Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
HDHD3Q9BSH5 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC20.1■□□□□ 0.81
HDHD3Q9BSH5 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
HDHD3Q9BSH5 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
HDHD3Q9BSH5 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
HDHD3Q9BSH5 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
HDHD3Q9BSH5 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
HDHD3Q9BSH5 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
HDHD3Q9BSH5 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
HDHD3Q9BSH5 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
HDHD3Q9BSH5 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
HDHD3Q9BSH5 AC097639.1-201ENST00000565519 1891 ntBASIC20.09■□□□□ 0.81
HDHD3Q9BSH5 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
HDHD3Q9BSH5 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC20.08■□□□□ 0.81
HDHD3Q9BSH5 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
HDHD3Q9BSH5 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
HDHD3Q9BSH5 SLC6A10P-202ENST00000431994 2058 ntBASIC20.08■□□□□ 0.81
HDHD3Q9BSH5 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC20.08■□□□□ 0.81
HDHD3Q9BSH5 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
HDHD3Q9BSH5 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
HDHD3Q9BSH5 LINC01124-201ENST00000409786 2117 ntBASIC20.08■□□□□ 0.8
HDHD3Q9BSH5 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
HDHD3Q9BSH5 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC20.07■□□□□ 0.8
HDHD3Q9BSH5 AC126177.7-201ENST00000547904 679 ntBASIC20.07■□□□□ 0.8
HDHD3Q9BSH5 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
HDHD3Q9BSH5 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
HDHD3Q9BSH5 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
HDHD3Q9BSH5 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
HDHD3Q9BSH5 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC20.06■□□□□ 0.8
HDHD3Q9BSH5 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC20.06■□□□□ 0.8
HDHD3Q9BSH5 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
HDHD3Q9BSH5 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
HDHD3Q9BSH5 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
HDHD3Q9BSH5 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
HDHD3Q9BSH5 METRNL-202ENST00000570778 967 ntTSL 5 BASIC20.06■□□□□ 0.8
HDHD3Q9BSH5 GDI1-215ENST00000630693 786 ntTSL 4 BASIC20.06■□□□□ 0.8
HDHD3Q9BSH5 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
HDHD3Q9BSH5 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
HDHD3Q9BSH5 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
HDHD3Q9BSH5 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
HDHD3Q9BSH5 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
HDHD3Q9BSH5 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
HDHD3Q9BSH5 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
HDHD3Q9BSH5 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
HDHD3Q9BSH5 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
HDHD3Q9BSH5 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC20.05■□□□□ 0.8
HDHD3Q9BSH5 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC20.05■□□□□ 0.8
HDHD3Q9BSH5 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
HDHD3Q9BSH5 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
HDHD3Q9BSH5 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
HDHD3Q9BSH5 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
HDHD3Q9BSH5 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
HDHD3Q9BSH5 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
HDHD3Q9BSH5 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
HDHD3Q9BSH5 ABHD17AP4-201ENST00000411545 909 ntBASIC20.04■□□□□ 0.8
HDHD3Q9BSH5 MIR3648-2-201ENST00000581792 180 ntBASIC20.04■□□□□ 0.8
HDHD3Q9BSH5 MIR3648-1-201ENST00000615959 180 ntBASIC20.04■□□□□ 0.8
HDHD3Q9BSH5 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
HDHD3Q9BSH5 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HDHD3Q9BSH5 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HDHD3Q9BSH5 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HDHD3Q9BSH5 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
HDHD3Q9BSH5 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
HDHD3Q9BSH5 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
HDHD3Q9BSH5 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC20.04■□□□□ 0.8
HDHD3Q9BSH5 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
HDHD3Q9BSH5 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
HDHD3Q9BSH5 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
HDHD3Q9BSH5 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
HDHD3Q9BSH5 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC20.03■□□□□ 0.8
HDHD3Q9BSH5 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC20.03■□□□□ 0.8
HDHD3Q9BSH5 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC20.03■□□□□ 0.8
HDHD3Q9BSH5 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC20.03■□□□□ 0.8
HDHD3Q9BSH5 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HDHD3Q9BSH5 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC20.02■□□□□ 0.8
HDHD3Q9BSH5 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
HDHD3Q9BSH5 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
HDHD3Q9BSH5 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
HDHD3Q9BSH5 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
HDHD3Q9BSH5 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
HDHD3Q9BSH5 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
HDHD3Q9BSH5 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
HDHD3Q9BSH5 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC20.01■□□□□ 0.79
HDHD3Q9BSH5 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
HDHD3Q9BSH5 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
HDHD3Q9BSH5 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
HDHD3Q9BSH5 AP003733.4-201ENST00000623785 1697 ntBASIC20.01■□□□□ 0.79
HDHD3Q9BSH5 LTK-203ENST00000453182 2412 ntTSL 2 BASIC20.01■□□□□ 0.79
HDHD3Q9BSH5 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
HDHD3Q9BSH5 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
HDHD3Q9BSH5 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC20.01■□□□□ 0.79
HDHD3Q9BSH5 AC016575.1-201ENST00000607026 382 ntBASIC20.01■□□□□ 0.79
HDHD3Q9BSH5 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
HDHD3Q9BSH5 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC20■□□□□ 0.79
HDHD3Q9BSH5 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC20■□□□□ 0.79
HDHD3Q9BSH5 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC20■□□□□ 0.79
HDHD3Q9BSH5 EED-207ENST00000528180 1745 ntTSL 5 BASIC20■□□□□ 0.79
HDHD3Q9BSH5 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC20■□□□□ 0.79
HDHD3Q9BSH5 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
HDHD3Q9BSH5 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 111.3 ms