Protein–RNA interactions for Protein: Q53RY4

KRTCAP3, Keratinocyte-associated protein 3, humanhuman

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTCAP3Q53RY4 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC21.43■■□□□ 1.02
KRTCAP3Q53RY4 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC21.43■■□□□ 1.02
KRTCAP3Q53RY4 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
KRTCAP3Q53RY4 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC21.42■■□□□ 1.02
KRTCAP3Q53RY4 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC21.42■■□□□ 1.02
KRTCAP3Q53RY4 PEMT-206ENST00000435340 960 ntTSL 5 BASIC21.42■■□□□ 1.02
KRTCAP3Q53RY4 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC21.42■■□□□ 1.02
KRTCAP3Q53RY4 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
KRTCAP3Q53RY4 LSM7-203ENST00000585409 512 ntTSL 2 BASIC21.42■■□□□ 1.02
KRTCAP3Q53RY4 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
KRTCAP3Q53RY4 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
KRTCAP3Q53RY4 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
KRTCAP3Q53RY4 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
KRTCAP3Q53RY4 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC21.41■■□□□ 1.02
KRTCAP3Q53RY4 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC21.41■■□□□ 1.02
KRTCAP3Q53RY4 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC21.41■■□□□ 1.02
KRTCAP3Q53RY4 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC21.4■■□□□ 1.02
KRTCAP3Q53RY4 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
KRTCAP3Q53RY4 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
KRTCAP3Q53RY4 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC21.4■■□□□ 1.02
KRTCAP3Q53RY4 SSSCA1-AS1-201ENST00000567594 614 ntBASIC21.4■■□□□ 1.02
KRTCAP3Q53RY4 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC21.4■■□□□ 1.02
KRTCAP3Q53RY4 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC21.4■■□□□ 1.02
KRTCAP3Q53RY4 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
KRTCAP3Q53RY4 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
KRTCAP3Q53RY4 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
KRTCAP3Q53RY4 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
KRTCAP3Q53RY4 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
KRTCAP3Q53RY4 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
KRTCAP3Q53RY4 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
KRTCAP3Q53RY4 GAK-223ENST00000628912 497 ntTSL 5 BASIC21.38■■□□□ 1.01
KRTCAP3Q53RY4 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
KRTCAP3Q53RY4 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
KRTCAP3Q53RY4 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC21.37■■□□□ 1.01
KRTCAP3Q53RY4 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC21.37■■□□□ 1.01
KRTCAP3Q53RY4 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
KRTCAP3Q53RY4 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
KRTCAP3Q53RY4 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC21.37■■□□□ 1.01
KRTCAP3Q53RY4 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
KRTCAP3Q53RY4 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC21.37■■□□□ 1.01
KRTCAP3Q53RY4 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
KRTCAP3Q53RY4 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
KRTCAP3Q53RY4 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC21.36■■□□□ 1.01
KRTCAP3Q53RY4 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
KRTCAP3Q53RY4 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC21.36■■□□□ 1.01
KRTCAP3Q53RY4 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
KRTCAP3Q53RY4 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
KRTCAP3Q53RY4 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
KRTCAP3Q53RY4 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC21.35■■□□□ 1.01
KRTCAP3Q53RY4 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC21.35■■□□□ 1.01
KRTCAP3Q53RY4 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
KRTCAP3Q53RY4 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC21.34■■□□□ 1.01
KRTCAP3Q53RY4 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC21.34■■□□□ 1.01
KRTCAP3Q53RY4 AC010997.5-201ENST00000609182 354 ntBASIC21.34■■□□□ 1.01
KRTCAP3Q53RY4 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC21.34■■□□□ 1.01
KRTCAP3Q53RY4 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
KRTCAP3Q53RY4 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
KRTCAP3Q53RY4 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC21.33■■□□□ 1.01
KRTCAP3Q53RY4 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1
KRTCAP3Q53RY4 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC21.32■■□□□ 1
KRTCAP3Q53RY4 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC21.32■■□□□ 1
KRTCAP3Q53RY4 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
KRTCAP3Q53RY4 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
KRTCAP3Q53RY4 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC21.32■■□□□ 1
KRTCAP3Q53RY4 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC21.32■■□□□ 1
KRTCAP3Q53RY4 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC21.31■■□□□ 1
KRTCAP3Q53RY4 TK2-202ENST00000417693 1046 ntTSL 2 BASIC21.31■■□□□ 1
KRTCAP3Q53RY4 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC21.31■■□□□ 1
KRTCAP3Q53RY4 SRR-208ENST00000576848 588 ntTSL 4 BASIC21.31■■□□□ 1
KRTCAP3Q53RY4 MTDHP2-201ENST00000601468 714 ntBASIC21.31■■□□□ 1
KRTCAP3Q53RY4 MIR6724-1-201ENST00000616420 92 ntBASIC21.31■■□□□ 1
KRTCAP3Q53RY4 MIR6724-2-201ENST00000616483 92 ntBASIC21.31■■□□□ 1
KRTCAP3Q53RY4 MIR6724-4-201ENST00000617390 92 ntBASIC21.31■■□□□ 1
KRTCAP3Q53RY4 MIR6724-3-201ENST00000622482 92 ntBASIC21.31■■□□□ 1
KRTCAP3Q53RY4 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
KRTCAP3Q53RY4 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
KRTCAP3Q53RY4 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC21.3■■□□□ 1
KRTCAP3Q53RY4 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC21.3■■□□□ 1
KRTCAP3Q53RY4 RPP21-222ENST00000433076 577 ntTSL 2 BASIC21.3■■□□□ 1
KRTCAP3Q53RY4 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC21.3■■□□□ 1
KRTCAP3Q53RY4 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC21.3■■□□□ 1
KRTCAP3Q53RY4 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
KRTCAP3Q53RY4 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
KRTCAP3Q53RY4 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC21.29■■□□□ 1
KRTCAP3Q53RY4 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
KRTCAP3Q53RY4 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
KRTCAP3Q53RY4 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC21.29■■□□□ 1
KRTCAP3Q53RY4 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC21.29■■□□□ 1
KRTCAP3Q53RY4 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC21.29■■□□□ 1
KRTCAP3Q53RY4 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC21.29■■□□□ 1
KRTCAP3Q53RY4 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC21.28■■□□□ 1
KRTCAP3Q53RY4 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC21.28■■□□□ 1
KRTCAP3Q53RY4 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC21.28■■□□□ 1
KRTCAP3Q53RY4 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC21.28■■□□□ 1
KRTCAP3Q53RY4 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC21.28■■□□□ 1
KRTCAP3Q53RY4 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC21.28■■□□□ 1
KRTCAP3Q53RY4 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC21.28■■□□□ 1
KRTCAP3Q53RY4 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC21.28■■□□□ 1
KRTCAP3Q53RY4 AL356740.2-201ENST00000601559 647 ntBASIC21.28■■□□□ 1
KRTCAP3Q53RY4 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms