Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC21.97■■□□□ 1.11
POLR2J3Q9H1A7 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
POLR2J3Q9H1A7 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
POLR2J3Q9H1A7 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
POLR2J3Q9H1A7 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
POLR2J3Q9H1A7 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
POLR2J3Q9H1A7 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
POLR2J3Q9H1A7 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC21.96■■□□□ 1.11
POLR2J3Q9H1A7 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC21.96■■□□□ 1.11
POLR2J3Q9H1A7 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
POLR2J3Q9H1A7 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
POLR2J3Q9H1A7 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
POLR2J3Q9H1A7 AC097639.1-201ENST00000565519 1891 ntBASIC21.95■■□□□ 1.1
POLR2J3Q9H1A7 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
POLR2J3Q9H1A7 AC025884.2-201ENST00000553429 711 ntBASIC21.95■■□□□ 1.1
POLR2J3Q9H1A7 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC21.95■■□□□ 1.1
POLR2J3Q9H1A7 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
POLR2J3Q9H1A7 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
POLR2J3Q9H1A7 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
POLR2J3Q9H1A7 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
POLR2J3Q9H1A7 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
POLR2J3Q9H1A7 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
POLR2J3Q9H1A7 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
POLR2J3Q9H1A7 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
POLR2J3Q9H1A7 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC21.94■■□□□ 1.1
POLR2J3Q9H1A7 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
POLR2J3Q9H1A7 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
POLR2J3Q9H1A7 AL157400.5-201ENST00000507624 621 ntBASIC21.93■■□□□ 1.1
POLR2J3Q9H1A7 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC21.93■■□□□ 1.1
POLR2J3Q9H1A7 MIR3960-201ENST00000583311 91 ntBASIC21.93■■□□□ 1.1
POLR2J3Q9H1A7 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC21.93■■□□□ 1.1
POLR2J3Q9H1A7 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
POLR2J3Q9H1A7 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
POLR2J3Q9H1A7 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
POLR2J3Q9H1A7 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
POLR2J3Q9H1A7 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
POLR2J3Q9H1A7 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
POLR2J3Q9H1A7 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
POLR2J3Q9H1A7 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
POLR2J3Q9H1A7 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
POLR2J3Q9H1A7 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
POLR2J3Q9H1A7 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
POLR2J3Q9H1A7 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
POLR2J3Q9H1A7 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
POLR2J3Q9H1A7 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC21.92■■□□□ 1.1
POLR2J3Q9H1A7 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC21.92■■□□□ 1.1
POLR2J3Q9H1A7 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC21.92■■□□□ 1.1
POLR2J3Q9H1A7 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
POLR2J3Q9H1A7 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC21.91■■□□□ 1.1
POLR2J3Q9H1A7 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC21.91■■□□□ 1.1
POLR2J3Q9H1A7 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
POLR2J3Q9H1A7 AC060814.1-201ENST00000554326 538 ntBASIC21.91■■□□□ 1.1
POLR2J3Q9H1A7 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
POLR2J3Q9H1A7 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
POLR2J3Q9H1A7 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
POLR2J3Q9H1A7 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
POLR2J3Q9H1A7 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC21.9■■□□□ 1.1
POLR2J3Q9H1A7 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
POLR2J3Q9H1A7 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
POLR2J3Q9H1A7 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC21.89■■□□□ 1.1
POLR2J3Q9H1A7 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.1
POLR2J3Q9H1A7 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.1
POLR2J3Q9H1A7 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
POLR2J3Q9H1A7 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
POLR2J3Q9H1A7 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
POLR2J3Q9H1A7 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
POLR2J3Q9H1A7 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
POLR2J3Q9H1A7 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
POLR2J3Q9H1A7 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
POLR2J3Q9H1A7 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC21.87■■□□□ 1.09
POLR2J3Q9H1A7 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
POLR2J3Q9H1A7 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC21.87■■□□□ 1.09
POLR2J3Q9H1A7 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC21.87■■□□□ 1.09
POLR2J3Q9H1A7 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
POLR2J3Q9H1A7 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
POLR2J3Q9H1A7 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC21.86■■□□□ 1.09
POLR2J3Q9H1A7 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
POLR2J3Q9H1A7 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
POLR2J3Q9H1A7 AP003733.4-201ENST00000623785 1697 ntBASIC21.86■■□□□ 1.09
POLR2J3Q9H1A7 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
POLR2J3Q9H1A7 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
POLR2J3Q9H1A7 MOB2-207ENST00000614710 705 ntTSL 5 BASIC21.86■■□□□ 1.09
POLR2J3Q9H1A7 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
POLR2J3Q9H1A7 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
POLR2J3Q9H1A7 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
POLR2J3Q9H1A7 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
POLR2J3Q9H1A7 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
POLR2J3Q9H1A7 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
POLR2J3Q9H1A7 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
POLR2J3Q9H1A7 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
POLR2J3Q9H1A7 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
POLR2J3Q9H1A7 REST-210ENST00000638187 1334 ntTSL 5 BASIC21.85■■□□□ 1.09
POLR2J3Q9H1A7 SMPD5-203ENST00000639008 1464 ntBASIC21.85■■□□□ 1.09
POLR2J3Q9H1A7 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
POLR2J3Q9H1A7 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
POLR2J3Q9H1A7 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
POLR2J3Q9H1A7 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
POLR2J3Q9H1A7 MIR639-201ENST00000384974 98 ntBASIC21.85■■□□□ 1.09
POLR2J3Q9H1A7 AC092296.2-201ENST00000589470 999 ntBASIC21.85■■□□□ 1.09
POLR2J3Q9H1A7 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC21.85■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 68.4 ms