RNA–Protein interactions for RNA: ENST00000377561.6

CNTNAP3B-203, Transcript of contactin associated protein like 3B, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CNTNAP3B, Length 5,379 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-203ENST00000377561 NISCHQ9Y2I1 1504 aa32.67■■■□□ 2.82
CNTNAP3B-203ENST00000377561 DCAF8L2P0C7V8 631 aa32.4■■■□□ 2.78
CNTNAP3B-203ENST00000377561 SUPT5HO00267 1087 aaKnown RBP31.2■■■□□ 2.59
CNTNAP3B-203ENST00000377561 SHROOM4Q9ULL8 1493 aa30.84■■■□□ 2.53
CNTNAP3B-203ENST00000377561 EHMT2Q96KQ7 1210 aa29.73■■■□□ 2.35
CNTNAP3B-203ENST00000377561 FAM9AQ8IZU1 332 aaPredicted RBP29.28■■■□□ 2.28
CNTNAP3B-203ENST00000377561 APLP2Q06481 763 aa29.21■■■□□ 2.27
CNTNAP3B-203ENST00000377561 PCGF6Q9BYE7 350 aa29.19■■■□□ 2.26
CNTNAP3B-203ENST00000377561 PELP1Q8IZL8 1130 aaKnown RBP29.17■■■□□ 2.26
CNTNAP3B-203ENST00000377561 TRIM41Q8WV44 630 aa29■■■□□ 2.23
CNTNAP3B-203ENST00000377561 TTBK1Q5TCY1 1321 aaPredicted RBP28.77■■■□□ 2.2
CNTNAP3B-203ENST00000377561 ZEB1P37275 1124 aaPredicted RBP28.73■■■□□ 2.19
CNTNAP3B-203ENST00000377561 CCER1Q8TC90 406 aaPredicted RBP28.48■■■□□ 2.15
CNTNAP3B-203ENST00000377561 RANGAP1P46060 587 aaPredicted RBP28.45■■■□□ 2.15
CNTNAP3B-203ENST00000377561 UBTFP17480 764 aaKnown RBP28.43■■■□□ 2.14
CNTNAP3B-203ENST00000377561 CENPBP07199 599 aaPredicted RBP28.28■■■□□ 2.12
CNTNAP3B-203ENST00000377561 CHIC1Q5VXU3 224 aa28.25■■■□□ 2.11
CNTNAP3B-203ENST00000377561 TRIM26Q12899 539 aaPredicted RBP28.19■■■□□ 2.1
CNTNAP3B-203ENST00000377561 ATP1B4Q9UN42 357 aaPredicted RBP28.1■■■□□ 2.09
CNTNAP3B-203ENST00000377561 PPARGC1BQ86YN6 1023 aaKnown RBP28.01■■■□□ 2.07
CNTNAP3B-203ENST00000377561 LOC105371045A0A1W2PR82 267 aa28■■■□□ 2.07
CNTNAP3B-203ENST00000377561 HRCP23327 699 aa28■■■□□ 2.07
CNTNAP3B-203ENST00000377561 ERICH6Q7L0X2 663 aa27.96■■■□□ 2.07
CNTNAP3B-203ENST00000377561 MYT1Q01538 1121 aa27.74■■■□□ 2.03
CNTNAP3B-203ENST00000377561 YTHDC1Q96MU7 727 aaKnown RBP27.63■■■□□ 2.01
CNTNAP3B-203ENST00000377561 ABCC9O60706 1549 aa27.52■■■□□ 2
CNTNAP3B-203ENST00000377561 NEFLP07196 543 aa27.49■■□□□ 1.99
CNTNAP3B-203ENST00000377561 HNRNPUL2Q1KMD3 747 aaKnown RBP27.4■■□□□ 1.98
CNTNAP3B-203ENST00000377561 ITGAEP38570 1179 aa27.38■■□□□ 1.97
CNTNAP3B-203ENST00000377561 PABPN1Q86U42 306 aaKnown RBP eCLIP27.22■■□□□ 1.95
CNTNAP3B-203ENST00000377561 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.22■■□□□ 1.95
CNTNAP3B-203ENST00000377561 ZCCHC6Q5VYS8 1495 aaKnown RBP27.16■■□□□ 1.94
CNTNAP3B-203ENST00000377561 DIEXFQ68CQ4 756 aaKnown RBP27.01■■□□□ 1.91
CNTNAP3B-203ENST00000377561 MYT1LQ9UL68 1186 aa26.99■■□□□ 1.91
CNTNAP3B-203ENST00000377561 CCDC180Q9P1Z9 1646 aa26.88■■□□□ 1.89
CNTNAP3B-203ENST00000377561 POLR3GLQ9BT43 218 aa26.86■■□□□ 1.89
CNTNAP3B-203ENST00000377561 DAXXQ9UER7 740 aaPredicted RBP26.83■■□□□ 1.88
CNTNAP3B-203ENST00000377561 FAM50AQ14320 339 aaKnown RBP26.82■■□□□ 1.88
CNTNAP3B-203ENST00000377561 SCRIBQ14160 1630 aa26.79■■□□□ 1.88
CNTNAP3B-203ENST00000377561 CSRNP3Q8WYN3 585 aa26.76■■□□□ 1.87
CNTNAP3B-203ENST00000377561 DCAF1Q9Y4B6 1507 aa26.61■■□□□ 1.85
CNTNAP3B-203ENST00000377561 NEUROD1Q13562 356 aa26.56■■□□□ 1.84
CNTNAP3B-203ENST00000377561 CNGB1Q14028 1251 aaPredicted RBP26.55■■□□□ 1.84
CNTNAP3B-203ENST00000377561 TRIM52Q96A61 297 aa26.55■■□□□ 1.84
CNTNAP3B-203ENST00000377561 ZNF316A6NFI3 1004 aaPredicted RBP26.52■■□□□ 1.84
CNTNAP3B-203ENST00000377561 SLC4A1APQ9BWU0 796 aaKnown RBP26.44■■□□□ 1.82
CNTNAP3B-203ENST00000377561 GTF3C3Q9Y5Q9 886 aa26.37■■□□□ 1.81
CNTNAP3B-203ENST00000377561 ANP32CO43423 234 aa26.32■■□□□ 1.8
CNTNAP3B-203ENST00000377561 P3H3Q8IVL6 736 aa26.3■■□□□ 1.8
CNTNAP3B-203ENST00000377561 CLSPNQ9HAW4 1339 aa26.22■■□□□ 1.79
CNTNAP3B-203ENST00000377561 RSF1Q96T23 1441 aaPredicted RBP26.18■■□□□ 1.78
CNTNAP3B-203ENST00000377561 ACIN1Q9UKV3 1341 aaKnown RBP26.18■■□□□ 1.78
CNTNAP3B-203ENST00000377561 FBLN2P98095 1184 aa26.17■■□□□ 1.78
CNTNAP3B-203ENST00000377561 MYO15BQ96JP2 1530 aa26.15■■□□□ 1.78
CNTNAP3B-203ENST00000377561 ZNF326Q5BKZ1 582 aaKnown RBP26.13■■□□□ 1.77
CNTNAP3B-203ENST00000377561 RTL5Q5HYW3 569 aaPredicted RBP26.09■■□□□ 1.77
CNTNAP3B-203ENST00000377561 RB1CC1Q8TDY2 1594 aa26.08■■□□□ 1.77
CNTNAP3B-203ENST00000377561 BCANQ96GW7 911 aa26.07■■□□□ 1.76
CNTNAP3B-203ENST00000377561 ARID3CA6NKF2 412 aa26.01■■□□□ 1.76
CNTNAP3B-203ENST00000377561 NACADO15069 1562 aa25.98■■□□□ 1.75
CNTNAP3B-203ENST00000377561 CDK11AQ9UQ88 783 aaPredicted RBP25.98■■□□□ 1.75
CNTNAP3B-203ENST00000377561 EEA1Q15075 1411 aa25.93■■□□□ 1.74
CNTNAP3B-203ENST00000377561 CLIP1P30622 1438 aa25.9■■□□□ 1.74
CNTNAP3B-203ENST00000377561 TONSLQ96HA7 1378 aa25.87■■□□□ 1.73
CNTNAP3B-203ENST00000377561 ZNF777Q9ULD5 760 aaPredicted RBP25.87■■□□□ 1.73
CNTNAP3B-203ENST00000377561 GOLGA3Q08378 1498 aa25.82■■□□□ 1.72
CNTNAP3B-203ENST00000377561 CEP162Q5TB80 1403 aa25.8■■□□□ 1.72
CNTNAP3B-203ENST00000377561 ZBTB47Q9UFB7 747 aaPredicted RBP25.78■■□□□ 1.72
CNTNAP3B-203ENST00000377561 WRNQ14191 1432 aaPredicted RBP eCLIP25.74■■□□□ 1.71
CNTNAP3B-203ENST00000377561 DDX10Q13206 875 aaKnown RBP25.69■■□□□ 1.7
CNTNAP3B-203ENST00000377561 TNIKQ9UKE5 1360 aa25.67■■□□□ 1.7
CNTNAP3B-203ENST00000377561 BAZ1AQ9NRL2 1556 aaPredicted RBP25.65■■□□□ 1.7
CNTNAP3B-203ENST00000377561 BAZ1BQ9UIG0 1483 aaKnown RBP25.63■■□□□ 1.69
CNTNAP3B-203ENST00000377561 MTUS2Q5JR59 1369 aa25.63■■□□□ 1.69
CNTNAP3B-203ENST00000377561 CHIC2Q9UKJ5 165 aa25.6■■□□□ 1.69
CNTNAP3B-203ENST00000377561 SLC24A1O60721 1099 aa25.58■■□□□ 1.69
CNTNAP3B-203ENST00000377561 CEP164Q9UPV0 1460 aa25.58■■□□□ 1.69
CNTNAP3B-203ENST00000377561 SCAF1Q9H7N4 1312 aaKnown RBP25.57■■□□□ 1.68
CNTNAP3B-203ENST00000377561 CECR2Q9BXF3 1484 aa25.57■■□□□ 1.68
CNTNAP3B-203ENST00000377561 FKBP8Q14318 412 aa25.56■■□□□ 1.68
CNTNAP3B-203ENST00000377561 CANXP27824 592 aaKnown RBP25.56■■□□□ 1.68
CNTNAP3B-203ENST00000377561 NEFMP07197 916 aa25.54■■□□□ 1.68
CNTNAP3B-203ENST00000377561 HNRNPUQ00839 825 aaKnown RBP eCLIP25.54■■□□□ 1.68
CNTNAP3B-203ENST00000377561 MIER1Q8N108 512 aa25.51■■□□□ 1.67
CNTNAP3B-203ENST00000377561 KIF27Q86VH2 1401 aa25.49■■□□□ 1.67
CNTNAP3B-203ENST00000377561 BCL11AQ9H165 835 aa25.48■■□□□ 1.67
CNTNAP3B-203ENST00000377561 FAM9BQ8IZU0 186 aa25.43■■□□□ 1.66
CNTNAP3B-203ENST00000377561 ANP32AP39687 249 aaKnown RBP25.4■■□□□ 1.66
CNTNAP3B-203ENST00000377561 TSPY4P0CV99 314 aa25.39■■□□□ 1.66
CNTNAP3B-203ENST00000377561 TSPY10P0CW01 314 aa25.39■■□□□ 1.66
CNTNAP3B-203ENST00000377561 CHMP7Q8WUX9 453 aaPredicted RBP25.36■■□□□ 1.65
CNTNAP3B-203ENST00000377561 RRP7BPQ9NSQ0 103 aa25.31■■□□□ 1.64
CNTNAP3B-203ENST00000377561 MROH2BQ7Z745 1585 aa25.3■■□□□ 1.64
CNTNAP3B-203ENST00000377561 TMC1Q8TDI8 760 aa25.29■■□□□ 1.64
CNTNAP3B-203ENST00000377561 EIF4G2P78344 907 aaKnown RBP eCLIP25.28■■□□□ 1.64
CNTNAP3B-203ENST00000377561 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.28■■□□□ 1.644e-8■□□□□ 10.5
CNTNAP3B-203ENST00000377561 HIRIP3Q9BW71 556 aaPredicted RBP25.27■■□□□ 1.64
CNTNAP3B-203ENST00000377561 MRS2Q9HD23 443 aa25.27■■□□□ 1.64
CNTNAP3B-203ENST00000377561 SOGA1O94964 1423 aa25.27■■□□□ 1.64
CNTNAP3B-203ENST00000377561 CHGAP10645 457 aaKnown RBP25.27■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms