Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC36.93■■■■□ 3.5
CDC42BPAQ5VT25 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC36.92■■■■□ 3.5
CDC42BPAQ5VT25 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC36.92■■■■□ 3.5
CDC42BPAQ5VT25 SENP5-202ENST00000419026 973 ntTSL 3 BASIC36.92■■■■□ 3.5
CDC42BPAQ5VT25 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC36.92■■■■□ 3.5
CDC42BPAQ5VT25 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC36.92■■■■□ 3.5
CDC42BPAQ5VT25 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC36.92■■■■□ 3.5
CDC42BPAQ5VT25 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC36.91■■■■□ 3.5
CDC42BPAQ5VT25 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC36.9■■■■□ 3.5
CDC42BPAQ5VT25 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC36.89■■■■□ 3.5
CDC42BPAQ5VT25 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC36.89■■■■□ 3.5
CDC42BPAQ5VT25 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC36.88■■■■□ 3.5
CDC42BPAQ5VT25 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC36.88■■■■□ 3.49
CDC42BPAQ5VT25 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC36.88■■■■□ 3.49
CDC42BPAQ5VT25 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC36.88■■■■□ 3.49
CDC42BPAQ5VT25 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC36.88■■■■□ 3.49
CDC42BPAQ5VT25 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC36.88■■■■□ 3.49
CDC42BPAQ5VT25 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC36.87■■■■□ 3.49
CDC42BPAQ5VT25 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC36.87■■■■□ 3.49
CDC42BPAQ5VT25 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC36.87■■■■□ 3.49
CDC42BPAQ5VT25 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC36.87■■■■□ 3.49
CDC42BPAQ5VT25 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC36.87■■■■□ 3.49
CDC42BPAQ5VT25 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC36.87■■■■□ 3.49
CDC42BPAQ5VT25 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC36.87■■■■□ 3.49
CDC42BPAQ5VT25 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC36.86■■■■□ 3.49
CDC42BPAQ5VT25 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC36.86■■■■□ 3.49
CDC42BPAQ5VT25 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC36.86■■■■□ 3.49
CDC42BPAQ5VT25 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC36.86■■■■□ 3.49
CDC42BPAQ5VT25 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC36.86■■■■□ 3.49
CDC42BPAQ5VT25 MIR638-201ENST00000385237 100 ntBASIC36.86■■■■□ 3.49
CDC42BPAQ5VT25 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC36.86■■■■□ 3.49
CDC42BPAQ5VT25 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC36.86■■■■□ 3.49
CDC42BPAQ5VT25 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC36.86■■■■□ 3.49
CDC42BPAQ5VT25 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC36.86■■■■□ 3.49
CDC42BPAQ5VT25 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC36.86■■■■□ 3.49
CDC42BPAQ5VT25 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC36.86■■■■□ 3.49
CDC42BPAQ5VT25 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC36.85■■■■□ 3.49
CDC42BPAQ5VT25 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC36.85■■■■□ 3.49
CDC42BPAQ5VT25 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC36.85■■■■□ 3.49
CDC42BPAQ5VT25 AC139426.1-201ENST00000568218 2529 ntBASIC36.85■■■■□ 3.49
CDC42BPAQ5VT25 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC36.85■■■■□ 3.49
CDC42BPAQ5VT25 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC36.85■■■■□ 3.49
CDC42BPAQ5VT25 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC36.84■■■■□ 3.49
CDC42BPAQ5VT25 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC36.84■■■■□ 3.49
CDC42BPAQ5VT25 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC36.84■■■■□ 3.49
CDC42BPAQ5VT25 TRIR-202ENST00000588213 841 ntTSL 3 BASIC36.83■■■■□ 3.49
CDC42BPAQ5VT25 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC36.83■■■■□ 3.49
CDC42BPAQ5VT25 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC36.83■■■■□ 3.49
CDC42BPAQ5VT25 PEMT-206ENST00000435340 960 ntTSL 5 BASIC36.82■■■■□ 3.49
CDC42BPAQ5VT25 TSPY9P-201ENST00000440215 945 ntBASIC36.82■■■■□ 3.49
CDC42BPAQ5VT25 TSPY11P-201ENST00000442607 1045 ntBASIC36.82■■■■□ 3.49
CDC42BPAQ5VT25 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC36.82■■■■□ 3.49
CDC42BPAQ5VT25 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC36.81■■■■□ 3.48
CDC42BPAQ5VT25 AC011551.1-201ENST00000614101 683 ntBASIC36.81■■■■□ 3.48
CDC42BPAQ5VT25 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC36.8■■■■□ 3.48
CDC42BPAQ5VT25 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC36.8■■■■□ 3.48
CDC42BPAQ5VT25 AC092028.1-203ENST00000608262 953 ntBASIC36.8■■■■□ 3.48
CDC42BPAQ5VT25 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC36.8■■■■□ 3.48
CDC42BPAQ5VT25 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC36.79■■■■□ 3.48
CDC42BPAQ5VT25 AL117332.1-201ENST00000622628 974 ntBASIC36.79■■■■□ 3.48
CDC42BPAQ5VT25 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC36.79■■■■□ 3.48
CDC42BPAQ5VT25 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC36.79■■■■□ 3.48
CDC42BPAQ5VT25 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC36.79■■■■□ 3.48
CDC42BPAQ5VT25 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC36.78■■■■□ 3.48
CDC42BPAQ5VT25 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC36.77■■■■□ 3.48
CDC42BPAQ5VT25 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC36.77■■■■□ 3.48
CDC42BPAQ5VT25 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC36.77■■■■□ 3.48
CDC42BPAQ5VT25 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC36.77■■■■□ 3.48
CDC42BPAQ5VT25 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC36.76■■■■□ 3.48
CDC42BPAQ5VT25 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC36.76■■■■□ 3.48
CDC42BPAQ5VT25 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC36.76■■■■□ 3.47
CDC42BPAQ5VT25 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC36.76■■■■□ 3.47
CDC42BPAQ5VT25 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC36.75■■■■□ 3.47
CDC42BPAQ5VT25 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC36.74■■■■□ 3.47
CDC42BPAQ5VT25 AP004609.3-201ENST00000610705 1884 ntBASIC36.74■■■■□ 3.47
CDC42BPAQ5VT25 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC36.74■■■■□ 3.47
CDC42BPAQ5VT25 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC36.74■■■■□ 3.47
CDC42BPAQ5VT25 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC36.73■■■■□ 3.47
CDC42BPAQ5VT25 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC36.73■■■■□ 3.47
CDC42BPAQ5VT25 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC36.73■■■■□ 3.47
CDC42BPAQ5VT25 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC36.73■■■■□ 3.47
CDC42BPAQ5VT25 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC36.73■■■■□ 3.47
CDC42BPAQ5VT25 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC36.73■■■■□ 3.47
CDC42BPAQ5VT25 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC36.73■■■■□ 3.47
CDC42BPAQ5VT25 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC36.73■■■■□ 3.47
CDC42BPAQ5VT25 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC36.72■■■■□ 3.47
CDC42BPAQ5VT25 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC36.72■■■■□ 3.47
CDC42BPAQ5VT25 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC36.72■■■■□ 3.47
CDC42BPAQ5VT25 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC36.72■■■■□ 3.47
CDC42BPAQ5VT25 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC36.71■■■■□ 3.47
CDC42BPAQ5VT25 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC36.71■■■■□ 3.47
CDC42BPAQ5VT25 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC36.71■■■■□ 3.47
CDC42BPAQ5VT25 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC36.71■■■■□ 3.47
CDC42BPAQ5VT25 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC36.71■■■■□ 3.47
CDC42BPAQ5VT25 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC36.7■■■■□ 3.47
CDC42BPAQ5VT25 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC36.7■■■■□ 3.47
CDC42BPAQ5VT25 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC36.7■■■■□ 3.47
CDC42BPAQ5VT25 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC36.7■■■■□ 3.47
CDC42BPAQ5VT25 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC36.7■■■■□ 3.47
CDC42BPAQ5VT25 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC36.69■■■■□ 3.46
Retrieved 100 of 98,524 protein–RNA pairs in 266.1 ms