RNA–Protein interactions for RNA: ENST00000348403.9

STRBP-201, Transcript of spermatid perinuclear RNA binding protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene STRBP, Length 3,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRBP-201ENST00000348403 NISCHQ9Y2I1 1504 aa37.95■■■■□ 3.67
STRBP-201ENST00000348403 SHROOM4Q9ULL8 1493 aa33.04■■■□□ 2.88
STRBP-201ENST00000348403 CCDC180Q9P1Z9 1646 aa32.76■■■□□ 2.84
STRBP-201ENST00000348403 SUPT5HO00267 1087 aaKnown RBP32.76■■■□□ 2.83
STRBP-201ENST00000348403 HRCP23327 699 aa32.22■■■□□ 2.75
STRBP-201ENST00000348403 DCAF8L2P0C7V8 631 aa32.03■■■□□ 2.72
STRBP-201ENST00000348403 MYO15BQ96JP2 1530 aa32.01■■■□□ 2.72
STRBP-201ENST00000348403 PCGF6Q9BYE7 350 aa31.95■■■□□ 2.7
STRBP-201ENST00000348403 CHIC1Q5VXU3 224 aa31.92■■■□□ 2.7
STRBP-201ENST00000348403 ZCCHC6Q5VYS8 1495 aaKnown RBP31.85■■■□□ 2.69
STRBP-201ENST00000348403 PPARGC1BQ86YN6 1023 aaKnown RBP31.76■■■□□ 2.68
STRBP-201ENST00000348403 ABCC9O60706 1549 aa31.42■■■□□ 2.62
STRBP-201ENST00000348403 LOC105371045A0A1W2PR82 267 aa31.27■■■□□ 2.6
STRBP-201ENST00000348403 DCAF1Q9Y4B6 1507 aa31.09■■■□□ 2.57
STRBP-201ENST00000348403 TRIM26Q12899 539 aaPredicted RBP30.89■■■□□ 2.54
STRBP-201ENST00000348403 SCRIBQ14160 1630 aa30.59■■■□□ 2.49
STRBP-201ENST00000348403 NACADO15069 1562 aa30.59■■■□□ 2.49
STRBP-201ENST00000348403 ZEB1P37275 1124 aaPredicted RBP30.42■■■□□ 2.46
STRBP-201ENST00000348403 RB1CC1Q8TDY2 1594 aa30.37■■■□□ 2.45
STRBP-201ENST00000348403 FAM9AQ8IZU1 332 aaPredicted RBP30.35■■■□□ 2.45
STRBP-201ENST00000348403 EHMT2Q96KQ7 1210 aa30.32■■■□□ 2.44
STRBP-201ENST00000348403 SCAF1Q9H7N4 1312 aaKnown RBP30.29■■■□□ 2.44
STRBP-201ENST00000348403 PELP1Q8IZL8 1130 aaKnown RBP30.28■■■□□ 2.44
STRBP-201ENST00000348403 TRIM41Q8WV44 630 aa30.25■■■□□ 2.43
STRBP-201ENST00000348403 RSF1Q96T23 1441 aaPredicted RBP29.97■■■□□ 2.39
STRBP-201ENST00000348403 PABPN1Q86U42 306 aaKnown RBP eCLIP29.85■■■□□ 2.37
STRBP-201ENST00000348403 UNC13AQ9UPW8 1703 aa29.81■■■□□ 2.36
STRBP-201ENST00000348403 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.78■■■□□ 2.36
STRBP-201ENST00000348403 CECR2Q9BXF3 1484 aa29.7■■■□□ 2.34
STRBP-201ENST00000348403 CCER1Q8TC90 406 aaPredicted RBP29.68■■■□□ 2.34
STRBP-201ENST00000348403 NEUROD1Q13562 356 aa29.66■■■□□ 2.34
STRBP-201ENST00000348403 ACIN1Q9UKV3 1341 aaKnown RBP29.66■■■□□ 2.34
STRBP-201ENST00000348403 TTBK1Q5TCY1 1321 aaPredicted RBP29.49■■■□□ 2.31
STRBP-201ENST00000348403 BICRAQ9NZM4 1560 aa29.49■■■□□ 2.31
STRBP-201ENST00000348403 GTF3C3Q9Y5Q9 886 aa29.47■■■□□ 2.31
STRBP-201ENST00000348403 MROH2BQ7Z745 1585 aa29.46■■■□□ 2.31
STRBP-201ENST00000348403 DIEXFQ68CQ4 756 aaKnown RBP29.45■■■□□ 2.3
STRBP-201ENST00000348403 CENPBP07199 599 aaPredicted RBP29.35■■■□□ 2.29
STRBP-201ENST00000348403 BAZ1AQ9NRL2 1556 aaPredicted RBP29.25■■■□□ 2.27
STRBP-201ENST00000348403 WIZO95785 1651 aa29.25■■■□□ 2.27
STRBP-201ENST00000348403 SMARCA4P51532 1647 aa29.13■■■□□ 2.25
STRBP-201ENST00000348403 YTHDC1Q96MU7 727 aaKnown RBP29.08■■■□□ 2.25
STRBP-201ENST00000348403 ZNF316A6NFI3 1004 aaPredicted RBP28.94■■■□□ 2.22
STRBP-201ENST00000348403 CEP162Q5TB80 1403 aa28.9■■■□□ 2.22
STRBP-201ENST00000348403 MYT1Q01538 1121 aa28.89■■■□□ 2.22
STRBP-201ENST00000348403 ABCC8Q09428 1581 aa28.86■■■□□ 2.21
STRBP-201ENST00000348403 CCDC88BA6NC98 1476 aa28.84■■■□□ 2.21
STRBP-201ENST00000348403 WRNQ14191 1432 aaPredicted RBP eCLIP28.84■■■□□ 2.21
STRBP-201ENST00000348403 UBTFP17480 764 aaKnown RBP28.81■■■□□ 2.2
STRBP-201ENST00000348403 EIF4G1Q04637 1599 aaKnown RBP28.78■■■□□ 2.2
STRBP-201ENST00000348403 MIER1Q8N108 512 aa28.76■■■□□ 2.2
STRBP-201ENST00000348403 TOP2AP11388 1531 aaKnown RBP28.75■■■□□ 2.19
STRBP-201ENST00000348403 SOGA1O94964 1423 aa28.75■■■□□ 2.19
STRBP-201ENST00000348403 HNRNPUL2Q1KMD3 747 aaKnown RBP28.71■■■□□ 2.19
STRBP-201ENST00000348403 ATAD2BQ9ULI0 1458 aa28.68■■■□□ 2.18
STRBP-201ENST00000348403 TNIKQ9UKE5 1360 aa28.67■■■□□ 2.18
STRBP-201ENST00000348403 CSRNP3Q8WYN3 585 aa28.63■■■□□ 2.17
STRBP-201ENST00000348403 RUSC2Q8N2Y8 1516 aa28.6■■■□□ 2.17
STRBP-201ENST00000348403 BAZ1BQ9UIG0 1483 aaKnown RBP28.57■■■□□ 2.16
STRBP-201ENST00000348403 PEG3Q9GZU2 1588 aa28.57■■■□□ 2.16
STRBP-201ENST00000348403 SMARCA2P51531 1590 aa28.56■■■□□ 2.16
STRBP-201ENST00000348403 GOLGA3Q08378 1498 aa28.39■■■□□ 2.13
STRBP-201ENST00000348403 EEA1Q15075 1411 aa28.37■■■□□ 2.13
STRBP-201ENST00000348403 RANGAP1P46060 587 aaPredicted RBP28.36■■■□□ 2.13
STRBP-201ENST00000348403 NCAPD3P42695 1498 aa28.3■■■□□ 2.12
STRBP-201ENST00000348403 APLP2Q06481 763 aa28.26■■■□□ 2.12
STRBP-201ENST00000348403 CC2D2AQ9P2K1 1620 aa28.23■■■□□ 2.11
STRBP-201ENST00000348403 CLIP1P30622 1438 aa28.21■■■□□ 2.11
STRBP-201ENST00000348403 HMGXB3Q12766 1538 aa28.18■■■□□ 2.1
STRBP-201ENST00000348403 CEP164Q9UPV0 1460 aa28.11■■■□□ 2.09
STRBP-201ENST00000348403 SUPT16HQ9Y5B9 1047 aaKnown RBP28.1■■■□□ 2.09
STRBP-201ENST00000348403 VPS8Q8N3P4 1428 aa28.09■■■□□ 2.09
STRBP-201ENST00000348403 SYNJ1O43426 1573 aa27.97■■■□□ 2.07
STRBP-201ENST00000348403 KIF21BO75037 1637 aa27.96■■■□□ 2.07
STRBP-201ENST00000348403 RAPGEF2Q9Y4G8 1499 aa27.96■■■□□ 2.07
STRBP-201ENST00000348403 DHX57Q6P158 1386 aaKnown RBP27.93■■■□□ 2.06
STRBP-201ENST00000348403 DNAJC5BQ9UF47 199 aa27.88■■■□□ 2.05
STRBP-201ENST00000348403 CLSPNQ9HAW4 1339 aa27.86■■■□□ 2.05
STRBP-201ENST00000348403 TSHZ2Q9NRE2 1034 aa27.86■■■□□ 2.05
STRBP-201ENST00000348403 KANK4Q5T7N3 995 aaPredicted RBP27.79■■■□□ 2.04
STRBP-201ENST00000348403 KCNH8Q96L42 1107 aa27.78■■■□□ 2.04
STRBP-201ENST00000348403 CFTRP13569 1480 aa27.76■■■□□ 2.03
STRBP-201ENST00000348403 ITGAEP38570 1179 aa27.75■■■□□ 2.03
STRBP-201ENST00000348403 BCANQ96GW7 911 aa27.75■■■□□ 2.03
STRBP-201ENST00000348403 CADPSQ9ULU8 1353 aa27.72■■■□□ 2.03
STRBP-201ENST00000348403 ANP32EQ9BTT0 268 aa27.67■■■□□ 2.02
STRBP-201ENST00000348403 NESP48681 1621 aa27.61■■■□□ 2.01
STRBP-201ENST00000348403 ARAP1Q96P48 1450 aa27.58■■■□□ 2.01
STRBP-201ENST00000348403 FKBP8Q14318 412 aa27.54■■■□□ 2
STRBP-201ENST00000348403 CUX1P39880 1505 aa27.49■■□□□ 1.99
STRBP-201ENST00000348403 TOP2BQ02880 1626 aa27.49■■□□□ 1.99
STRBP-201ENST00000348403 DDX10Q13206 875 aaKnown RBP27.48■■□□□ 1.99
STRBP-201ENST00000348403 RRBP1Q9P2E9 1410 aaKnown RBP27.48■■□□□ 1.99
STRBP-201ENST00000348403 CCNB3Q8WWL7 1395 aa27.47■■□□□ 1.99
STRBP-201ENST00000348403 FANCD2Q9BXW9 1451 aa27.44■■□□□ 1.98
STRBP-201ENST00000348403 PRDM2Q13029 1718 aa27.44■■□□□ 1.98
STRBP-201ENST00000348403 BCL11AQ9H165 835 aa27.41■■□□□ 1.98
STRBP-201ENST00000348403 PRXQ9BXM0 1461 aa27.4■■□□□ 1.98
STRBP-201ENST00000348403 RAB3GAP2Q9H2M9 1393 aa27.39■■□□□ 1.98
STRBP-201ENST00000348403 BIVM-ERCC5R4GMW8 1640 aa27.39■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms