RNA–Protein interactions for RNA: ENST00000234389.3

GRIN3B-201, Transcript of glutamate ionotropic receptor NMDA type subunit 3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GRIN3B, Length 3,281 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRIN3B-201ENST00000234389 NISCHQ9Y2I1 1504 aa36.4■■■■□ 3.42
GRIN3B-201ENST00000234389 SHROOM4Q9ULL8 1493 aa32.43■■■□□ 2.78
GRIN3B-201ENST00000234389 DCAF8L2P0C7V8 631 aa32.18■■■□□ 2.74
GRIN3B-201ENST00000234389 SUPT5HO00267 1087 aaKnown RBP31.8■■■□□ 2.68
GRIN3B-201ENST00000234389 ZCCHC6Q5VYS8 1495 aaKnown RBP30.58■■■□□ 2.49
GRIN3B-201ENST00000234389 CCDC180Q9P1Z9 1646 aa30.34■■■□□ 2.45
GRIN3B-201ENST00000234389 CHIC1Q5VXU3 224 aa30.09■■■□□ 2.41
GRIN3B-201ENST00000234389 EHMT2Q96KQ7 1210 aa29.95■■■□□ 2.39
GRIN3B-201ENST00000234389 PELP1Q8IZL8 1130 aaKnown RBP29.86■■■□□ 2.37
GRIN3B-201ENST00000234389 LOC105371045A0A1W2PR82 267 aa29.79■■■□□ 2.36
GRIN3B-201ENST00000234389 MYO15BQ96JP2 1530 aa29.79■■■□□ 2.36
GRIN3B-201ENST00000234389 ABCC9O60706 1549 aa29.75■■■□□ 2.35
GRIN3B-201ENST00000234389 HRCP23327 699 aa29.67■■■□□ 2.34
GRIN3B-201ENST00000234389 FAM9AQ8IZU1 332 aaPredicted RBP29.64■■■□□ 2.34
GRIN3B-201ENST00000234389 PCGF6Q9BYE7 350 aa29.6■■■□□ 2.33
GRIN3B-201ENST00000234389 PPARGC1BQ86YN6 1023 aaKnown RBP29.57■■■□□ 2.32
GRIN3B-201ENST00000234389 SCRIBQ14160 1630 aa29.51■■■□□ 2.31
GRIN3B-201ENST00000234389 TRIM41Q8WV44 630 aa29.21■■■□□ 2.27
GRIN3B-201ENST00000234389 DCAF1Q9Y4B6 1507 aa29.17■■■□□ 2.26
GRIN3B-201ENST00000234389 RSF1Q96T23 1441 aaPredicted RBP29.01■■■□□ 2.23
GRIN3B-201ENST00000234389 CECR2Q9BXF3 1484 aa28.91■■■□□ 2.22
GRIN3B-201ENST00000234389 PABPN1Q86U42 306 aaKnown RBP eCLIP28.89■■■□□ 2.22
GRIN3B-201ENST00000234389 MYT1Q01538 1121 aa28.86■■■□□ 2.21
GRIN3B-201ENST00000234389 TTBK1Q5TCY1 1321 aaPredicted RBP28.8■■■□□ 2.2
GRIN3B-201ENST00000234389 SCAF1Q9H7N4 1312 aaKnown RBP28.79■■■□□ 2.2
GRIN3B-201ENST00000234389 RB1CC1Q8TDY2 1594 aa28.7■■■□□ 2.19
GRIN3B-201ENST00000234389 MROH2BQ7Z745 1585 aa28.57■■■□□ 2.16
GRIN3B-201ENST00000234389 TRIM26Q12899 539 aaPredicted RBP28.44■■■□□ 2.14
GRIN3B-201ENST00000234389 NACADO15069 1562 aa28.44■■■□□ 2.14
GRIN3B-201ENST00000234389 WIZO95785 1651 aa28.39■■■□□ 2.14
GRIN3B-201ENST00000234389 RANGAP1P46060 587 aaPredicted RBP28.32■■■□□ 2.12
GRIN3B-201ENST00000234389 UBTFP17480 764 aaKnown RBP28.09■■■□□ 2.09
GRIN3B-201ENST00000234389 ABCC8Q09428 1581 aa28■■■□□ 2.07
GRIN3B-201ENST00000234389 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.97■■■□□ 2.07
GRIN3B-201ENST00000234389 BAZ1AQ9NRL2 1556 aaPredicted RBP27.9■■■□□ 2.06
GRIN3B-201ENST00000234389 CCDC88BA6NC98 1476 aa27.86■■■□□ 2.05
GRIN3B-201ENST00000234389 GTF3C3Q9Y5Q9 886 aa27.8■■■□□ 2.04
GRIN3B-201ENST00000234389 SOGA1O94964 1423 aa27.79■■■□□ 2.04
GRIN3B-201ENST00000234389 CCER1Q8TC90 406 aaPredicted RBP27.78■■■□□ 2.04
GRIN3B-201ENST00000234389 NEUROD1Q13562 356 aa27.75■■■□□ 2.03
GRIN3B-201ENST00000234389 ACIN1Q9UKV3 1341 aaKnown RBP27.7■■■□□ 2.02
GRIN3B-201ENST00000234389 SMARCA4P51532 1647 aa27.68■■■□□ 2.02
GRIN3B-201ENST00000234389 RUSC2Q8N2Y8 1516 aa27.68■■■□□ 2.02
GRIN3B-201ENST00000234389 CSRNP3Q8WYN3 585 aa27.66■■■□□ 2.02
GRIN3B-201ENST00000234389 UNC13AQ9UPW8 1703 aa27.61■■■□□ 2.01
GRIN3B-201ENST00000234389 TOP2AP11388 1531 aaKnown RBP27.57■■■□□ 2
GRIN3B-201ENST00000234389 SMARCA2P51531 1590 aa27.52■■■□□ 2
GRIN3B-201ENST00000234389 HNRNPUL2Q1KMD3 747 aaKnown RBP27.52■■■□□ 2
GRIN3B-201ENST00000234389 ZEB1P37275 1124 aaPredicted RBP27.46■■□□□ 1.99
GRIN3B-201ENST00000234389 BICRAQ9NZM4 1560 aa27.42■■□□□ 1.98
GRIN3B-201ENST00000234389 CEP162Q5TB80 1403 aa27.41■■□□□ 1.98
GRIN3B-201ENST00000234389 BCL11AQ9H165 835 aa27.4■■□□□ 1.98
GRIN3B-201ENST00000234389 WRNQ14191 1432 aaPredicted RBP eCLIP27.37■■□□□ 1.97
GRIN3B-201ENST00000234389 CENPBP07199 599 aaPredicted RBP27.33■■□□□ 1.97
GRIN3B-201ENST00000234389 APLP2Q06481 763 aa27.32■■□□□ 1.96
GRIN3B-201ENST00000234389 BAZ1BQ9UIG0 1483 aaKnown RBP27.31■■□□□ 1.96
GRIN3B-201ENST00000234389 ATAD2BQ9ULI0 1458 aa27.24■■□□□ 1.95
GRIN3B-201ENST00000234389 EIF4G1Q04637 1599 aaKnown RBP27.22■■□□□ 1.95
GRIN3B-201ENST00000234389 ITGAEP38570 1179 aa27.14■■□□□ 1.94
GRIN3B-201ENST00000234389 TNIKQ9UKE5 1360 aa27.13■■□□□ 1.93
GRIN3B-201ENST00000234389 YTHDC1Q96MU7 727 aaKnown RBP27.1■■□□□ 1.93
GRIN3B-201ENST00000234389 ATP1B4Q9UN42 357 aaPredicted RBP27.1■■□□□ 1.93
GRIN3B-201ENST00000234389 SYNJ1O43426 1573 aa27.05■■□□□ 1.92
GRIN3B-201ENST00000234389 GOLGA3Q08378 1498 aa27.02■■□□□ 1.92
GRIN3B-201ENST00000234389 CLIP1P30622 1438 aa27■■□□□ 1.91
GRIN3B-201ENST00000234389 RAPGEF2Q9Y4G8 1499 aa26.97■■□□□ 1.91
GRIN3B-201ENST00000234389 PRKCSHP14314 528 aaPredicted RBP26.96■■□□□ 1.91
GRIN3B-201ENST00000234389 P3H3Q8IVL6 736 aa26.96■■□□□ 1.91
GRIN3B-201ENST00000234389 DIEXFQ68CQ4 756 aaKnown RBP26.91■■□□□ 1.9
GRIN3B-201ENST00000234389 EEA1Q15075 1411 aa26.87■■□□□ 1.89
GRIN3B-201ENST00000234389 CEP164Q9UPV0 1460 aa26.83■■□□□ 1.89
GRIN3B-201ENST00000234389 KANK4Q5T7N3 995 aaPredicted RBP26.79■■□□□ 1.88
GRIN3B-201ENST00000234389 PEG3Q9GZU2 1588 aa26.67■■□□□ 1.86
GRIN3B-201ENST00000234389 ANP32EQ9BTT0 268 aa26.63■■□□□ 1.85
GRIN3B-201ENST00000234389 DNAJC5BQ9UF47 199 aa26.61■■□□□ 1.85
GRIN3B-201ENST00000234389 VPS8Q8N3P4 1428 aa26.6■■□□□ 1.85
GRIN3B-201ENST00000234389 ZNF316A6NFI3 1004 aaPredicted RBP26.55■■□□□ 1.84
GRIN3B-201ENST00000234389 FAM50AQ14320 339 aaKnown RBP26.52■■□□□ 1.84
GRIN3B-201ENST00000234389 KIF27Q86VH2 1401 aa26.51■■□□□ 1.83
GRIN3B-201ENST00000234389 NCAPD3P42695 1498 aa26.51■■□□□ 1.83
GRIN3B-201ENST00000234389 CUX1P39880 1505 aa26.51■■□□□ 1.83
GRIN3B-201ENST00000234389 CUX2O14529 1486 aa26.5■■□□□ 1.83
GRIN3B-201ENST00000234389 ARID3CA6NKF2 412 aa26.48■■□□□ 1.83
GRIN3B-201ENST00000234389 KIF21BO75037 1637 aa26.46■■□□□ 1.83
GRIN3B-201ENST00000234389 TOP2BQ02880 1626 aa26.43■■□□□ 1.82
GRIN3B-201ENST00000234389 MIER1Q8N108 512 aa26.43■■□□□ 1.82
GRIN3B-201ENST00000234389 ARAP1Q96P48 1450 aa26.37■■□□□ 1.81
GRIN3B-201ENST00000234389 CADPSQ9ULU8 1353 aa26.35■■□□□ 1.81
GRIN3B-201ENST00000234389 CFTRP13569 1480 aa26.34■■□□□ 1.81
GRIN3B-201ENST00000234389 NESP48681 1621 aa26.33■■□□□ 1.81
GRIN3B-201ENST00000234389 CARMIL1Q5VZK9 1371 aa26.31■■□□□ 1.8
GRIN3B-201ENST00000234389 IGF1RP08069 1367 aa26.29■■□□□ 1.8
GRIN3B-201ENST00000234389 PRXQ9BXM0 1461 aa26.29■■□□□ 1.8
GRIN3B-201ENST00000234389 RAD54L2Q9Y4B4 1467 aa26.27■■□□□ 1.8
GRIN3B-201ENST00000234389 HIRIP3Q9BW71 556 aaPredicted RBP26.24■■□□□ 1.79
GRIN3B-201ENST00000234389 FGD5Q6ZNL6 1462 aa26.23■■□□□ 1.79
GRIN3B-201ENST00000234389 HMGXB3Q12766 1538 aa26.23■■□□□ 1.79
GRIN3B-201ENST00000234389 TDRD9Q8NDG6 1382 aaKnown RBP26.2■■□□□ 1.78
GRIN3B-201ENST00000234389 CC2D2AQ9P2K1 1620 aa26.2■■□□□ 1.78
GRIN3B-201ENST00000234389 ARHGAP35Q9NRY4 1499 aa26.16■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms