Protein–RNA interactions for Protein: Q5VSP4

LCN1P1, Putative lipocalin 1-like protein 1, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCN1P1Q5VSP4 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC21.34■■□□□ 1.01
LCN1P1Q5VSP4 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC21.34■■□□□ 1.01
LCN1P1Q5VSP4 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC21.34■■□□□ 1.01
LCN1P1Q5VSP4 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC21.34■■□□□ 1.01
LCN1P1Q5VSP4 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC21.34■■□□□ 1.01
LCN1P1Q5VSP4 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
LCN1P1Q5VSP4 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC21.34■■□□□ 1.01
LCN1P1Q5VSP4 AP003733.4-201ENST00000623785 1697 ntBASIC21.34■■□□□ 1.01
LCN1P1Q5VSP4 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
LCN1P1Q5VSP4 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
LCN1P1Q5VSP4 ZNRF2P2-203ENST00000454624 420 ntBASIC21.33■■□□□ 1.01
LCN1P1Q5VSP4 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC21.33■■□□□ 1
LCN1P1Q5VSP4 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
LCN1P1Q5VSP4 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC21.33■■□□□ 1
LCN1P1Q5VSP4 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
LCN1P1Q5VSP4 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC21.32■■□□□ 1
LCN1P1Q5VSP4 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC21.32■■□□□ 1
LCN1P1Q5VSP4 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC21.32■■□□□ 1
LCN1P1Q5VSP4 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
LCN1P1Q5VSP4 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC21.32■■□□□ 1
LCN1P1Q5VSP4 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC21.32■■□□□ 1
LCN1P1Q5VSP4 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
LCN1P1Q5VSP4 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC21.31■■□□□ 1
LCN1P1Q5VSP4 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC21.31■■□□□ 1
LCN1P1Q5VSP4 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
LCN1P1Q5VSP4 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC21.31■■□□□ 1
LCN1P1Q5VSP4 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC21.3■■□□□ 1
LCN1P1Q5VSP4 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC21.3■■□□□ 1
LCN1P1Q5VSP4 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
LCN1P1Q5VSP4 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC21.3■■□□□ 1
LCN1P1Q5VSP4 EED-207ENST00000528180 1745 ntTSL 5 BASIC21.29■■□□□ 1
LCN1P1Q5VSP4 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC21.29■■□□□ 1
LCN1P1Q5VSP4 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC21.29■■□□□ 1
LCN1P1Q5VSP4 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
LCN1P1Q5VSP4 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
LCN1P1Q5VSP4 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
LCN1P1Q5VSP4 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
LCN1P1Q5VSP4 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC21.29■■□□□ 1
LCN1P1Q5VSP4 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
LCN1P1Q5VSP4 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC21.29■■□□□ 1
LCN1P1Q5VSP4 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
LCN1P1Q5VSP4 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
LCN1P1Q5VSP4 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
LCN1P1Q5VSP4 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC21.28■■□□□ 1
LCN1P1Q5VSP4 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC21.28■■□□□ 1
LCN1P1Q5VSP4 LINC00543-201ENST00000567234 1845 ntBASIC21.28■■□□□ 1
LCN1P1Q5VSP4 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
LCN1P1Q5VSP4 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC21.28■■□□□ 1
LCN1P1Q5VSP4 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
LCN1P1Q5VSP4 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC21.28■■□□□ 1
LCN1P1Q5VSP4 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC21.27■■□□□ 1
LCN1P1Q5VSP4 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
LCN1P1Q5VSP4 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC21.27■■□□□ 1
LCN1P1Q5VSP4 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC21.27■■□□□ 1
LCN1P1Q5VSP4 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC21.27■■□□□ 1
LCN1P1Q5VSP4 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC21.27■■□□□ 1
LCN1P1Q5VSP4 CR559946.2-201ENST00000623684 991 ntBASIC21.27■■□□□ 1
LCN1P1Q5VSP4 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC21.27■■□□□ 1
LCN1P1Q5VSP4 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
LCN1P1Q5VSP4 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC21.27■□□□□ 0.99
LCN1P1Q5VSP4 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
LCN1P1Q5VSP4 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
LCN1P1Q5VSP4 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
LCN1P1Q5VSP4 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
LCN1P1Q5VSP4 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
LCN1P1Q5VSP4 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC21.26■□□□□ 0.99
LCN1P1Q5VSP4 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
LCN1P1Q5VSP4 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
LCN1P1Q5VSP4 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC21.25■□□□□ 0.99
LCN1P1Q5VSP4 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC21.25■□□□□ 0.99
LCN1P1Q5VSP4 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC21.25■□□□□ 0.99
LCN1P1Q5VSP4 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
LCN1P1Q5VSP4 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
LCN1P1Q5VSP4 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
LCN1P1Q5VSP4 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC21.24■□□□□ 0.99
LCN1P1Q5VSP4 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
LCN1P1Q5VSP4 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
LCN1P1Q5VSP4 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
LCN1P1Q5VSP4 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC21.24■□□□□ 0.99
LCN1P1Q5VSP4 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
LCN1P1Q5VSP4 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
LCN1P1Q5VSP4 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
LCN1P1Q5VSP4 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
LCN1P1Q5VSP4 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
LCN1P1Q5VSP4 AC079834.2-201ENST00000609776 1949 ntBASIC21.23■□□□□ 0.99
LCN1P1Q5VSP4 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
LCN1P1Q5VSP4 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC21.23■□□□□ 0.99
LCN1P1Q5VSP4 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
LCN1P1Q5VSP4 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
LCN1P1Q5VSP4 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
LCN1P1Q5VSP4 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
LCN1P1Q5VSP4 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC21.23■□□□□ 0.99
LCN1P1Q5VSP4 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
LCN1P1Q5VSP4 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
LCN1P1Q5VSP4 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
LCN1P1Q5VSP4 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC21.22■□□□□ 0.99
LCN1P1Q5VSP4 LINC01124-201ENST00000409786 2117 ntBASIC21.22■□□□□ 0.99
LCN1P1Q5VSP4 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
LCN1P1Q5VSP4 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
LCN1P1Q5VSP4 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms