Protein–RNA interactions for Protein: A0A0B4J1X8

IGHV3-43, Immunoglobulin heavy variable 3-43, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-43A0A0B4J1X8 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
IGHV3-43A0A0B4J1X8 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
IGHV3-43A0A0B4J1X8 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
IGHV3-43A0A0B4J1X8 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
IGHV3-43A0A0B4J1X8 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC19.64■□□□□ 0.73
IGHV3-43A0A0B4J1X8 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
IGHV3-43A0A0B4J1X8 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
IGHV3-43A0A0B4J1X8 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
IGHV3-43A0A0B4J1X8 PKM-204ENST00000449901 2526 ntTSL 2 BASIC19.63■□□□□ 0.73
IGHV3-43A0A0B4J1X8 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
IGHV3-43A0A0B4J1X8 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
IGHV3-43A0A0B4J1X8 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC19.63■□□□□ 0.73
IGHV3-43A0A0B4J1X8 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC19.63■□□□□ 0.73
IGHV3-43A0A0B4J1X8 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
IGHV3-43A0A0B4J1X8 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
IGHV3-43A0A0B4J1X8 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
IGHV3-43A0A0B4J1X8 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC19.62■□□□□ 0.73
IGHV3-43A0A0B4J1X8 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC19.62■□□□□ 0.73
IGHV3-43A0A0B4J1X8 AC026202.3-201ENST00000600805 1127 ntBASIC19.62■□□□□ 0.73
IGHV3-43A0A0B4J1X8 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
IGHV3-43A0A0B4J1X8 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
IGHV3-43A0A0B4J1X8 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
IGHV3-43A0A0B4J1X8 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
IGHV3-43A0A0B4J1X8 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
IGHV3-43A0A0B4J1X8 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
IGHV3-43A0A0B4J1X8 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
IGHV3-43A0A0B4J1X8 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
IGHV3-43A0A0B4J1X8 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
IGHV3-43A0A0B4J1X8 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
IGHV3-43A0A0B4J1X8 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
IGHV3-43A0A0B4J1X8 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
IGHV3-43A0A0B4J1X8 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC19.61■□□□□ 0.73
IGHV3-43A0A0B4J1X8 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC19.61■□□□□ 0.73
IGHV3-43A0A0B4J1X8 SLC6A10P-202ENST00000431994 2058 ntBASIC19.61■□□□□ 0.73
IGHV3-43A0A0B4J1X8 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
IGHV3-43A0A0B4J1X8 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
IGHV3-43A0A0B4J1X8 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
IGHV3-43A0A0B4J1X8 GFER-205ENST00000569451 517 ntTSL 5 BASIC19.6■□□□□ 0.73
IGHV3-43A0A0B4J1X8 RAP2CP1-202ENST00000605179 643 ntBASIC19.6■□□□□ 0.73
IGHV3-43A0A0B4J1X8 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
IGHV3-43A0A0B4J1X8 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
IGHV3-43A0A0B4J1X8 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
IGHV3-43A0A0B4J1X8 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC19.6■□□□□ 0.73
IGHV3-43A0A0B4J1X8 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
IGHV3-43A0A0B4J1X8 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
IGHV3-43A0A0B4J1X8 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
IGHV3-43A0A0B4J1X8 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
IGHV3-43A0A0B4J1X8 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
IGHV3-43A0A0B4J1X8 RNF126P1-201ENST00000567452 1320 ntBASIC19.59■□□□□ 0.73
IGHV3-43A0A0B4J1X8 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC19.59■□□□□ 0.73
IGHV3-43A0A0B4J1X8 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
IGHV3-43A0A0B4J1X8 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
IGHV3-43A0A0B4J1X8 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
IGHV3-43A0A0B4J1X8 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
IGHV3-43A0A0B4J1X8 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC19.59■□□□□ 0.73
IGHV3-43A0A0B4J1X8 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
IGHV3-43A0A0B4J1X8 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
IGHV3-43A0A0B4J1X8 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
IGHV3-43A0A0B4J1X8 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
IGHV3-43A0A0B4J1X8 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
IGHV3-43A0A0B4J1X8 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
IGHV3-43A0A0B4J1X8 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC19.57■□□□□ 0.72
IGHV3-43A0A0B4J1X8 AC009831.1-201ENST00000580420 1582 ntBASIC19.57■□□□□ 0.72
IGHV3-43A0A0B4J1X8 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
IGHV3-43A0A0B4J1X8 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
IGHV3-43A0A0B4J1X8 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
IGHV3-43A0A0B4J1X8 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
IGHV3-43A0A0B4J1X8 AC133552.2-201ENST00000619106 1032 ntBASIC19.57■□□□□ 0.72
IGHV3-43A0A0B4J1X8 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
IGHV3-43A0A0B4J1X8 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
IGHV3-43A0A0B4J1X8 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
IGHV3-43A0A0B4J1X8 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
IGHV3-43A0A0B4J1X8 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
IGHV3-43A0A0B4J1X8 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
IGHV3-43A0A0B4J1X8 HES4-204ENST00000484667 667 ntTSL 3 BASIC19.56■□□□□ 0.72
IGHV3-43A0A0B4J1X8 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
IGHV3-43A0A0B4J1X8 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
IGHV3-43A0A0B4J1X8 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
IGHV3-43A0A0B4J1X8 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
IGHV3-43A0A0B4J1X8 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
IGHV3-43A0A0B4J1X8 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
IGHV3-43A0A0B4J1X8 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
IGHV3-43A0A0B4J1X8 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
IGHV3-43A0A0B4J1X8 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
IGHV3-43A0A0B4J1X8 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
IGHV3-43A0A0B4J1X8 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
IGHV3-43A0A0B4J1X8 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
IGHV3-43A0A0B4J1X8 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
IGHV3-43A0A0B4J1X8 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
IGHV3-43A0A0B4J1X8 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
IGHV3-43A0A0B4J1X8 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
IGHV3-43A0A0B4J1X8 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
IGHV3-43A0A0B4J1X8 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
IGHV3-43A0A0B4J1X8 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
IGHV3-43A0A0B4J1X8 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
IGHV3-43A0A0B4J1X8 AC093323.1-202ENST00000635031 2045 ntBASIC19.54■□□□□ 0.72
IGHV3-43A0A0B4J1X8 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
IGHV3-43A0A0B4J1X8 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
IGHV3-43A0A0B4J1X8 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
IGHV3-43A0A0B4J1X8 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 11.5 ms