Protein–RNA interactions for Protein: Q9UQ90

SPG7, Paraplegin, humanhuman

Predictions only

Length 795 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7Q9UQ90 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC31.62■■■□□ 2.65
SPG7Q9UQ90 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC31.61■■■□□ 2.65
SPG7Q9UQ90 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC31.61■■■□□ 2.65
SPG7Q9UQ90 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC31.61■■■□□ 2.65
SPG7Q9UQ90 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC31.61■■■□□ 2.65
SPG7Q9UQ90 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC31.61■■■□□ 2.65
SPG7Q9UQ90 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC31.6■■■□□ 2.65
SPG7Q9UQ90 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC31.6■■■□□ 2.65
SPG7Q9UQ90 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
SPG7Q9UQ90 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC31.6■■■□□ 2.65
SPG7Q9UQ90 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC31.6■■■□□ 2.65
SPG7Q9UQ90 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
SPG7Q9UQ90 AC008406.3-201ENST00000620001 1374 ntBASIC31.59■■■□□ 2.65
SPG7Q9UQ90 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
SPG7Q9UQ90 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
SPG7Q9UQ90 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC31.59■■■□□ 2.65
SPG7Q9UQ90 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC31.59■■■□□ 2.65
SPG7Q9UQ90 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC31.59■■■□□ 2.65
SPG7Q9UQ90 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
SPG7Q9UQ90 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
SPG7Q9UQ90 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
SPG7Q9UQ90 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
SPG7Q9UQ90 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC31.58■■■□□ 2.65
SPG7Q9UQ90 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC31.57■■■□□ 2.65
SPG7Q9UQ90 AC021242.3-201ENST00000607598 1377 ntBASIC31.57■■■□□ 2.64
SPG7Q9UQ90 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC31.57■■■□□ 2.64
SPG7Q9UQ90 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
SPG7Q9UQ90 KRT16P3-201ENST00000439127 1283 ntBASIC31.57■■■□□ 2.64
SPG7Q9UQ90 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC31.57■■■□□ 2.64
SPG7Q9UQ90 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC31.57■■■□□ 2.64
SPG7Q9UQ90 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC31.57■■■□□ 2.64
SPG7Q9UQ90 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
SPG7Q9UQ90 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
SPG7Q9UQ90 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
SPG7Q9UQ90 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
SPG7Q9UQ90 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC31.55■■■□□ 2.64
SPG7Q9UQ90 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC31.55■■■□□ 2.64
SPG7Q9UQ90 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
SPG7Q9UQ90 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC31.55■■■□□ 2.64
SPG7Q9UQ90 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC31.55■■■□□ 2.64
SPG7Q9UQ90 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC31.54■■■□□ 2.64
SPG7Q9UQ90 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
SPG7Q9UQ90 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC31.54■■■□□ 2.64
SPG7Q9UQ90 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC31.53■■■□□ 2.64
SPG7Q9UQ90 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC31.53■■■□□ 2.64
SPG7Q9UQ90 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC31.53■■■□□ 2.64
SPG7Q9UQ90 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
SPG7Q9UQ90 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
SPG7Q9UQ90 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC31.52■■■□□ 2.64
SPG7Q9UQ90 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC31.52■■■□□ 2.64
SPG7Q9UQ90 LSM7-203ENST00000585409 512 ntTSL 2 BASIC31.52■■■□□ 2.64
SPG7Q9UQ90 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC31.52■■■□□ 2.64
SPG7Q9UQ90 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC31.52■■■□□ 2.64
SPG7Q9UQ90 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC31.51■■■□□ 2.64
SPG7Q9UQ90 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC31.51■■■□□ 2.63
SPG7Q9UQ90 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC31.5■■■□□ 2.63
SPG7Q9UQ90 TSPY9P-201ENST00000440215 945 ntBASIC31.5■■■□□ 2.63
SPG7Q9UQ90 TSPY11P-201ENST00000442607 1045 ntBASIC31.5■■■□□ 2.63
SPG7Q9UQ90 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC31.5■■■□□ 2.63
SPG7Q9UQ90 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC31.5■■■□□ 2.63
SPG7Q9UQ90 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
SPG7Q9UQ90 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
SPG7Q9UQ90 SHF-206ENST00000560471 2499 ntTSL 5 BASIC31.49■■■□□ 2.63
SPG7Q9UQ90 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC31.49■■■□□ 2.63
SPG7Q9UQ90 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC31.49■■■□□ 2.63
SPG7Q9UQ90 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC31.49■■■□□ 2.63
SPG7Q9UQ90 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC31.49■■■□□ 2.63
SPG7Q9UQ90 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
SPG7Q9UQ90 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC31.48■■■□□ 2.63
SPG7Q9UQ90 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC31.48■■■□□ 2.63
SPG7Q9UQ90 MIR4281-201ENST00000580852 62 ntBASIC31.48■■■□□ 2.63
SPG7Q9UQ90 SHF-208ENST00000560734 1731 ntTSL 3 BASIC31.48■■■□□ 2.63
SPG7Q9UQ90 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
SPG7Q9UQ90 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC31.47■■■□□ 2.63
SPG7Q9UQ90 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
SPG7Q9UQ90 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC31.47■■■□□ 2.63
SPG7Q9UQ90 AC092028.1-203ENST00000608262 953 ntBASIC31.47■■■□□ 2.63
SPG7Q9UQ90 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
SPG7Q9UQ90 PEMT-206ENST00000435340 960 ntTSL 5 BASIC31.46■■■□□ 2.63
SPG7Q9UQ90 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
SPG7Q9UQ90 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
SPG7Q9UQ90 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC31.45■■■□□ 2.63
SPG7Q9UQ90 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC31.45■■■□□ 2.63
SPG7Q9UQ90 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
SPG7Q9UQ90 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
SPG7Q9UQ90 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC31.45■■■□□ 2.63
SPG7Q9UQ90 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC31.45■■■□□ 2.63
SPG7Q9UQ90 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC31.45■■■□□ 2.62
SPG7Q9UQ90 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.62
SPG7Q9UQ90 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
SPG7Q9UQ90 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC31.44■■■□□ 2.62
SPG7Q9UQ90 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC31.44■■■□□ 2.62
SPG7Q9UQ90 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
SPG7Q9UQ90 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC31.44■■■□□ 2.62
SPG7Q9UQ90 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
SPG7Q9UQ90 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC31.43■■■□□ 2.62
SPG7Q9UQ90 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC31.43■■■□□ 2.62
SPG7Q9UQ90 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC31.42■■■□□ 2.62
SPG7Q9UQ90 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC31.42■■■□□ 2.62
SPG7Q9UQ90 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC31.42■■■□□ 2.62
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms