Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC20.4■□□□□ 0.86
SFTPBP07988 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC20.4■□□□□ 0.86
SFTPBP07988 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
SFTPBP07988 AC022211.4-201ENST00000625094 2161 ntBASIC20.4■□□□□ 0.86
SFTPBP07988 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
SFTPBP07988 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SFTPBP07988 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC20.39■□□□□ 0.85
SFTPBP07988 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC20.39■□□□□ 0.85
SFTPBP07988 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
SFTPBP07988 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SFTPBP07988 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
SFTPBP07988 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
SFTPBP07988 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SFTPBP07988 AC142381.3-201ENST00000568208 1670 ntBASIC20.38■□□□□ 0.85
SFTPBP07988 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC20.38■□□□□ 0.85
SFTPBP07988 LTK-203ENST00000453182 2412 ntTSL 2 BASIC20.38■□□□□ 0.85
SFTPBP07988 MED17-227ENST00000640521 2047 ntTSL 5 BASIC20.38■□□□□ 0.85
SFTPBP07988 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC20.38■□□□□ 0.85
SFTPBP07988 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SFTPBP07988 ECEL1P2-201ENST00000461596 1295 ntBASIC20.38■□□□□ 0.85
SFTPBP07988 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
SFTPBP07988 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SFTPBP07988 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SFTPBP07988 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC20.38■□□□□ 0.85
SFTPBP07988 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
SFTPBP07988 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SFTPBP07988 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC20.37■□□□□ 0.85
SFTPBP07988 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SFTPBP07988 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SFTPBP07988 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC20.37■□□□□ 0.85
SFTPBP07988 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
SFTPBP07988 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
SFTPBP07988 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SFTPBP07988 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC20.36■□□□□ 0.85
SFTPBP07988 AC025884.2-201ENST00000553429 711 ntBASIC20.36■□□□□ 0.85
SFTPBP07988 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SFTPBP07988 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
SFTPBP07988 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SFTPBP07988 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SFTPBP07988 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
SFTPBP07988 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
SFTPBP07988 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SFTPBP07988 AC138932.3-201ENST00000567634 1902 ntBASIC20.35■□□□□ 0.85
SFTPBP07988 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SFTPBP07988 HYI-213ENST00000583037 1322 ntTSL 5 BASIC20.34■□□□□ 0.85
SFTPBP07988 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SFTPBP07988 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
SFTPBP07988 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SFTPBP07988 PFN2-211ENST00000489155 636 ntTSL 4 BASIC20.34■□□□□ 0.85
SFTPBP07988 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SFTPBP07988 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
SFTPBP07988 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SFTPBP07988 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
SFTPBP07988 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SFTPBP07988 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
SFTPBP07988 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC20.33■□□□□ 0.85
SFTPBP07988 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
SFTPBP07988 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SFTPBP07988 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SFTPBP07988 THRA-202ENST00000394121 2260 ntTSL 2 BASIC20.33■□□□□ 0.84
SFTPBP07988 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
SFTPBP07988 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
SFTPBP07988 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC20.33■□□□□ 0.84
SFTPBP07988 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SFTPBP07988 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SFTPBP07988 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
SFTPBP07988 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC20.32■□□□□ 0.84
SFTPBP07988 NTF6A-201ENST00000591175 560 ntBASIC20.32■□□□□ 0.84
SFTPBP07988 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC20.32■□□□□ 0.84
SFTPBP07988 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
SFTPBP07988 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
SFTPBP07988 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SFTPBP07988 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC20.32■□□□□ 0.84
SFTPBP07988 SMPD5-203ENST00000639008 1464 ntBASIC20.31■□□□□ 0.84
SFTPBP07988 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC20.31■□□□□ 0.84
SFTPBP07988 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SFTPBP07988 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SFTPBP07988 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC20.31■□□□□ 0.84
SFTPBP07988 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SFTPBP07988 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC20.31■□□□□ 0.84
SFTPBP07988 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SFTPBP07988 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
SFTPBP07988 AC097639.1-201ENST00000565519 1891 ntBASIC20.3■□□□□ 0.84
SFTPBP07988 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SFTPBP07988 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SFTPBP07988 MIR3960-201ENST00000583311 91 ntBASIC20.3■□□□□ 0.84
SFTPBP07988 U85056.1-201ENST00000616429 682 ntBASIC20.3■□□□□ 0.84
SFTPBP07988 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC20.3■□□□□ 0.84
SFTPBP07988 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SFTPBP07988 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC20.29■□□□□ 0.84
SFTPBP07988 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SFTPBP07988 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
SFTPBP07988 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SFTPBP07988 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
SFTPBP07988 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SFTPBP07988 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SFTPBP07988 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
SFTPBP07988 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
SFTPBP07988 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SFTPBP07988 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms