Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC23.64■■□□□ 1.37
LYSMD4Q5XG99 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
LYSMD4Q5XG99 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
LYSMD4Q5XG99 AC110285.6-201ENST00000617652 491 ntBASIC23.64■■□□□ 1.37
LYSMD4Q5XG99 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC23.63■■□□□ 1.37
LYSMD4Q5XG99 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
LYSMD4Q5XG99 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
LYSMD4Q5XG99 LSM4-201ENST00000252816 986 ntTSL 2 BASIC23.63■■□□□ 1.37
LYSMD4Q5XG99 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC23.63■■□□□ 1.37
LYSMD4Q5XG99 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC23.63■■□□□ 1.37
LYSMD4Q5XG99 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC23.63■■□□□ 1.37
LYSMD4Q5XG99 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC23.63■■□□□ 1.37
LYSMD4Q5XG99 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
LYSMD4Q5XG99 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
LYSMD4Q5XG99 SENP5-202ENST00000419026 973 ntTSL 3 BASIC23.62■■□□□ 1.37
LYSMD4Q5XG99 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
LYSMD4Q5XG99 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
LYSMD4Q5XG99 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
LYSMD4Q5XG99 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
LYSMD4Q5XG99 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
LYSMD4Q5XG99 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
LYSMD4Q5XG99 AC096631.2-201ENST00000436136 790 ntBASIC23.61■■□□□ 1.37
LYSMD4Q5XG99 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC23.61■■□□□ 1.37
LYSMD4Q5XG99 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC23.61■■□□□ 1.37
LYSMD4Q5XG99 EXOG-217ENST00000630638 197 ntTSL 5 BASIC23.61■■□□□ 1.37
LYSMD4Q5XG99 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC23.61■■□□□ 1.37
LYSMD4Q5XG99 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
LYSMD4Q5XG99 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC23.6■■□□□ 1.37
LYSMD4Q5XG99 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC23.6■■□□□ 1.37
LYSMD4Q5XG99 TK2-202ENST00000417693 1046 ntTSL 2 BASIC23.6■■□□□ 1.37
LYSMD4Q5XG99 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC23.6■■□□□ 1.37
LYSMD4Q5XG99 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC23.6■■□□□ 1.37
LYSMD4Q5XG99 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC23.6■■□□□ 1.37
LYSMD4Q5XG99 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
LYSMD4Q5XG99 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
LYSMD4Q5XG99 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
LYSMD4Q5XG99 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
LYSMD4Q5XG99 AK3-203ENST00000447596 705 ntTSL 2 BASIC23.59■■□□□ 1.37
LYSMD4Q5XG99 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC23.59■■□□□ 1.37
LYSMD4Q5XG99 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC23.59■■□□□ 1.37
LYSMD4Q5XG99 AC005837.3-201ENST00000612163 286 ntBASIC23.59■■□□□ 1.37
LYSMD4Q5XG99 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC23.59■■□□□ 1.37
LYSMD4Q5XG99 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC23.59■■□□□ 1.37
LYSMD4Q5XG99 AP004609.3-201ENST00000610705 1884 ntBASIC23.59■■□□□ 1.37
LYSMD4Q5XG99 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC23.58■■□□□ 1.37
LYSMD4Q5XG99 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC23.58■■□□□ 1.37
LYSMD4Q5XG99 ST7-202ENST00000323984 2142 ntTSL 5 BASIC23.58■■□□□ 1.37
LYSMD4Q5XG99 ST7-207ENST00000393449 2127 ntTSL 5 BASIC23.58■■□□□ 1.37
LYSMD4Q5XG99 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC23.58■■□□□ 1.37
LYSMD4Q5XG99 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC23.57■■□□□ 1.36
LYSMD4Q5XG99 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
LYSMD4Q5XG99 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC23.57■■□□□ 1.36
LYSMD4Q5XG99 MIR4466-201ENST00000606121 54 ntBASIC23.57■■□□□ 1.36
LYSMD4Q5XG99 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
LYSMD4Q5XG99 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
LYSMD4Q5XG99 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC23.57■■□□□ 1.36
LYSMD4Q5XG99 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC23.56■■□□□ 1.36
LYSMD4Q5XG99 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC23.56■■□□□ 1.36
LYSMD4Q5XG99 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC23.56■■□□□ 1.36
LYSMD4Q5XG99 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC23.56■■□□□ 1.36
LYSMD4Q5XG99 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
LYSMD4Q5XG99 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
LYSMD4Q5XG99 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
LYSMD4Q5XG99 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC23.55■■□□□ 1.36
LYSMD4Q5XG99 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC23.55■■□□□ 1.36
LYSMD4Q5XG99 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
LYSMD4Q5XG99 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC23.55■■□□□ 1.36
LYSMD4Q5XG99 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC23.55■■□□□ 1.36
LYSMD4Q5XG99 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
LYSMD4Q5XG99 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC23.54■■□□□ 1.36
LYSMD4Q5XG99 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC23.54■■□□□ 1.36
LYSMD4Q5XG99 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC23.54■■□□□ 1.36
LYSMD4Q5XG99 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC23.54■■□□□ 1.36
LYSMD4Q5XG99 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC23.54■■□□□ 1.36
LYSMD4Q5XG99 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC23.54■■□□□ 1.36
LYSMD4Q5XG99 CLTA-210ENST00000540080 989 ntTSL 2 BASIC23.54■■□□□ 1.36
LYSMD4Q5XG99 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC23.54■■□□□ 1.36
LYSMD4Q5XG99 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC23.53■■□□□ 1.36
LYSMD4Q5XG99 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
LYSMD4Q5XG99 SNAI3-AS1-204ENST00000567997 2048 ntBASIC23.52■■□□□ 1.36
LYSMD4Q5XG99 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC23.52■■□□□ 1.36
LYSMD4Q5XG99 AC139426.1-201ENST00000568218 2529 ntBASIC23.52■■□□□ 1.35
LYSMD4Q5XG99 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC23.51■■□□□ 1.35
LYSMD4Q5XG99 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC23.51■■□□□ 1.35
LYSMD4Q5XG99 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
LYSMD4Q5XG99 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
LYSMD4Q5XG99 CD72-202ENST00000378430 585 ntTSL 3 BASIC23.51■■□□□ 1.35
LYSMD4Q5XG99 AC133561.4-201ENST00000566112 224 ntBASIC23.51■■□□□ 1.35
LYSMD4Q5XG99 AL512631.2-201ENST00000604634 923 ntBASIC23.51■■□□□ 1.35
LYSMD4Q5XG99 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC23.51■■□□□ 1.35
LYSMD4Q5XG99 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC23.5■■□□□ 1.35
LYSMD4Q5XG99 QDPR-206ENST00000508623 601 ntTSL 3 BASIC23.5■■□□□ 1.35
LYSMD4Q5XG99 SSSCA1-AS1-201ENST00000567594 614 ntBASIC23.5■■□□□ 1.35
LYSMD4Q5XG99 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC23.5■■□□□ 1.35
LYSMD4Q5XG99 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
LYSMD4Q5XG99 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC23.49■■□□□ 1.35
LYSMD4Q5XG99 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC23.49■■□□□ 1.35
LYSMD4Q5XG99 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
LYSMD4Q5XG99 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
LYSMD4Q5XG99 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC23.48■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms