Protein–RNA interactions for Protein: Q8NC96

NECAP1, Adaptin ear-binding coat-associated protein 1, humanhuman

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1Q8NC96 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NECAP1Q8NC96 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC19.17■□□□□ 0.66
NECAP1Q8NC96 CEBPA-AS1-201ENST00000592982 2198 ntBASIC19.17■□□□□ 0.66
NECAP1Q8NC96 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
NECAP1Q8NC96 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NECAP1Q8NC96 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
NECAP1Q8NC96 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NECAP1Q8NC96 SRP68-213ENST00000629930 165 ntTSL 5 BASIC19.16■□□□□ 0.66
NECAP1Q8NC96 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NECAP1Q8NC96 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NECAP1Q8NC96 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NECAP1Q8NC96 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NECAP1Q8NC96 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC19.15■□□□□ 0.66
NECAP1Q8NC96 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC19.15■□□□□ 0.66
NECAP1Q8NC96 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC19.15■□□□□ 0.66
NECAP1Q8NC96 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC19.15■□□□□ 0.66
NECAP1Q8NC96 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC19.15■□□□□ 0.66
NECAP1Q8NC96 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC19.14■□□□□ 0.66
NECAP1Q8NC96 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC19.14■□□□□ 0.66
NECAP1Q8NC96 DUSP8P4-201ENST00000399538 1761 ntBASIC19.14■□□□□ 0.66
NECAP1Q8NC96 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC19.14■□□□□ 0.65
NECAP1Q8NC96 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
NECAP1Q8NC96 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
NECAP1Q8NC96 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
NECAP1Q8NC96 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC19.14■□□□□ 0.65
NECAP1Q8NC96 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
NECAP1Q8NC96 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
NECAP1Q8NC96 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
NECAP1Q8NC96 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
NECAP1Q8NC96 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
NECAP1Q8NC96 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NECAP1Q8NC96 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NECAP1Q8NC96 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NECAP1Q8NC96 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NECAP1Q8NC96 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
NECAP1Q8NC96 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NECAP1Q8NC96 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
NECAP1Q8NC96 AC060814.1-201ENST00000554326 538 ntBASIC19.13■□□□□ 0.65
NECAP1Q8NC96 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
NECAP1Q8NC96 AL359504.2-201ENST00000605506 1601 ntBASIC19.13■□□□□ 0.65
NECAP1Q8NC96 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NECAP1Q8NC96 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NECAP1Q8NC96 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
NECAP1Q8NC96 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
NECAP1Q8NC96 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
NECAP1Q8NC96 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NECAP1Q8NC96 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
NECAP1Q8NC96 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
NECAP1Q8NC96 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
NECAP1Q8NC96 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
NECAP1Q8NC96 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
NECAP1Q8NC96 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC19.11■□□□□ 0.65
NECAP1Q8NC96 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NECAP1Q8NC96 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NECAP1Q8NC96 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
NECAP1Q8NC96 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
NECAP1Q8NC96 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC19.11■□□□□ 0.65
NECAP1Q8NC96 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC19.11■□□□□ 0.65
NECAP1Q8NC96 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NECAP1Q8NC96 AC092803.2-201ENST00000564287 1899 ntBASIC19.1■□□□□ 0.65
NECAP1Q8NC96 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
NECAP1Q8NC96 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NECAP1Q8NC96 AC022413.1-201ENST00000624602 984 ntBASIC19.1■□□□□ 0.65
NECAP1Q8NC96 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC19.1■□□□□ 0.65
NECAP1Q8NC96 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NECAP1Q8NC96 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
NECAP1Q8NC96 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
NECAP1Q8NC96 ERN1-208ENST00000606895 2068 ntBASIC19.1■□□□□ 0.65
NECAP1Q8NC96 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NECAP1Q8NC96 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
NECAP1Q8NC96 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NECAP1Q8NC96 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NECAP1Q8NC96 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NECAP1Q8NC96 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NECAP1Q8NC96 CEP120-209ENST00000515110 606 ntTSL 3 BASIC19.09■□□□□ 0.65
NECAP1Q8NC96 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
NECAP1Q8NC96 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NECAP1Q8NC96 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
NECAP1Q8NC96 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NECAP1Q8NC96 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC19.09■□□□□ 0.65
NECAP1Q8NC96 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
NECAP1Q8NC96 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
NECAP1Q8NC96 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.65
NECAP1Q8NC96 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
NECAP1Q8NC96 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
NECAP1Q8NC96 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
NECAP1Q8NC96 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
NECAP1Q8NC96 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
NECAP1Q8NC96 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
NECAP1Q8NC96 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
NECAP1Q8NC96 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC19.08■□□□□ 0.64
NECAP1Q8NC96 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
NECAP1Q8NC96 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC19.08■□□□□ 0.64
NECAP1Q8NC96 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC19.08■□□□□ 0.64
NECAP1Q8NC96 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.64
NECAP1Q8NC96 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
NECAP1Q8NC96 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
NECAP1Q8NC96 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC19.07■□□□□ 0.64
NECAP1Q8NC96 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NECAP1Q8NC96 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms