Protein–RNA interactions for Protein: Q5VT40

FAM78B, Protein FAM78B, humanhuman

Predictions only

Length 261 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM78BQ5VT40 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
FAM78BQ5VT40 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
FAM78BQ5VT40 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
FAM78BQ5VT40 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
FAM78BQ5VT40 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
FAM78BQ5VT40 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
FAM78BQ5VT40 ZNRF2P2-203ENST00000454624 420 ntBASIC18.66■□□□□ 0.58
FAM78BQ5VT40 CHML-204ENST00000638121 920 ntTSL 2 BASIC18.66■□□□□ 0.58
FAM78BQ5VT40 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
FAM78BQ5VT40 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
FAM78BQ5VT40 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC18.66■□□□□ 0.58
FAM78BQ5VT40 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC18.66■□□□□ 0.58
FAM78BQ5VT40 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
FAM78BQ5VT40 AP003733.4-201ENST00000623785 1697 ntBASIC18.66■□□□□ 0.58
FAM78BQ5VT40 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
FAM78BQ5VT40 CLDN5-201ENST00000403084 2357 ntBASIC18.66■□□□□ 0.58
FAM78BQ5VT40 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
FAM78BQ5VT40 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
FAM78BQ5VT40 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC18.65■□□□□ 0.58
FAM78BQ5VT40 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
FAM78BQ5VT40 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
FAM78BQ5VT40 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC18.65■□□□□ 0.58
FAM78BQ5VT40 EED-207ENST00000528180 1745 ntTSL 5 BASIC18.65■□□□□ 0.58
FAM78BQ5VT40 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
FAM78BQ5VT40 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
FAM78BQ5VT40 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
FAM78BQ5VT40 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
FAM78BQ5VT40 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
FAM78BQ5VT40 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC18.64■□□□□ 0.57
FAM78BQ5VT40 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
FAM78BQ5VT40 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
FAM78BQ5VT40 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
FAM78BQ5VT40 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
FAM78BQ5VT40 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
FAM78BQ5VT40 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
FAM78BQ5VT40 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
FAM78BQ5VT40 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC18.63■□□□□ 0.57
FAM78BQ5VT40 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC18.63■□□□□ 0.57
FAM78BQ5VT40 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
FAM78BQ5VT40 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
FAM78BQ5VT40 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC18.63■□□□□ 0.57
FAM78BQ5VT40 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
FAM78BQ5VT40 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
FAM78BQ5VT40 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC18.62■□□□□ 0.57
FAM78BQ5VT40 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
FAM78BQ5VT40 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
FAM78BQ5VT40 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
FAM78BQ5VT40 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
FAM78BQ5VT40 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
FAM78BQ5VT40 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
FAM78BQ5VT40 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC18.62■□□□□ 0.57
FAM78BQ5VT40 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
FAM78BQ5VT40 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
FAM78BQ5VT40 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
FAM78BQ5VT40 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
FAM78BQ5VT40 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
FAM78BQ5VT40 ABHD17AP4-201ENST00000411545 909 ntBASIC18.61■□□□□ 0.57
FAM78BQ5VT40 DUX4L13-201ENST00000554103 1267 ntBASIC18.61■□□□□ 0.57
FAM78BQ5VT40 DUX4L15-201ENST00000611059 1267 ntBASIC18.61■□□□□ 0.57
FAM78BQ5VT40 DUX4L11-201ENST00000611504 1267 ntBASIC18.61■□□□□ 0.57
FAM78BQ5VT40 DUX4L12-201ENST00000614593 1267 ntBASIC18.61■□□□□ 0.57
FAM78BQ5VT40 DUX4L23-201ENST00000615195 1269 ntBASIC18.61■□□□□ 0.57
FAM78BQ5VT40 DUX4L24-201ENST00000617576 1269 ntBASIC18.61■□□□□ 0.57
FAM78BQ5VT40 DUX4L22-201ENST00000618238 1269 ntBASIC18.61■□□□□ 0.57
FAM78BQ5VT40 DUX4L20-201ENST00000619712 1269 ntBASIC18.61■□□□□ 0.57
FAM78BQ5VT40 DUX4L14-201ENST00000621227 1267 ntBASIC18.61■□□□□ 0.57
FAM78BQ5VT40 DUX4L21-201ENST00000622058 1269 ntBASIC18.61■□□□□ 0.57
FAM78BQ5VT40 DUX4L10-201ENST00000622460 1267 ntBASIC18.61■□□□□ 0.57
FAM78BQ5VT40 DUX4L25-201ENST00000624915 1269 ntBASIC18.61■□□□□ 0.57
FAM78BQ5VT40 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
FAM78BQ5VT40 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
FAM78BQ5VT40 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
FAM78BQ5VT40 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC18.6■□□□□ 0.57
FAM78BQ5VT40 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
FAM78BQ5VT40 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
FAM78BQ5VT40 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC18.6■□□□□ 0.57
FAM78BQ5VT40 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
FAM78BQ5VT40 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
FAM78BQ5VT40 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC18.6■□□□□ 0.57
FAM78BQ5VT40 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
FAM78BQ5VT40 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC18.6■□□□□ 0.57
FAM78BQ5VT40 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
FAM78BQ5VT40 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
FAM78BQ5VT40 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
FAM78BQ5VT40 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC18.59■□□□□ 0.57
FAM78BQ5VT40 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
FAM78BQ5VT40 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
FAM78BQ5VT40 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
FAM78BQ5VT40 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC18.58■□□□□ 0.57
FAM78BQ5VT40 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
FAM78BQ5VT40 CHST11-202ENST00000546689 756 ntTSL 2 BASIC18.58■□□□□ 0.56
FAM78BQ5VT40 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
FAM78BQ5VT40 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
FAM78BQ5VT40 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
FAM78BQ5VT40 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
FAM78BQ5VT40 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
FAM78BQ5VT40 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
FAM78BQ5VT40 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
FAM78BQ5VT40 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
FAM78BQ5VT40 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 146.3 ms