RNA–Protein interactions for RNA: ENST00000357479.9

STRN3-202, Transcript of striatin 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene STRN3, Length 2,799 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRN3-202ENST00000357479 NISCHQ9Y2I1 1504 aa36.94■■■■□ 3.5
STRN3-202ENST00000357479 SHROOM4Q9ULL8 1493 aa32.04■■■□□ 2.72
STRN3-202ENST00000357479 SUPT5HO00267 1087 aaKnown RBP31.65■■■□□ 2.66
STRN3-202ENST00000357479 ZCCHC6Q5VYS8 1495 aaKnown RBP31.35■■■□□ 2.61
STRN3-202ENST00000357479 CCDC180Q9P1Z9 1646 aa31.09■■■□□ 2.57
STRN3-202ENST00000357479 MYO15BQ96JP2 1530 aa31.06■■■□□ 2.56
STRN3-202ENST00000357479 CHIC1Q5VXU3 224 aa30.98■■■□□ 2.55
STRN3-202ENST00000357479 HRCP23327 699 aa30.94■■■□□ 2.54
STRN3-202ENST00000357479 DCAF8L2P0C7V8 631 aa30.62■■■□□ 2.49
STRN3-202ENST00000357479 PCGF6Q9BYE7 350 aa30.61■■■□□ 2.49
STRN3-202ENST00000357479 PPARGC1BQ86YN6 1023 aaKnown RBP30.3■■■□□ 2.44
STRN3-202ENST00000357479 DCAF1Q9Y4B6 1507 aa30.26■■■□□ 2.44
STRN3-202ENST00000357479 LOC105371045A0A1W2PR82 267 aa30.15■■■□□ 2.42
STRN3-202ENST00000357479 TRIM26Q12899 539 aaPredicted RBP29.84■■■□□ 2.37
STRN3-202ENST00000357479 ABCC9O60706 1549 aa29.7■■■□□ 2.34
STRN3-202ENST00000357479 RSF1Q96T23 1441 aaPredicted RBP29.47■■■□□ 2.31
STRN3-202ENST00000357479 TRIM41Q8WV44 630 aa29.38■■■□□ 2.29
STRN3-202ENST00000357479 ZEB1P37275 1124 aaPredicted RBP29.37■■■□□ 2.29
STRN3-202ENST00000357479 SCRIBQ14160 1630 aa29.37■■■□□ 2.29
STRN3-202ENST00000357479 RB1CC1Q8TDY2 1594 aa29.28■■■□□ 2.28
STRN3-202ENST00000357479 FAM9AQ8IZU1 332 aaPredicted RBP29.25■■■□□ 2.27
STRN3-202ENST00000357479 EHMT2Q96KQ7 1210 aa29.06■■■□□ 2.24
STRN3-202ENST00000357479 SCAF1Q9H7N4 1312 aaKnown RBP28.89■■■□□ 2.22
STRN3-202ENST00000357479 CECR2Q9BXF3 1484 aa28.85■■■□□ 2.21
STRN3-202ENST00000357479 PELP1Q8IZL8 1130 aaKnown RBP28.82■■■□□ 2.2
STRN3-202ENST00000357479 MROH2BQ7Z745 1585 aa28.8■■■□□ 2.2
STRN3-202ENST00000357479 WIZO95785 1651 aa28.69■■■□□ 2.18
STRN3-202ENST00000357479 NACADO15069 1562 aa28.63■■■□□ 2.17
STRN3-202ENST00000357479 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.61■■■□□ 2.17
STRN3-202ENST00000357479 CCER1Q8TC90 406 aaPredicted RBP28.54■■■□□ 2.16
STRN3-202ENST00000357479 EIF4G1Q04637 1599 aaKnown RBP28.49■■■□□ 2.15
STRN3-202ENST00000357479 BAZ1AQ9NRL2 1556 aaPredicted RBP28.49■■■□□ 2.15
STRN3-202ENST00000357479 ACIN1Q9UKV3 1341 aaKnown RBP28.4■■■□□ 2.14
STRN3-202ENST00000357479 NEUROD1Q13562 356 aa28.34■■■□□ 2.13
STRN3-202ENST00000357479 DIEXFQ68CQ4 756 aaKnown RBP28.27■■■□□ 2.12
STRN3-202ENST00000357479 ABCC8Q09428 1581 aa28.27■■■□□ 2.12
STRN3-202ENST00000357479 WRNQ14191 1432 aaPredicted RBP eCLIP28.26■■■□□ 2.112e-6■■□□□ 13.9
STRN3-202ENST00000357479 TTBK1Q5TCY1 1321 aaPredicted RBP28.26■■■□□ 2.11
STRN3-202ENST00000357479 CCDC88BA6NC98 1476 aa28.24■■■□□ 2.11
STRN3-202ENST00000357479 CEP162Q5TB80 1403 aa28.2■■■□□ 2.1
STRN3-202ENST00000357479 TOP2AP11388 1531 aaKnown RBP28.18■■■□□ 2.1
STRN3-202ENST00000357479 CENPBP07199 599 aaPredicted RBP28.12■■■□□ 2.09
STRN3-202ENST00000357479 GTF3C3Q9Y5Q9 886 aa28.11■■■□□ 2.09
STRN3-202ENST00000357479 SOGA1O94964 1423 aa28.1■■■□□ 2.09
STRN3-202ENST00000357479 TNIKQ9UKE5 1360 aa28.07■■■□□ 2.08
STRN3-202ENST00000357479 SMARCA2P51531 1590 aa28.07■■■□□ 2.08
STRN3-202ENST00000357479 SMARCA4P51532 1647 aa28.03■■■□□ 2.08
STRN3-202ENST00000357479 RUSC2Q8N2Y8 1516 aa27.95■■■□□ 2.06
STRN3-202ENST00000357479 CSRNP3Q8WYN3 585 aa27.94■■■□□ 2.06
STRN3-202ENST00000357479 UBTFP17480 764 aaKnown RBP27.93■■■□□ 2.06
STRN3-202ENST00000357479 EEA1Q15075 1411 aa27.93■■■□□ 2.06
STRN3-202ENST00000357479 ZNF316A6NFI3 1004 aaPredicted RBP27.9■■■□□ 2.06
STRN3-202ENST00000357479 GOLGA3Q08378 1498 aa27.83■■■□□ 2.05
STRN3-202ENST00000357479 UNC13AQ9UPW8 1703 aa27.74■■■□□ 2.03
STRN3-202ENST00000357479 YTHDC1Q96MU7 727 aaKnown RBP27.71■■■□□ 2.03
STRN3-202ENST00000357479 HNRNPUL2Q1KMD3 747 aaKnown RBP27.66■■■□□ 2.02
STRN3-202ENST00000357479 MIER1Q8N108 512 aa27.61■■■□□ 2.01
STRN3-202ENST00000357479 CEP164Q9UPV0 1460 aa27.6■■■□□ 2.01
STRN3-202ENST00000357479 KIF21BO75037 1637 aa27.56■■■□□ 2
STRN3-202ENST00000357479 CLIP1P30622 1438 aa27.56■■■□□ 2
STRN3-202ENST00000357479 SYNJ1O43426 1573 aa27.54■■■□□ 2
STRN3-202ENST00000357479 VPS8Q8N3P4 1428 aa27.49■■□□□ 1.99
STRN3-202ENST00000357479 MYT1Q01538 1121 aa27.48■■□□□ 1.99
STRN3-202ENST00000357479 PABPN1Q86U42 306 aaKnown RBP eCLIP27.41■■□□□ 1.98
STRN3-202ENST00000357479 PEG3Q9GZU2 1588 aa27.4■■□□□ 1.98
STRN3-202ENST00000357479 APLP2Q06481 763 aa27.39■■□□□ 1.98
STRN3-202ENST00000357479 BAZ1BQ9UIG0 1483 aaKnown RBP27.38■■□□□ 1.97
STRN3-202ENST00000357479 RAPGEF2Q9Y4G8 1499 aa27.38■■□□□ 1.97
STRN3-202ENST00000357479 BICRAQ9NZM4 1560 aa27.35■■□□□ 1.97
STRN3-202ENST00000357479 RANGAP1P46060 587 aaPredicted RBP27.32■■□□□ 1.96
STRN3-202ENST00000357479 ATAD2BQ9ULI0 1458 aa27.19■■□□□ 1.94
STRN3-202ENST00000357479 DHX57Q6P158 1386 aaKnown RBP27.16■■□□□ 1.94
STRN3-202ENST00000357479 CLSPNQ9HAW4 1339 aa27.14■■□□□ 1.93
STRN3-202ENST00000357479 TOP2BQ02880 1626 aa27.1■■□□□ 1.93
STRN3-202ENST00000357479 ARAP1Q96P48 1450 aa27.05■■□□□ 1.92
STRN3-202ENST00000357479 KANK4Q5T7N3 995 aaPredicted RBP27.02■■□□□ 1.92
STRN3-202ENST00000357479 ERICH3Q5RHP9 1530 aa27.01■■□□□ 1.91
STRN3-202ENST00000357479 PRXQ9BXM0 1461 aa26.99■■□□□ 1.91
STRN3-202ENST00000357479 BIVM-ERCC5R4GMW8 1640 aa26.98■■□□□ 1.91
STRN3-202ENST00000357479 SUPT16HQ9Y5B9 1047 aaKnown RBP26.94■■□□□ 1.9
STRN3-202ENST00000357479 RRBP1Q9P2E9 1410 aaKnown RBP26.92■■□□□ 1.9
STRN3-202ENST00000357479 CUX2O14529 1486 aa26.83■■□□□ 1.89
STRN3-202ENST00000357479 CCNB3Q8WWL7 1395 aa26.79■■□□□ 1.88
STRN3-202ENST00000357479 CUX1P39880 1505 aa26.76■■□□□ 1.87
STRN3-202ENST00000357479 ITGAEP38570 1179 aa26.75■■□□□ 1.87
STRN3-202ENST00000357479 KIF27Q86VH2 1401 aa26.74■■□□□ 1.87
STRN3-202ENST00000357479 ARHGAP35Q9NRY4 1499 aa26.72■■□□□ 1.87
STRN3-202ENST00000357479 KCNH8Q96L42 1107 aa26.65■■□□□ 1.86
STRN3-202ENST00000357479 RAB3GAP2Q9H2M9 1393 aa26.65■■□□□ 1.86
STRN3-202ENST00000357479 TSHZ2Q9NRE2 1034 aa26.64■■□□□ 1.86
STRN3-202ENST00000357479 MAPKBP1O60336 1514 aa26.63■■□□□ 1.85
STRN3-202ENST00000357479 HMGXB3Q12766 1538 aa26.55■■□□□ 1.84
STRN3-202ENST00000357479 TIAM1Q13009 1591 aa26.52■■□□□ 1.84
STRN3-202ENST00000357479 NCAPD3P42695 1498 aa26.52■■□□□ 1.84
STRN3-202ENST00000357479 SETD5Q9C0A6 1442 aa26.49■■□□□ 1.83
STRN3-202ENST00000357479 CFTRP13569 1480 aa26.49■■□□□ 1.83
STRN3-202ENST00000357479 WDR97A6NE52 1622 aa26.46■■□□□ 1.83
STRN3-202ENST00000357479 MAP3K1Q13233 1512 aa26.46■■□□□ 1.83
STRN3-202ENST00000357479 DDX10Q13206 875 aaKnown RBP26.45■■□□□ 1.82
STRN3-202ENST00000357479 SIN3AQ96ST3 1273 aa26.44■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms