RNA–Protein interactions for RNA: ENST00000635727.1

CACNA1A-215, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,536 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-215ENST00000635727 DCAF8L2P0C7V8 631 aa30.32■■■□□ 2.44
CACNA1A-215ENST00000635727 EHMT2Q96KQ7 1210 aa28.96■■■□□ 2.23
CACNA1A-215ENST00000635727 SUPT5HO00267 1087 aaKnown RBP28.15■■■□□ 2.1
CACNA1A-215ENST00000635727 PELP1Q8IZL8 1130 aaKnown RBP28.02■■■□□ 2.08
CACNA1A-215ENST00000635727 TTBK1Q5TCY1 1321 aaPredicted RBP27.88■■■□□ 2.05
CACNA1A-215ENST00000635727 ERICH6Q7L0X2 663 aa27.67■■■□□ 2.02
CACNA1A-215ENST00000635727 SHROOM4Q9ULL8 1493 aa27.45■■□□□ 1.99
CACNA1A-215ENST00000635727 RANGAP1P46060 587 aaPredicted RBP27.37■■□□□ 1.97
CACNA1A-215ENST00000635727 MYT1Q01538 1121 aa27.37■■□□□ 1.97
CACNA1A-215ENST00000635727 APLP2Q06481 763 aa27.31■■□□□ 1.96
CACNA1A-215ENST00000635727 ATP1B4Q9UN42 357 aaPredicted RBP27.11■■□□□ 1.93
CACNA1A-215ENST00000635727 FAM9AQ8IZU1 332 aaPredicted RBP27.07■■□□□ 1.92
CACNA1A-215ENST00000635727 PCGF6Q9BYE7 350 aa26.92■■□□□ 1.9
CACNA1A-215ENST00000635727 CCER1Q8TC90 406 aaPredicted RBP26.86■■□□□ 1.89
CACNA1A-215ENST00000635727 YTHDC1Q96MU7 727 aaKnown RBP26.75■■□□□ 1.87
CACNA1A-215ENST00000635727 CHIC1Q5VXU3 224 aa26.54■■□□□ 1.84
CACNA1A-215ENST00000635727 CNGB1Q14028 1251 aaPredicted RBP26.49■■□□□ 1.83
CACNA1A-215ENST00000635727 POLR3GLQ9BT43 218 aa26.38■■□□□ 1.81
CACNA1A-215ENST00000635727 CENPBP07199 599 aaPredicted RBP26.37■■□□□ 1.81
CACNA1A-215ENST00000635727 NEFLP07196 543 aa26.35■■□□□ 1.81
CACNA1A-215ENST00000635727 MYT1LQ9UL68 1186 aa26.34■■□□□ 1.81
CACNA1A-215ENST00000635727 DAXXQ9UER7 740 aaPredicted RBP26.24■■□□□ 1.79
CACNA1A-215ENST00000635727 PPARGC1BQ86YN6 1023 aaKnown RBP26.16■■□□□ 1.78
CACNA1A-215ENST00000635727 SLC4A1APQ9BWU0 796 aaKnown RBP26.11■■□□□ 1.77
CACNA1A-215ENST00000635727 UBTFP17480 764 aaKnown RBP25.88■■□□□ 1.73
CACNA1A-215ENST00000635727 ITGAEP38570 1179 aa25.82■■□□□ 1.72
CACNA1A-215ENST00000635727 BCL11AQ9H165 835 aa25.78■■□□□ 1.72
CACNA1A-215ENST00000635727 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.75■■□□□ 1.71
CACNA1A-215ENST00000635727 HNRNPUL2Q1KMD3 747 aaKnown RBP25.75■■□□□ 1.71
CACNA1A-215ENST00000635727 CLSPNQ9HAW4 1339 aa25.63■■□□□ 1.69
CACNA1A-215ENST00000635727 ZNF316A6NFI3 1004 aaPredicted RBP25.59■■□□□ 1.69
CACNA1A-215ENST00000635727 TRIM41Q8WV44 630 aa25.56■■□□□ 1.68
CACNA1A-215ENST00000635727 SLC24A1O60721 1099 aa25.54■■□□□ 1.68
CACNA1A-215ENST00000635727 ZEB1P37275 1124 aaPredicted RBP25.41■■□□□ 1.66
CACNA1A-215ENST00000635727 RTL5Q5HYW3 569 aaPredicted RBP25.25■■□□□ 1.63
CACNA1A-215ENST00000635727 BCANQ96GW7 911 aa25.05■■□□□ 1.6
CACNA1A-215ENST00000635727 ZBTB47Q9UFB7 747 aaPredicted RBP24.91■■□□□ 1.58
CACNA1A-215ENST00000635727 PLPPR3Q6T4P5 718 aa24.89■■□□□ 1.58
CACNA1A-215ENST00000635727 ZNF326Q5BKZ1 582 aaKnown RBP24.8■■□□□ 1.56
CACNA1A-215ENST00000635727 NEUROD1Q13562 356 aa24.72■■□□□ 1.55
CACNA1A-215ENST00000635727 CANXP27824 592 aaKnown RBP24.7■■□□□ 1.54
CACNA1A-215ENST00000635727 TRIM52Q96A61 297 aa24.7■■□□□ 1.54
CACNA1A-215ENST00000635727 FAM50AQ14320 339 aaKnown RBP24.66■■□□□ 1.54
CACNA1A-215ENST00000635727 HRCP23327 699 aa24.63■■□□□ 1.53
CACNA1A-215ENST00000635727 NISCHQ9Y2I1 1504 aa24.59■■□□□ 1.53
CACNA1A-215ENST00000635727 NPM2Q86SE8 214 aaKnown RBP24.57■■□□□ 1.52
CACNA1A-215ENST00000635727 EIF5BO60841 1220 aaKnown RBP24.56■■□□□ 1.52
CACNA1A-215ENST00000635727 TRIM26Q12899 539 aaPredicted RBP24.49■■□□□ 1.51
CACNA1A-215ENST00000635727 LOC105371045A0A1W2PR82 267 aa24.46■■□□□ 1.51
CACNA1A-215ENST00000635727 ARXQ96QS3 562 aa24.46■■□□□ 1.51
CACNA1A-215ENST00000635727 A0A0G2JS52 829 aa24.42■■□□□ 1.5
CACNA1A-215ENST00000635727 PLEKHG5O94827 1062 aa24.37■■□□□ 1.49
CACNA1A-215ENST00000635727 TULP1O00294 542 aaPredicted RBP24.35■■□□□ 1.49
CACNA1A-215ENST00000635727 DIEXFQ68CQ4 756 aaKnown RBP24.35■■□□□ 1.49
CACNA1A-215ENST00000635727 CDK11AQ9UQ88 783 aaPredicted RBP24.35■■□□□ 1.49
CACNA1A-215ENST00000635727 ARID3CA6NKF2 412 aa24.32■■□□□ 1.48
CACNA1A-215ENST00000635727 FBLN2P98095 1184 aa24.32■■□□□ 1.48
CACNA1A-215ENST00000635727 SCAF1Q9H7N4 1312 aaKnown RBP24.29■■□□□ 1.48
CACNA1A-215ENST00000635727 NEFMP07197 916 aa24.27■■□□□ 1.48
CACNA1A-215ENST00000635727 HSP90AA1P07900 732 aaKnown RBP24.24■■□□□ 1.47
CACNA1A-215ENST00000635727 SENP3Q9H4L4 574 aaPredicted RBP24.2■■□□□ 1.46
CACNA1A-215ENST00000635727 ANP32CO43423 234 aa24.12■■□□□ 1.45
CACNA1A-215ENST00000635727 GTF3C3Q9Y5Q9 886 aa24.12■■□□□ 1.45
CACNA1A-215ENST00000635727 NCBP3Q53F19 620 aaKnown RBP24.11■■□□□ 1.45
CACNA1A-215ENST00000635727 SALL2Q9Y467 1007 aaPredicted RBP24.11■■□□□ 1.45
CACNA1A-215ENST00000635727 ANP32BQ92688 251 aaKnown RBP24.1■■□□□ 1.45
CACNA1A-215ENST00000635727 ZBTB7CA1YPR0 619 aa24.03■■□□□ 1.44
CACNA1A-215ENST00000635727 CHGAP10645 457 aaKnown RBP24.02■■□□□ 1.44
CACNA1A-215ENST00000635727 ANP32AP39687 249 aaKnown RBP24.02■■□□□ 1.44
CACNA1A-215ENST00000635727 CDK11BP21127 795 aaKnown RBP24■■□□□ 1.43
CACNA1A-215ENST00000635727 TPRNQ4KMQ1 711 aa24■■□□□ 1.43
CACNA1A-215ENST00000635727 NBR1Q14596 966 aa23.97■■□□□ 1.43
CACNA1A-215ENST00000635727 STAG3Q9UJ98 1225 aa23.94■■□□□ 1.42
CACNA1A-215ENST00000635727 TAOK2Q9UL54 1235 aa23.91■■□□□ 1.42
CACNA1A-215ENST00000635727 ZNF777Q9ULD5 760 aaPredicted RBP23.9■■□□□ 1.42
CACNA1A-215ENST00000635727 ESF1Q9H501 851 aaKnown RBP23.89■■□□□ 1.41
CACNA1A-215ENST00000635727 P3H3Q8IVL6 736 aa23.85■■□□□ 1.41
CACNA1A-215ENST00000635727 C14orf37Q86TY3 774 aa23.68■■□□□ 1.38
CACNA1A-215ENST00000635727 UPF2Q9HAU5 1272 aaKnown RBP23.67■■□□□ 1.38
CACNA1A-215ENST00000635727 FAM9BQ8IZU0 186 aa23.64■■□□□ 1.38
CACNA1A-215ENST00000635727 FKBP8Q14318 412 aa23.62■■□□□ 1.37
CACNA1A-215ENST00000635727 AMER1Q5JTC6 1135 aaPredicted RBP23.61■■□□□ 1.37
CACNA1A-215ENST00000635727 GLIPR1L2Q4G1C9 344 aa23.59■■□□□ 1.37
CACNA1A-215ENST00000635727 SENP3-EIF4A1A0A087X0R7 540 aa23.56■■□□□ 1.36
CACNA1A-215ENST00000635727 PABPN1Q86U42 306 aaKnown RBP eCLIP23.54■■□□□ 1.36
CACNA1A-215ENST00000635727 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.52■■□□□ 1.36
CACNA1A-215ENST00000635727 IRX6P78412 446 aaPredicted RBP23.51■■□□□ 1.35
CACNA1A-215ENST00000635727 NCLP19338 710 aaKnown RBP23.44■■□□□ 1.34
CACNA1A-215ENST00000635727 CLSTN1O94985 981 aa23.42■■□□□ 1.34
CACNA1A-215ENST00000635727 HNRNPUQ00839 825 aaKnown RBP eCLIP23.41■■□□□ 1.34
CACNA1A-215ENST00000635727 HAP1P54257 671 aaPredicted RBP23.39■■□□□ 1.34
CACNA1A-215ENST00000635727 NPHP1O15259 732 aa23.37■■□□□ 1.33
CACNA1A-215ENST00000635727 KDM2AQ9Y2K7 1162 aa23.35■■□□□ 1.33
CACNA1A-215ENST00000635727 DNTTIP2Q5QJE6 756 aaKnown RBP23.3■■□□□ 1.32
CACNA1A-215ENST00000635727 CCDC136Q96JN2 1154 aa23.29■■□□□ 1.32
CACNA1A-215ENST00000635727 MYH16Q9H6N6 1097 aa23.28■■□□□ 1.32
CACNA1A-215ENST00000635727 PLCB2Q00722 1185 aa23.26■■□□□ 1.31
CACNA1A-215ENST00000635727 WDR43Q15061 677 aaKnown RBP eCLIP23.26■■□□□ 1.31
CACNA1A-215ENST00000635727 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.25■■□□□ 1.31
CACNA1A-215ENST00000635727 PTMAP06454 111 aaKnown RBP23.23■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms