Protein–RNA interactions for Protein: P83110

HTRA3, Serine protease HTRA3, humanhuman

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTRA3P83110 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC28.65■■■□□ 2.18
HTRA3P83110 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
HTRA3P83110 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
HTRA3P83110 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC28.65■■■□□ 2.18
HTRA3P83110 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC28.64■■■□□ 2.17
HTRA3P83110 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC28.63■■■□□ 2.17
HTRA3P83110 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC28.63■■■□□ 2.17
HTRA3P83110 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC28.63■■■□□ 2.17
HTRA3P83110 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC28.62■■■□□ 2.17
HTRA3P83110 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC28.62■■■□□ 2.17
HTRA3P83110 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
HTRA3P83110 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC28.61■■■□□ 2.17
HTRA3P83110 ID1-201ENST00000376105 1233 ntBASIC28.61■■■□□ 2.17
HTRA3P83110 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC28.61■■■□□ 2.17
HTRA3P83110 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
HTRA3P83110 GRAMD4P4-201ENST00000613563 1115 ntBASIC28.61■■■□□ 2.17
HTRA3P83110 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC28.61■■■□□ 2.17
HTRA3P83110 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC28.61■■■□□ 2.17
HTRA3P83110 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC28.61■■■□□ 2.17
HTRA3P83110 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC28.61■■■□□ 2.17
HTRA3P83110 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
HTRA3P83110 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC28.6■■■□□ 2.17
HTRA3P83110 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC28.6■■■□□ 2.17
HTRA3P83110 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC28.6■■■□□ 2.17
HTRA3P83110 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC28.59■■■□□ 2.17
HTRA3P83110 CD72-202ENST00000378430 585 ntTSL 3 BASIC28.58■■■□□ 2.17
HTRA3P83110 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC28.58■■■□□ 2.17
HTRA3P83110 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
HTRA3P83110 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC28.57■■■□□ 2.16
HTRA3P83110 AC022517.1-201ENST00000592429 346 ntBASIC28.57■■■□□ 2.16
HTRA3P83110 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC28.57■■■□□ 2.16
HTRA3P83110 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC28.56■■■□□ 2.16
HTRA3P83110 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
HTRA3P83110 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC28.56■■■□□ 2.16
HTRA3P83110 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
HTRA3P83110 MIR939-201ENST00000401314 82 ntBASIC28.56■■■□□ 2.16
HTRA3P83110 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC28.56■■■□□ 2.16
HTRA3P83110 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC28.56■■■□□ 2.16
HTRA3P83110 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC28.56■■■□□ 2.16
HTRA3P83110 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC28.56■■■□□ 2.16
HTRA3P83110 AL137784.2-201ENST00000607332 1000 ntBASIC28.56■■■□□ 2.16
HTRA3P83110 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
HTRA3P83110 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC28.55■■■□□ 2.16
HTRA3P83110 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
HTRA3P83110 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
HTRA3P83110 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC28.54■■■□□ 2.16
HTRA3P83110 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC28.54■■■□□ 2.16
HTRA3P83110 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
HTRA3P83110 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC28.54■■■□□ 2.16
HTRA3P83110 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC28.53■■■□□ 2.16
HTRA3P83110 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC28.53■■■□□ 2.16
HTRA3P83110 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC28.53■■■□□ 2.16
HTRA3P83110 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC28.53■■■□□ 2.16
HTRA3P83110 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC28.53■■■□□ 2.16
HTRA3P83110 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC28.53■■■□□ 2.16
HTRA3P83110 CLTA-210ENST00000540080 989 ntTSL 2 BASIC28.53■■■□□ 2.16
HTRA3P83110 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC28.52■■■□□ 2.16
HTRA3P83110 AP001330.3-201ENST00000520123 633 ntBASIC28.52■■■□□ 2.16
HTRA3P83110 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC28.52■■■□□ 2.16
HTRA3P83110 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC28.52■■■□□ 2.16
HTRA3P83110 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC28.52■■■□□ 2.16
HTRA3P83110 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC28.52■■■□□ 2.16
HTRA3P83110 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
HTRA3P83110 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC28.51■■■□□ 2.15
HTRA3P83110 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
HTRA3P83110 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC28.5■■■□□ 2.15
HTRA3P83110 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC28.5■■■□□ 2.15
HTRA3P83110 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC28.5■■■□□ 2.15
HTRA3P83110 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC28.5■■■□□ 2.15
HTRA3P83110 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC28.5■■■□□ 2.15
HTRA3P83110 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
HTRA3P83110 AC092437.1-201ENST00000624794 1048 ntBASIC28.49■■■□□ 2.15
HTRA3P83110 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
HTRA3P83110 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
HTRA3P83110 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC28.48■■■□□ 2.15
HTRA3P83110 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC28.48■■■□□ 2.15
HTRA3P83110 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC28.47■■■□□ 2.15
HTRA3P83110 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC28.47■■■□□ 2.15
HTRA3P83110 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
HTRA3P83110 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC28.46■■■□□ 2.15
HTRA3P83110 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
HTRA3P83110 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC28.46■■■□□ 2.15
HTRA3P83110 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
HTRA3P83110 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC28.45■■■□□ 2.14
HTRA3P83110 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC28.45■■■□□ 2.14
HTRA3P83110 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC28.45■■■□□ 2.14
HTRA3P83110 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC28.44■■■□□ 2.14
HTRA3P83110 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC28.44■■■□□ 2.14
HTRA3P83110 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC28.44■■■□□ 2.14
HTRA3P83110 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
HTRA3P83110 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
HTRA3P83110 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
HTRA3P83110 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC28.42■■■□□ 2.14
HTRA3P83110 TFPT-201ENST00000391757 774 ntTSL 5 BASIC28.42■■■□□ 2.14
HTRA3P83110 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC28.42■■■□□ 2.14
HTRA3P83110 ASB1-202ENST00000409297 878 ntTSL 5 BASIC28.42■■■□□ 2.14
HTRA3P83110 AC091305.1-201ENST00000479476 895 ntBASIC28.42■■■□□ 2.14
HTRA3P83110 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC28.42■■■□□ 2.14
HTRA3P83110 MAG-206ENST00000597035 542 ntTSL 4 BASIC28.42■■■□□ 2.14
HTRA3P83110 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC28.42■■■□□ 2.14
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms