ENST00000506161 759 ntTSL 315.24■□□□□ 0.032e-6■□□□□ 8.3
NCBP2P52298 PDLIM7-213ENST00000505074 931 ntTSL 314.49□□□□□ -0.092e-6■□□□□ 8.3
NCBP2P52298 PDLIM7-210ENST00000503827 451 ntTSL 513.9□□□□□ -0.182e-6■□□□□ 8.3
NCBP2P52298 PDLIM7-211ENST00000504318 597 ntTSL 312.72□□□□□ -0.372e-6■□□□□ 8.3
NCBP2P52298 FDFT1-218ENST00000530664 1761 ntTSL 2 BASIC11.49□□□□□ -0.572e-6■□□□□ 8.3
NCBP2P52298 FDFT1-225ENST00000622850 1987 ntTSL 2 BASIC10.14□□□□□ -0.792e-6■□□□□ 8.3
NCBP2P52298 HOXB7-203ENST00000567101 528 ntTSL 29.1□□□□□ -0.952e-6■□□□□ 8.3
NCBP2P52298 FDFT1-212ENST00000528643 1909 ntTSL 2 BASIC7.87□□□□□ -1.152e-6■□□□□ 8.3
NCBP2P52298 DYRK1A-206ENST00000455097 338 ntTSL 1 (best)7.77□□□□□ -1.172e-6■□□□□ 8.3
NCBP2P52298 DYRK1A-201ENST00000338785 5498 ntTSL 1 (best) BASIC7.26□□□□□ -1.252e-6■□□□□ 8.3
NCBP2P52298 DYRK1A-205ENST00000426672 519 ntTSL 53□□□□□ -1.932e-6■□□□□ 8.3
NCBP2P52298 STRN3-207ENST00000555358 2208 ntTSL 1 (best)22.1■■□□□ 1.135e-15■□□□□ 8.3
NCBP2P52298 HYOU1-202ENST00000526656 862 ntTSL 321.97■■□□□ 1.115e-15■□□□□ 8.3
NCBP2P52298 HYOU1-203ENST00000527038 629 ntTSL 220.89■□□□□ 0.935e-15■□□□□ 8.3
NCBP2P52298 HYOU1-201ENST00000526354 568 ntTSL 219.31■□□□□ 0.685e-15■□□□□ 8.3
NCBP2P52298 HYOU1-206ENST00000530467 552 ntTSL 418.06■□□□□ 0.485e-15■□□□□ 8.3
NCBP2P52298 HYOU1-214ENST00000534233 711 ntTSL 217.98■□□□□ 0.475e-15■□□□□ 8.3
NCBP2P52298 HYOU1-211ENST00000532421 582 ntTSL 217.86■□□□□ 0.455e-15■□□□□ 8.3
NCBP2P52298 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC17.59■□□□□ 0.415e-15■□□□□ 8.3
NCBP2P52298 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.375e-15■□□□□ 8.3
NCBP2P52298 HYOU1-215ENST00000543287 2464 ntTSL 216.34■□□□□ 0.215e-15■□□□□ 8.3
NCBP2P52298 HYOU1-205ENST00000529174 549 ntTSL 415.92■□□□□ 0.145e-15■□□□□ 8.3
NCBP2P52298 HYOU1-222ENST00000622474 549 ntTSL 214.82□□□□□ -0.045e-15■□□□□ 8.3
NCBP2P52298 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC14.6□□□□□ -0.075e-15■□□□□ 8.3
NCBP2P52298 HYOU1-216ENST00000610597 491 ntTSL 413.94□□□□□ -0.185e-15■□□□□ 8.3
NCBP2P52298 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC13.82□□□□□ -0.25e-15■□□□□ 8.3
NCBP2P52298 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC13.55□□□□□ -0.245e-15■□□□□ 8.3
NCBP2P52298 HYOU1-220ENST00000617285 4529 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.365e-15■□□□□ 8.3
NCBP2P52298 HYOU1-210ENST00000531968 550 ntTSL 412.4□□□□□ -0.425e-15■□□□□ 8.3
NCBP2P52298 HYOU1-221ENST00000621959 3358 ntTSL 2 BASIC12.07□□□□□ -0.485e-15■□□□□ 8.3
NCBP2P52298 HYOU1-217ENST00000612687 4360 ntTSL 5 BASIC11.4□□□□□ -0.585e-15■□□□□ 8.3
NCBP2P52298 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.594e-16■□□□□ 8.3
NCBP2P52298 PRAME-205ENST00000405655 2179 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.282e-8■□□□□ 8.3
NCBP2P52298 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.282e-8■□□□□ 8.3
NCBP2P52298 PRAME-202ENST00000398743 2196 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.312e-8■□□□□ 8.3
NCBP2P52298 PRAME-209ENST00000439106 891 ntAPPRIS ALT2 TSL 312.65□□□□□ -0.382e-8■□□□□ 8.3
NCBP2P52298 PRAME-201ENST00000398741 2202 ntAPPRIS P2 TSL 5 BASIC12.38□□□□□ -0.432e-8■□□□□ 8.3
NCBP2P52298 PRAME-203ENST00000402697 2057 ntAPPRIS P2 TSL 5 BASIC12.3□□□□□ -0.442e-8■□□□□ 8.3
NCBP2P52298 PRAME-211ENST00000476336 589 ntTSL 212.29□□□□□ -0.442e-8■□□□□ 8.3
NCBP2P52298 PRAME-213ENST00000492657 2831 ntTSL 1 (best)12.15□□□□□ -0.462e-8■□□□□ 8.3
NCBP2P52298 PRAME-207ENST00000420709 705 ntAPPRIS ALT2 TSL 211.6□□□□□ -0.552e-8■□□□□ 8.3
NCBP2P52298 PRAME-206ENST00000406503 740 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.562e-8■□□□□ 8.3
NCBP2P52298 PRAME-208ENST00000438888 566 ntAPPRIS ALT2 TSL 411.49□□□□□ -0.572e-8■□□□□ 8.3
NCBP2P52298 PRAME-212ENST00000485532 709 ntTSL 311.4□□□□□ -0.582e-8■□□□□ 8.3
NCBP2P52298 PRAME-204ENST00000403441 567 ntAPPRIS ALT2 TSL 311.08□□□□□ -0.642e-8■□□□□ 8.3
Retrieved 100 of 18,329 protein–RNA pairs in 462.3 ms