RNA–Protein interactions for RNA: ENST00000389623.10

SSC5D-201, Transcript of scavenger receptor cysteine rich family member with 5 domains, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSC5D, Length 4,845 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSC5D-201ENST00000389623 DCAF8L2P0C7V8 631 aa30.93■■■□□ 2.54
SSC5D-201ENST00000389623 NISCHQ9Y2I1 1504 aa30.41■■■□□ 2.46
SSC5D-201ENST00000389623 SUPT5HO00267 1087 aaKnown RBP30.31■■■□□ 2.44
SSC5D-201ENST00000389623 SHROOM4Q9ULL8 1493 aa29.64■■■□□ 2.33
SSC5D-201ENST00000389623 EHMT2Q96KQ7 1210 aa29.03■■■□□ 2.24
SSC5D-201ENST00000389623 PCGF6Q9BYE7 350 aa29.02■■■□□ 2.24
SSC5D-201ENST00000389623 PELP1Q8IZL8 1130 aaKnown RBP28.96■■■□□ 2.23
SSC5D-201ENST00000389623 FAM9AQ8IZU1 332 aaPredicted RBP28.5■■■□□ 2.15
SSC5D-201ENST00000389623 ZEB1P37275 1124 aaPredicted RBP28.48■■■□□ 2.15
SSC5D-201ENST00000389623 CENPBP07199 599 aaPredicted RBP28.39■■■□□ 2.14
SSC5D-201ENST00000389623 APLP2Q06481 763 aa28.39■■■□□ 2.14
SSC5D-201ENST00000389623 TTBK1Q5TCY1 1321 aaPredicted RBP28.18■■■□□ 2.1
SSC5D-201ENST00000389623 CCER1Q8TC90 406 aaPredicted RBP28.12■■■□□ 2.09
SSC5D-201ENST00000389623 TRIM41Q8WV44 630 aa28.03■■■□□ 2.08
SSC5D-201ENST00000389623 HRCP23327 699 aa28.03■■■□□ 2.08
SSC5D-201ENST00000389623 MYT1Q01538 1121 aa27.96■■■□□ 2.07
SSC5D-201ENST00000389623 TRIM26Q12899 539 aaPredicted RBP27.77■■■□□ 2.04
SSC5D-201ENST00000389623 ERICH6Q7L0X2 663 aa27.7■■■□□ 2.03
SSC5D-201ENST00000389623 YTHDC1Q96MU7 727 aaKnown RBP27.64■■■□□ 2.01
SSC5D-201ENST00000389623 RANGAP1P46060 587 aaPredicted RBP27.53■■■□□ 2
SSC5D-201ENST00000389623 UBTFP17480 764 aaKnown RBP27.5■■□□□ 1.99
SSC5D-201ENST00000389623 CHIC1Q5VXU3 224 aa27.47■■□□□ 1.99
SSC5D-201ENST00000389623 PPARGC1BQ86YN6 1023 aaKnown RBP27.46■■□□□ 1.99
SSC5D-201ENST00000389623 NEFLP07196 543 aa27.42■■□□□ 1.98
SSC5D-201ENST00000389623 LOC105371045A0A1W2PR82 267 aa27.37■■□□□ 1.97
SSC5D-201ENST00000389623 ATP1B4Q9UN42 357 aaPredicted RBP27.11■■□□□ 1.93
SSC5D-201ENST00000389623 DIEXFQ68CQ4 756 aaKnown RBP26.88■■□□□ 1.89
SSC5D-201ENST00000389623 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.84■■□□□ 1.89
SSC5D-201ENST00000389623 HNRNPUL2Q1KMD3 747 aaKnown RBP26.81■■□□□ 1.88
SSC5D-201ENST00000389623 ITGAEP38570 1179 aa26.66■■□□□ 1.86
SSC5D-201ENST00000389623 GTF3C3Q9Y5Q9 886 aa26.61■■□□□ 1.85
SSC5D-201ENST00000389623 DAXXQ9UER7 740 aaPredicted RBP26.37■■□□□ 1.81
SSC5D-201ENST00000389623 ACIN1Q9UKV3 1341 aaKnown RBP26.34■■□□□ 1.81
SSC5D-201ENST00000389623 POLR3GLQ9BT43 218 aa26.29■■□□□ 1.8
SSC5D-201ENST00000389623 ZNF316A6NFI3 1004 aaPredicted RBP26.22■■□□□ 1.79
SSC5D-201ENST00000389623 RTL5Q5HYW3 569 aaPredicted RBP26.16■■□□□ 1.78
SSC5D-201ENST00000389623 CNGB1Q14028 1251 aaPredicted RBP26.14■■□□□ 1.78
SSC5D-201ENST00000389623 BCANQ96GW7 911 aa26.13■■□□□ 1.77
SSC5D-201ENST00000389623 FAM50AQ14320 339 aaKnown RBP25.94■■□□□ 1.74
SSC5D-201ENST00000389623 NEUROD1Q13562 356 aa25.93■■□□□ 1.74
SSC5D-201ENST00000389623 DCAF1Q9Y4B6 1507 aa25.92■■□□□ 1.74
SSC5D-201ENST00000389623 ANP32CO43423 234 aa25.9■■□□□ 1.74
SSC5D-201ENST00000389623 CDK11AQ9UQ88 783 aaPredicted RBP25.89■■□□□ 1.73
SSC5D-201ENST00000389623 CLSPNQ9HAW4 1339 aa25.76■■□□□ 1.71
SSC5D-201ENST00000389623 SCAF1Q9H7N4 1312 aaKnown RBP25.75■■□□□ 1.71
SSC5D-201ENST00000389623 TRIM52Q96A61 297 aa25.7■■□□□ 1.7
SSC5D-201ENST00000389623 CSRNP3Q8WYN3 585 aa25.68■■□□□ 1.7
SSC5D-201ENST00000389623 MYT1LQ9UL68 1186 aa25.6■■□□□ 1.69
SSC5D-201ENST00000389623 FKBP8Q14318 412 aa25.52■■□□□ 1.68
SSC5D-201ENST00000389623 ANP32AP39687 249 aaKnown RBP25.43■■□□□ 1.66
SSC5D-201ENST00000389623 SLC4A1APQ9BWU0 796 aaKnown RBP25.42■■□□□ 1.66
SSC5D-201ENST00000389623 ZNF326Q5BKZ1 582 aaKnown RBP25.42■■□□□ 1.66
SSC5D-201ENST00000389623 PABPN1Q86U42 306 aaKnown RBP eCLIP25.4■■□□□ 1.66
SSC5D-201ENST00000389623 ABCC9O60706 1549 aa25.35■■□□□ 1.65
SSC5D-201ENST00000389623 MYO15BQ96JP2 1530 aa25.34■■□□□ 1.65
SSC5D-201ENST00000389623 MIER1Q8N108 512 aa25.34■■□□□ 1.65
SSC5D-201ENST00000389623 DDX10Q13206 875 aaKnown RBP25.3■■□□□ 1.64
SSC5D-201ENST00000389623 ZCCHC6Q5VYS8 1495 aaKnown RBP25.29■■□□□ 1.64
SSC5D-201ENST00000389623 HNRNPUQ00839 825 aaKnown RBP eCLIP25.26■■□□□ 1.63
SSC5D-201ENST00000389623 P3H3Q8IVL6 736 aa25.19■■□□□ 1.62
SSC5D-201ENST00000389623 NPM2Q86SE8 214 aaKnown RBP25.19■■□□□ 1.62
SSC5D-201ENST00000389623 TONSLQ96HA7 1378 aa25.16■■□□□ 1.62
SSC5D-201ENST00000389623 CANXP27824 592 aaKnown RBP25.06■■□□□ 1.6
SSC5D-201ENST00000389623 FAM9BQ8IZU0 186 aa25.05■■□□□ 1.6
SSC5D-201ENST00000389623 EIF5BO60841 1220 aaKnown RBP25.03■■□□□ 1.6
SSC5D-201ENST00000389623 CCDC180Q9P1Z9 1646 aa24.99■■□□□ 1.59
SSC5D-201ENST00000389623 ZBTB47Q9UFB7 747 aaPredicted RBP24.98■■□□□ 1.59
SSC5D-201ENST00000389623 CCDC136Q96JN2 1154 aa24.97■■□□□ 1.59
SSC5D-201ENST00000389623 NBR1Q14596 966 aa24.95■■□□□ 1.59
SSC5D-201ENST00000389623 ARID3CA6NKF2 412 aa24.9■■□□□ 1.58
SSC5D-201ENST00000389623 ANP32EQ9BTT0 268 aa24.9■■□□□ 1.58
SSC5D-201ENST00000389623 SCRIBQ14160 1630 aa24.88■■□□□ 1.57
SSC5D-201ENST00000389623 IRX6P78412 446 aaPredicted RBP24.86■■□□□ 1.57
SSC5D-201ENST00000389623 MRS2Q9HD23 443 aa24.85■■□□□ 1.57
SSC5D-201ENST00000389623 CLIP1P30622 1438 aa24.83■■□□□ 1.57
SSC5D-201ENST00000389623 HIRIP3Q9BW71 556 aaPredicted RBP24.81■■□□□ 1.56
SSC5D-201ENST00000389623 TMC1Q8TDI8 760 aa24.81■■□□□ 1.56
SSC5D-201ENST00000389623 ZNF777Q9ULD5 760 aaPredicted RBP24.78■■□□□ 1.56
SSC5D-201ENST00000389623 CEP162Q5TB80 1403 aa24.78■■□□□ 1.56
SSC5D-201ENST00000389623 BCL11AQ9H165 835 aa24.78■■□□□ 1.56
SSC5D-201ENST00000389623 SALL2Q9Y467 1007 aaPredicted RBP24.78■■□□□ 1.56
SSC5D-201ENST00000389623 UPF2Q9HAU5 1272 aaKnown RBP24.73■■□□□ 1.55
SSC5D-201ENST00000389623 FBLN2P98095 1184 aa24.72■■□□□ 1.55
SSC5D-201ENST00000389623 NEFMP07197 916 aa24.71■■□□□ 1.55
SSC5D-201ENST00000389623 ANP32BQ92688 251 aaKnown RBP24.68■■□□□ 1.54
SSC5D-201ENST00000389623 RSF1Q96T23 1441 aaPredicted RBP24.68■■□□□ 1.54
SSC5D-201ENST00000389623 CHIC2Q9UKJ5 165 aa24.68■■□□□ 1.54
SSC5D-201ENST00000389623 EEA1Q15075 1411 aa24.67■■□□□ 1.54
SSC5D-201ENST00000389623 SUPT16HQ9Y5B9 1047 aaKnown RBP24.65■■□□□ 1.54
SSC5D-201ENST00000389623 EIF4G2P78344 907 aaKnown RBP eCLIP24.64■■□□□ 1.53
SSC5D-201ENST00000389623 HSP90AA1P07900 732 aaKnown RBP24.63■■□□□ 1.53
SSC5D-201ENST00000389623 GLIPR1L2Q4G1C9 344 aa24.62■■□□□ 1.53
SSC5D-201ENST00000389623 GOLGA3Q08378 1498 aa24.61■■□□□ 1.53
SSC5D-201ENST00000389623 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.6■■□□□ 1.53
SSC5D-201ENST00000389623 TNIKQ9UKE5 1360 aa24.58■■□□□ 1.53
SSC5D-201ENST00000389623 MTUS2Q5JR59 1369 aa24.54■■□□□ 1.52
SSC5D-201ENST00000389623 ARXQ96QS3 562 aa24.46■■□□□ 1.51
SSC5D-201ENST00000389623 WDR43Q15061 677 aaKnown RBP eCLIP24.46■■□□□ 1.51
SSC5D-201ENST00000389623 SLC24A1O60721 1099 aa24.43■■□□□ 1.5
SSC5D-201ENST00000389623 DDRGK1Q96HY6 314 aa24.43■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms