Protein–RNA interactions for Protein: A1L188

NDUFAF8, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 8, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFAF8A1L188 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
NDUFAF8A1L188 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
NDUFAF8A1L188 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
NDUFAF8A1L188 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
NDUFAF8A1L188 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC10.15□□□□□ -0.78
NDUFAF8A1L188 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC10.15□□□□□ -0.78
NDUFAF8A1L188 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC10.15□□□□□ -0.78
NDUFAF8A1L188 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
NDUFAF8A1L188 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
NDUFAF8A1L188 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
NDUFAF8A1L188 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
NDUFAF8A1L188 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC10.15□□□□□ -0.78
NDUFAF8A1L188 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
NDUFAF8A1L188 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
NDUFAF8A1L188 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
NDUFAF8A1L188 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
NDUFAF8A1L188 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
NDUFAF8A1L188 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
NDUFAF8A1L188 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC10.14□□□□□ -0.79
NDUFAF8A1L188 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
NDUFAF8A1L188 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
NDUFAF8A1L188 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC10.14□□□□□ -0.79
NDUFAF8A1L188 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
NDUFAF8A1L188 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
NDUFAF8A1L188 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
NDUFAF8A1L188 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC10.14□□□□□ -0.79
NDUFAF8A1L188 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
NDUFAF8A1L188 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
NDUFAF8A1L188 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
NDUFAF8A1L188 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC10.14□□□□□ -0.79
NDUFAF8A1L188 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
NDUFAF8A1L188 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC10.14□□□□□ -0.79
NDUFAF8A1L188 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
NDUFAF8A1L188 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
NDUFAF8A1L188 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
NDUFAF8A1L188 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
NDUFAF8A1L188 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC10.13□□□□□ -0.79
NDUFAF8A1L188 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
NDUFAF8A1L188 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
NDUFAF8A1L188 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
NDUFAF8A1L188 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
NDUFAF8A1L188 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC10.13□□□□□ -0.79
NDUFAF8A1L188 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
NDUFAF8A1L188 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
NDUFAF8A1L188 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC10.13□□□□□ -0.79
NDUFAF8A1L188 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC10.13□□□□□ -0.79
NDUFAF8A1L188 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC10.13□□□□□ -0.79
NDUFAF8A1L188 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC10.13□□□□□ -0.79
NDUFAF8A1L188 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC10.13□□□□□ -0.79
NDUFAF8A1L188 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC10.12□□□□□ -0.79
NDUFAF8A1L188 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
NDUFAF8A1L188 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC10.12□□□□□ -0.79
NDUFAF8A1L188 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC10.12□□□□□ -0.79
NDUFAF8A1L188 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
NDUFAF8A1L188 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC10.12□□□□□ -0.79
NDUFAF8A1L188 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC10.12□□□□□ -0.79
NDUFAF8A1L188 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC10.12□□□□□ -0.79
NDUFAF8A1L188 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC10.11□□□□□ -0.79
NDUFAF8A1L188 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
NDUFAF8A1L188 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
NDUFAF8A1L188 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
NDUFAF8A1L188 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
NDUFAF8A1L188 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
NDUFAF8A1L188 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC10.11□□□□□ -0.79
NDUFAF8A1L188 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
NDUFAF8A1L188 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
NDUFAF8A1L188 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
NDUFAF8A1L188 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC10.11□□□□□ -0.79
NDUFAF8A1L188 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
NDUFAF8A1L188 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC10.1□□□□□ -0.79
NDUFAF8A1L188 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
NDUFAF8A1L188 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
NDUFAF8A1L188 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC10.1□□□□□ -0.79
NDUFAF8A1L188 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
NDUFAF8A1L188 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC10.1□□□□□ -0.79
NDUFAF8A1L188 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
NDUFAF8A1L188 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
NDUFAF8A1L188 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC10.1□□□□□ -0.79
NDUFAF8A1L188 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
NDUFAF8A1L188 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
NDUFAF8A1L188 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
NDUFAF8A1L188 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC10.1□□□□□ -0.79
NDUFAF8A1L188 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
NDUFAF8A1L188 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
NDUFAF8A1L188 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
NDUFAF8A1L188 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC10.09□□□□□ -0.79
NDUFAF8A1L188 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
NDUFAF8A1L188 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC10.09□□□□□ -0.79
NDUFAF8A1L188 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC10.09□□□□□ -0.79
NDUFAF8A1L188 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC10.09□□□□□ -0.79
NDUFAF8A1L188 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC10.09□□□□□ -0.79
NDUFAF8A1L188 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC10.09□□□□□ -0.79
NDUFAF8A1L188 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
NDUFAF8A1L188 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
NDUFAF8A1L188 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
NDUFAF8A1L188 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC10.09□□□□□ -0.79
NDUFAF8A1L188 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
NDUFAF8A1L188 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
NDUFAF8A1L188 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
NDUFAF8A1L188 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC10.09□□□□□ -0.79
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms