RNA–Protein interactions for RNA: ENST00000617161.1

CA9-204, Transcript of carbonic anhydrase 9, humanhuman

TSL 1 (best) BASIC

Gene CA9, Length 1,374 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CA9-204ENST00000617161 NISCHQ9Y2I1 1504 aa55.82■■■■■ 6.53
CA9-204ENST00000617161 CCDC180Q9P1Z9 1646 aa49.68■■■■■ 5.54
CA9-204ENST00000617161 ABCC9O60706 1549 aa48.81■■■■■ 5.4
CA9-204ENST00000617161 RB1CC1Q8TDY2 1594 aa46.83■■■■■ 5.09
CA9-204ENST00000617161 NACADO15069 1562 aa46.74■■■■■ 5.07
CA9-204ENST00000617161 DCAF8L2P0C7V8 631 aa46.61■■■■■ 5.05
CA9-204ENST00000617161 ZCCHC6Q5VYS8 1495 aaKnown RBP46.47■■■■■ 5.03
CA9-204ENST00000617161 MYO15BQ96JP2 1530 aa46.41■■■■■ 5.02
CA9-204ENST00000617161 DCAF1Q9Y4B6 1507 aa46.15■■■■■ 4.98
CA9-204ENST00000617161 UNC13AQ9UPW8 1703 aa45.9■■■■■ 4.94
CA9-204ENST00000617161 PABPN1Q86U42 306 aaKnown RBP eCLIP45.58■■■■■ 4.89
CA9-204ENST00000617161 BICRAQ9NZM4 1560 aa45.54■■■■■ 4.88
CA9-204ENST00000617161 SCRIBQ14160 1630 aa45.35■■■■■ 4.85
CA9-204ENST00000617161 DNAJC5BQ9UF47 199 aa45.07■■■■■ 4.8
CA9-204ENST00000617161 SHROOM4Q9ULL8 1493 aa44.89■■■■■ 4.78
CA9-204ENST00000617161 EIF4G1Q04637 1599 aaKnown RBP44.3■■■■■ 4.68
CA9-204ENST00000617161 CC2D2AQ9P2K1 1620 aa44.17■■■■■ 4.66
CA9-204ENST00000617161 CECR2Q9BXF3 1484 aa43.86■■■■■ 4.61
CA9-204ENST00000617161 SMARCA4P51532 1647 aa43.36■■■■■ 4.53
CA9-204ENST00000617161 BAZ1AQ9NRL2 1556 aaPredicted RBP43.24■■■■■ 4.51
CA9-204ENST00000617161 ATAD2BQ9ULI0 1458 aa43.16■■■■■ 4.5
CA9-204ENST00000617161 NCAPD3P42695 1498 aa43.16■■■■■ 4.5
CA9-204ENST00000617161 MROH2BQ7Z745 1585 aa43.06■■■■■ 4.48
CA9-204ENST00000617161 SMARCA2P51531 1590 aa43.05■■■■■ 4.48
CA9-204ENST00000617161 PEG3Q9GZU2 1588 aa42.95■■■■■ 4.47
CA9-204ENST00000617161 HMGXB3Q12766 1538 aa42.92■■■■■ 4.46
CA9-204ENST00000617161 BAZ1BQ9UIG0 1483 aaKnown RBP42.75■■■■■ 4.43
CA9-204ENST00000617161 WIZO95785 1651 aa42.59■■■■■ 4.41
CA9-204ENST00000617161 RSF1Q96T23 1441 aaPredicted RBP42.47■■■■■ 4.39
CA9-204ENST00000617161 NESP48681 1621 aa42.24■■■■■ 4.35
CA9-204ENST00000617161 TOP2AP11388 1531 aaKnown RBP42.07■■■■■ 4.33
CA9-204ENST00000617161 LAMC3Q9Y6N6 1575 aa42.02■■■■■ 4.32
CA9-204ENST00000617161 ERCC6Q03468 1493 aa42.01■■■■■ 4.32
CA9-204ENST00000617161 CADPSQ9ULU8 1353 aa41.87■■■■■ 4.29
CA9-204ENST00000617161 KIF21AQ7Z4S6 1674 aa41.73■■■■■ 4.27
CA9-204ENST00000617161 PDS5BQ9NTI5 1447 aa41.7■■■■■ 4.27
CA9-204ENST00000617161 CUX2O14529 1486 aa41.66■■■■■ 4.26
CA9-204ENST00000617161 THOC2Q8NI27 1593 aaKnown RBP41.63■■■■■ 4.25
CA9-204ENST00000617161 CFTRP13569 1480 aa41.62■■■■■ 4.25
CA9-204ENST00000617161 CCDC88BA6NC98 1476 aa41.6■■■■■ 4.25
CA9-204ENST00000617161 FANCD2Q9BXW9 1451 aa41.4■■■■■ 4.22
CA9-204ENST00000617161 CEP164Q9UPV0 1460 aa41.34■■■■■ 4.21
CA9-204ENST00000617161 MRC2Q9UBG0 1479 aa41.33■■■■■ 4.21
CA9-204ENST00000617161 PRDM2Q13029 1718 aa41.29■■■■■ 4.2
CA9-204ENST00000617161 WDR62O43379 1518 aa41.24■■■■■ 4.19
CA9-204ENST00000617161 SUPT5HO00267 1087 aaKnown RBP41.19■■■■■ 4.18
CA9-204ENST00000617161 URB2Q14146 1524 aaKnown RBP41.05■■■■■ 4.16
CA9-204ENST00000617161 TOPBP1Q92547 1522 aa40.73■■■■■ 4.11
CA9-204ENST00000617161 DNMBPQ6XZF7 1577 aa40.66■■■■■ 4.1
CA9-204ENST00000617161 ABCC8Q09428 1581 aa40.63■■■■■ 4.09
CA9-204ENST00000617161 DNAJC5Q9H3Z4 198 aa40.62■■■■■ 4.09
CA9-204ENST00000617161 IFT140Q96RY7 1462 aa40.48■■■■■ 4.07
CA9-204ENST00000617161 ZNF608Q9ULD9 1512 aaPredicted RBP40.4■■■■■ 4.06
CA9-204ENST00000617161 CUX1P39880 1505 aa40.39■■■■■ 4.06
CA9-204ENST00000617161 POLA1P09884 1462 aaPredicted RBP40.39■■■■■ 4.06
CA9-204ENST00000617161 TARBP1Q13395 1621 aaKnown RBP40.34■■■■■ 4.05
CA9-204ENST00000617161 FGD5Q6ZNL6 1462 aa40.25■■■■■ 4.03
CA9-204ENST00000617161 RAD54L2Q9Y4B4 1467 aa40.23■■■■■ 4.03
CA9-204ENST00000617161 EIF4G3O43432 1585 aaKnown RBP40.2■■■■■ 4.03
CA9-204ENST00000617161 SOGA1O94964 1423 aa40.16■■■■■ 4.02
CA9-204ENST00000617161 AQRO60306 1485 aaKnown RBP eCLIP40.13■■■■■ 4.01
CA9-204ENST00000617161 WRNQ14191 1432 aaPredicted RBP eCLIP40.01■■■■□ 3.99
CA9-204ENST00000617161 TDRD9Q8NDG6 1382 aaKnown RBP40■■■■□ 3.99
CA9-204ENST00000617161 SYNJ1O43426 1573 aa39.99■■■■□ 3.99
CA9-204ENST00000617161 WDR97A6NE52 1622 aa39.99■■■■□ 3.99
CA9-204ENST00000617161 BIVM-ERCC5R4GMW8 1640 aa39.98■■■■□ 3.99
CA9-204ENST00000617161 TOP2BQ02880 1626 aa39.97■■■■□ 3.99
CA9-204ENST00000617161 OSCARQ8IYS5 282 aa39.87■■■■□ 3.97
CA9-204ENST00000617161 ABCA10Q8WWZ4 1543 aa39.85■■■■□ 3.97
CA9-204ENST00000617161 CHD1O14646 1710 aa39.75■■■■□ 3.95
CA9-204ENST00000617161 ABCA5Q8WWZ7 1642 aa39.74■■■■□ 3.95
CA9-204ENST00000617161 SNAPC4Q5SXM2 1469 aa39.72■■■■□ 3.95
CA9-204ENST00000617161 GRIN2BQ13224 1484 aa39.72■■■■□ 3.95
CA9-204ENST00000617161 GAPVD1Q14C86 1478 aa39.72■■■■□ 3.95
CA9-204ENST00000617161 PBRM1Q86U86 1689 aa39.68■■■■□ 3.94
CA9-204ENST00000617161 MAGI1Q96QZ7 1491 aaPredicted RBP39.64■■■■□ 3.94
CA9-204ENST00000617161 FBLN2P98095 1184 aa39.59■■■■□ 3.93
CA9-204ENST00000617161 SYNJ2O15056 1496 aa39.49■■■■□ 3.91
CA9-204ENST00000617161 CHMP7Q8WUX9 453 aaPredicted RBP39.44■■■■□ 3.9
CA9-204ENST00000617161 ADAMTS12P58397 1594 aa39.36■■■■□ 3.89
CA9-204ENST00000617161 RIMBP3CA6NJZ7 1639 aa39.35■■■■□ 3.89
CA9-204ENST00000617161 RIMBP3BA6NNM3 1639 aa39.35■■■■□ 3.89
CA9-204ENST00000617161 RIMBP3Q9UFD9 1639 aa39.35■■■■□ 3.89
CA9-204ENST00000617161 ERICH3Q5RHP9 1530 aa39.34■■■■□ 3.89
CA9-204ENST00000617161 CLASP1Q7Z460 1538 aa39.31■■■■□ 3.88
CA9-204ENST00000617161 ARHGEF11O15085 1522 aa39.31■■■■□ 3.88
CA9-204ENST00000617161 GRIN2AQ12879 1464 aa39.24■■■■□ 3.87
CA9-204ENST00000617161 FHAD1B1AJZ9 1412 aa39.23■■■■□ 3.87
CA9-204ENST00000617161 TRIM41Q8WV44 630 aa39.18■■■■□ 3.86
CA9-204ENST00000617161 KIF27Q86VH2 1401 aa39.14■■■■□ 3.86
CA9-204ENST00000617161 CEP170Q5SW79 1584 aa39.1■■■■□ 3.85
CA9-204ENST00000617161 NUP160Q12769 1436 aa39.09■■■■□ 3.85
CA9-204ENST00000617161 IGF1RP08069 1367 aa39.08■■■■□ 3.85
CA9-204ENST00000617161 ARAP1Q96P48 1450 aa39■■■■□ 3.83
CA9-204ENST00000617161 CUL7Q14999 1698 aa38.94■■■■□ 3.82
CA9-204ENST00000617161 CYB5RLQ6IPT4 315 aa38.91■■■■□ 3.82
CA9-204ENST00000617161 RUSC2Q8N2Y8 1516 aa38.87■■■■□ 3.81
CA9-204ENST00000617161 SHROOM2Q13796 1616 aa38.84■■■■□ 3.81
CA9-204ENST00000617161 ERCC6L2Q5T890 1561 aa38.81■■■■□ 3.8
CA9-204ENST00000617161 CARMIL1Q5VZK9 1371 aa38.8■■■■□ 3.8
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms