RNA–Protein interactions for RNA: ENST00000420709.5

PRAME-207, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS ALT2 TSL 2

Gene PRAME, Length 705 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-207ENST00000420709 NISCHQ9Y2I1 1504 aa32.22■■■□□ 2.75
PRAME-207ENST00000420709 ABCC9O60706 1549 aa28.96■■■□□ 2.23
PRAME-207ENST00000420709 CCDC180Q9P1Z9 1646 aa28.89■■■□□ 2.22
PRAME-207ENST00000420709 RB1CC1Q8TDY2 1594 aa27.51■■□□□ 1.99
PRAME-207ENST00000420709 NACADO15069 1562 aa27.3■■□□□ 1.96
PRAME-207ENST00000420709 DCAF8L2P0C7V8 631 aa27.26■■□□□ 1.95
PRAME-207ENST00000420709 DNAJC5BQ9UF47 199 aa27.15■■□□□ 1.94
PRAME-207ENST00000420709 PABPN1Q86U42 306 aaKnown RBP eCLIP26.97■■□□□ 1.91
PRAME-207ENST00000420709 UNC13AQ9UPW8 1703 aa26.94■■□□□ 1.9
PRAME-207ENST00000420709 MYO15BQ96JP2 1530 aa26.88■■□□□ 1.89
PRAME-207ENST00000420709 BICRAQ9NZM4 1560 aa26.74■■□□□ 1.87
PRAME-207ENST00000420709 ZCCHC6Q5VYS8 1495 aaKnown RBP26.72■■□□□ 1.87
PRAME-207ENST00000420709 DCAF1Q9Y4B6 1507 aa26.56■■□□□ 1.84
PRAME-207ENST00000420709 SCRIBQ14160 1630 aa26.42■■□□□ 1.82
PRAME-207ENST00000420709 SHROOM4Q9ULL8 1493 aa26.28■■□□□ 1.8
PRAME-207ENST00000420709 CC2D2AQ9P2K1 1620 aa26.14■■□□□ 1.78
PRAME-207ENST00000420709 EIF4G1Q04637 1599 aaKnown RBP26.07■■□□□ 1.76
PRAME-207ENST00000420709 CECR2Q9BXF3 1484 aa26.05■■□□□ 1.76
PRAME-207ENST00000420709 NCAPD3P42695 1498 aa25.2■■□□□ 1.62
PRAME-207ENST00000420709 ATAD2BQ9ULI0 1458 aa25.16■■□□□ 1.62
PRAME-207ENST00000420709 SMARCA4P51532 1647 aa25.15■■□□□ 1.62
PRAME-207ENST00000420709 SMARCA2P51531 1590 aa25.07■■□□□ 1.6
PRAME-207ENST00000420709 HMGXB3Q12766 1538 aa25.03■■□□□ 1.6
PRAME-207ENST00000420709 BAZ1AQ9NRL2 1556 aaPredicted RBP25■■□□□ 1.59
PRAME-207ENST00000420709 ERCC6Q03468 1493 aa24.98■■□□□ 1.59
PRAME-207ENST00000420709 BAZ1BQ9UIG0 1483 aaKnown RBP24.93■■□□□ 1.58
PRAME-207ENST00000420709 NESP48681 1621 aa24.89■■□□□ 1.57
PRAME-207ENST00000420709 CUX2O14529 1486 aa24.89■■□□□ 1.57
PRAME-207ENST00000420709 MROH2BQ7Z745 1585 aa24.87■■□□□ 1.57
PRAME-207ENST00000420709 PEG3Q9GZU2 1588 aa24.86■■□□□ 1.57
PRAME-207ENST00000420709 DNAJC5Q9H3Z4 198 aa24.85■■□□□ 1.57
PRAME-207ENST00000420709 LAMC3Q9Y6N6 1575 aa24.65■■□□□ 1.54
PRAME-207ENST00000420709 THOC2Q8NI27 1593 aaKnown RBP24.61■■□□□ 1.53
PRAME-207ENST00000420709 WIZO95785 1651 aa24.59■■□□□ 1.53
PRAME-207ENST00000420709 KIF21AQ7Z4S6 1674 aa24.57■■□□□ 1.52
PRAME-207ENST00000420709 PDS5BQ9NTI5 1447 aa24.5■■□□□ 1.51
PRAME-207ENST00000420709 CADPSQ9ULU8 1353 aa24.45■■□□□ 1.5
PRAME-207ENST00000420709 RSF1Q96T23 1441 aaPredicted RBP24.33■■□□□ 1.49
PRAME-207ENST00000420709 MRC2Q9UBG0 1479 aa24.32■■□□□ 1.48
PRAME-207ENST00000420709 WDR62O43379 1518 aa24.25■■□□□ 1.47
PRAME-207ENST00000420709 TOP2AP11388 1531 aaKnown RBP24.24■■□□□ 1.47
PRAME-207ENST00000420709 CEP164Q9UPV0 1460 aa24.23■■□□□ 1.47
PRAME-207ENST00000420709 FANCD2Q9BXW9 1451 aa24.2■■□□□ 1.47
PRAME-207ENST00000420709 CFTRP13569 1480 aa24.18■■□□□ 1.46
PRAME-207ENST00000420709 URB2Q14146 1524 aaKnown RBP24.02■■□□□ 1.44
PRAME-207ENST00000420709 CCDC88BA6NC98 1476 aa23.97■■□□□ 1.43
PRAME-207ENST00000420709 PRDM2Q13029 1718 aa23.96■■□□□ 1.43
PRAME-207ENST00000420709 TRIM41Q8WV44 630 aa23.86■■□□□ 1.41
PRAME-207ENST00000420709 TOPBP1Q92547 1522 aa23.75■■□□□ 1.39
PRAME-207ENST00000420709 OSCARQ8IYS5 282 aa23.75■■□□□ 1.39
PRAME-207ENST00000420709 ZNF608Q9ULD9 1512 aaPredicted RBP23.74■■□□□ 1.39
PRAME-207ENST00000420709 IFT140Q96RY7 1462 aa23.72■■□□□ 1.39
PRAME-207ENST00000420709 DNMBPQ6XZF7 1577 aa23.65■■□□□ 1.38
PRAME-207ENST00000420709 ABCC8Q09428 1581 aa23.63■■□□□ 1.37
PRAME-207ENST00000420709 EIF4G3O43432 1585 aaKnown RBP23.6■■□□□ 1.37
PRAME-207ENST00000420709 TARBP1Q13395 1621 aaKnown RBP23.54■■□□□ 1.36
PRAME-207ENST00000420709 AQRO60306 1485 aaKnown RBP eCLIP23.51■■□□□ 1.352e-41■■■■■ 46.3
PRAME-207ENST00000420709 POLA1P09884 1462 aaPredicted RBP23.51■■□□□ 1.35
PRAME-207ENST00000420709 RIMBP3CA6NJZ7 1639 aa23.5■■□□□ 1.35
PRAME-207ENST00000420709 RIMBP3BA6NNM3 1639 aa23.5■■□□□ 1.35
PRAME-207ENST00000420709 RIMBP3Q9UFD9 1639 aa23.5■■□□□ 1.35
PRAME-207ENST00000420709 RAD54L2Q9Y4B4 1467 aa23.46■■□□□ 1.35
PRAME-207ENST00000420709 CHD1O14646 1710 aa23.44■■□□□ 1.34
PRAME-207ENST00000420709 ARHGEF11O15085 1522 aa23.41■■□□□ 1.34
PRAME-207ENST00000420709 SOGA1O94964 1423 aa23.39■■□□□ 1.33
PRAME-207ENST00000420709 FGD5Q6ZNL6 1462 aa23.37■■□□□ 1.33
PRAME-207ENST00000420709 FBLN2P98095 1184 aa23.37■■□□□ 1.33
PRAME-207ENST00000420709 CUX1P39880 1505 aa23.37■■□□□ 1.33
PRAME-207ENST00000420709 TDRD9Q8NDG6 1382 aaKnown RBP23.37■■□□□ 1.33
PRAME-207ENST00000420709 SUPT5HO00267 1087 aaKnown RBP23.33■■□□□ 1.33
PRAME-207ENST00000420709 SNAPC4Q5SXM2 1469 aa23.28■■□□□ 1.32
PRAME-207ENST00000420709 WDR97A6NE52 1622 aa23.24■■□□□ 1.31
PRAME-207ENST00000420709 CYB5RLQ6IPT4 315 aa23.24■■□□□ 1.31
PRAME-207ENST00000420709 ARAP1Q96P48 1450 aa23.2■■□□□ 1.3
PRAME-207ENST00000420709 GRIN2BQ13224 1484 aa23.17■■□□□ 1.3
PRAME-207ENST00000420709 MAGI1Q96QZ7 1491 aaPredicted RBP23.17■■□□□ 1.3
PRAME-207ENST00000420709 CHMP7Q8WUX9 453 aaPredicted RBP23.16■■□□□ 1.3
PRAME-207ENST00000420709 CLASP1Q7Z460 1538 aa23.13■■□□□ 1.29
PRAME-207ENST00000420709 PBRM1Q86U86 1689 aa23.13■■□□□ 1.29
PRAME-207ENST00000420709 GAPVD1Q14C86 1478 aa23.11■■□□□ 1.29
PRAME-207ENST00000420709 SYNJ1O43426 1573 aa23.11■■□□□ 1.29
PRAME-207ENST00000420709 SYNJ2O15056 1496 aa23.1■■□□□ 1.29
PRAME-207ENST00000420709 ABCA10Q8WWZ4 1543 aa23.08■■□□□ 1.28
PRAME-207ENST00000420709 ABCA5Q8WWZ7 1642 aa23.06■■□□□ 1.28
PRAME-207ENST00000420709 TRHP20396 242 aaPredicted RBP22.99■■□□□ 1.27
PRAME-207ENST00000420709 WRNQ14191 1432 aaPredicted RBP eCLIP22.98■■□□□ 1.27
PRAME-207ENST00000420709 BIVM-ERCC5R4GMW8 1640 aa22.97■■□□□ 1.27
PRAME-207ENST00000420709 TOP2BQ02880 1626 aa22.97■■□□□ 1.27
PRAME-207ENST00000420709 ADAMTS12P58397 1594 aa22.9■■□□□ 1.26
PRAME-207ENST00000420709 GRIN2AQ12879 1464 aa22.89■■□□□ 1.25
PRAME-207ENST00000420709 CEP170Q5SW79 1584 aa22.84■■□□□ 1.25
PRAME-207ENST00000420709 ERCC6L2Q5T890 1561 aa22.83■■□□□ 1.25
PRAME-207ENST00000420709 FHAD1B1AJZ9 1412 aa22.8■■□□□ 1.24
PRAME-207ENST00000420709 NUP160Q12769 1436 aa22.8■■□□□ 1.24
PRAME-207ENST00000420709 ERICH3Q5RHP9 1530 aa22.78■■□□□ 1.24
PRAME-207ENST00000420709 SHROOM2Q13796 1616 aa22.71■■□□□ 1.23
PRAME-207ENST00000420709 PRG4Q92954 1404 aaPredicted RBP22.6■■□□□ 1.21
PRAME-207ENST00000420709 RUSC2Q8N2Y8 1516 aa22.58■■□□□ 1.21
PRAME-207ENST00000420709 JPH4Q96JJ6 628 aa22.57■■□□□ 1.2
PRAME-207ENST00000420709 KIF27Q86VH2 1401 aa22.5■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms