Protein–RNA interactions for Protein: A6NL88

SHISA7, Protein shisa-7, humanhuman

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA7A6NL88 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC24.52■■□□□ 1.52
SHISA7A6NL88 NALT1-201ENST00000429224 738 ntTSL 5 BASIC24.51■■□□□ 1.51
SHISA7A6NL88 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC24.51■■□□□ 1.51
SHISA7A6NL88 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC24.5■■□□□ 1.51
SHISA7A6NL88 MIR4281-201ENST00000580852 62 ntBASIC24.5■■□□□ 1.51
SHISA7A6NL88 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC24.5■■□□□ 1.51
SHISA7A6NL88 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
SHISA7A6NL88 ST7-205ENST00000393446 2114 ntTSL 5 BASIC24.5■■□□□ 1.51
SHISA7A6NL88 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
SHISA7A6NL88 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
SHISA7A6NL88 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
SHISA7A6NL88 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
SHISA7A6NL88 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
SHISA7A6NL88 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC24.49■■□□□ 1.51
SHISA7A6NL88 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC24.49■■□□□ 1.51
SHISA7A6NL88 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
SHISA7A6NL88 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
SHISA7A6NL88 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC24.48■■□□□ 1.51
SHISA7A6NL88 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
SHISA7A6NL88 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC24.48■■□□□ 1.51
SHISA7A6NL88 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC24.48■■□□□ 1.51
SHISA7A6NL88 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC24.48■■□□□ 1.51
SHISA7A6NL88 SRR-208ENST00000576848 588 ntTSL 4 BASIC24.48■■□□□ 1.51
SHISA7A6NL88 AL117332.1-201ENST00000622628 974 ntBASIC24.48■■□□□ 1.51
SHISA7A6NL88 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
SHISA7A6NL88 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
SHISA7A6NL88 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC24.47■■□□□ 1.51
SHISA7A6NL88 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC24.47■■□□□ 1.51
SHISA7A6NL88 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC24.47■■□□□ 1.51
SHISA7A6NL88 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC24.47■■□□□ 1.51
SHISA7A6NL88 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC24.47■■□□□ 1.51
SHISA7A6NL88 AC110285.6-201ENST00000617652 491 ntBASIC24.47■■□□□ 1.51
SHISA7A6NL88 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
SHISA7A6NL88 LINC01003-201ENST00000564834 1764 ntBASIC24.47■■□□□ 1.51
SHISA7A6NL88 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC24.46■■□□□ 1.51
SHISA7A6NL88 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC24.46■■□□□ 1.51
SHISA7A6NL88 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC24.46■■□□□ 1.51
SHISA7A6NL88 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC24.46■■□□□ 1.51
SHISA7A6NL88 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC24.45■■□□□ 1.51
SHISA7A6NL88 MIR3621-201ENST00000580529 85 ntBASIC24.45■■□□□ 1.5
SHISA7A6NL88 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
SHISA7A6NL88 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC24.45■■□□□ 1.5
SHISA7A6NL88 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
SHISA7A6NL88 AL136116.3-201ENST00000402907 1138 ntBASIC24.44■■□□□ 1.5
SHISA7A6NL88 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
SHISA7A6NL88 SENP5-202ENST00000419026 973 ntTSL 3 BASIC24.44■■□□□ 1.5
SHISA7A6NL88 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC24.44■■□□□ 1.5
SHISA7A6NL88 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
SHISA7A6NL88 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
SHISA7A6NL88 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
SHISA7A6NL88 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
SHISA7A6NL88 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
SHISA7A6NL88 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC24.43■■□□□ 1.5
SHISA7A6NL88 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
SHISA7A6NL88 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC24.42■■□□□ 1.5
SHISA7A6NL88 LSM4-201ENST00000252816 986 ntTSL 2 BASIC24.42■■□□□ 1.5
SHISA7A6NL88 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC24.42■■□□□ 1.5
SHISA7A6NL88 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC24.42■■□□□ 1.5
SHISA7A6NL88 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
SHISA7A6NL88 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC24.41■■□□□ 1.5
SHISA7A6NL88 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC24.41■■□□□ 1.5
SHISA7A6NL88 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC24.41■■□□□ 1.5
SHISA7A6NL88 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC24.41■■□□□ 1.5
SHISA7A6NL88 MIR4466-201ENST00000606121 54 ntBASIC24.41■■□□□ 1.5
SHISA7A6NL88 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC24.4■■□□□ 1.5
SHISA7A6NL88 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC24.4■■□□□ 1.5
SHISA7A6NL88 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC24.4■■□□□ 1.5
SHISA7A6NL88 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC24.4■■□□□ 1.5
SHISA7A6NL88 AC142472.1-201ENST00000612013 1741 ntBASIC24.4■■□□□ 1.5
SHISA7A6NL88 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
SHISA7A6NL88 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
SHISA7A6NL88 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
SHISA7A6NL88 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC24.39■■□□□ 1.49
SHISA7A6NL88 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC24.39■■□□□ 1.49
SHISA7A6NL88 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC24.39■■□□□ 1.49
SHISA7A6NL88 AC010997.5-201ENST00000609182 354 ntBASIC24.39■■□□□ 1.49
SHISA7A6NL88 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
SHISA7A6NL88 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
SHISA7A6NL88 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC24.38■■□□□ 1.49
SHISA7A6NL88 QDPR-206ENST00000508623 601 ntTSL 3 BASIC24.38■■□□□ 1.49
SHISA7A6NL88 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC24.38■■□□□ 1.49
SHISA7A6NL88 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
SHISA7A6NL88 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
SHISA7A6NL88 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC24.38■■□□□ 1.49
SHISA7A6NL88 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
SHISA7A6NL88 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC24.38■■□□□ 1.49
SHISA7A6NL88 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
SHISA7A6NL88 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
SHISA7A6NL88 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC24.37■■□□□ 1.49
SHISA7A6NL88 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC24.37■■□□□ 1.49
SHISA7A6NL88 MIR6724-1-201ENST00000616420 92 ntBASIC24.37■■□□□ 1.49
SHISA7A6NL88 MIR6724-2-201ENST00000616483 92 ntBASIC24.37■■□□□ 1.49
SHISA7A6NL88 MIR6724-4-201ENST00000617390 92 ntBASIC24.37■■□□□ 1.49
SHISA7A6NL88 MIR6724-3-201ENST00000622482 92 ntBASIC24.37■■□□□ 1.49
SHISA7A6NL88 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC24.37■■□□□ 1.49
SHISA7A6NL88 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC24.37■■□□□ 1.49
SHISA7A6NL88 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC24.37■■□□□ 1.49
SHISA7A6NL88 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
SHISA7A6NL88 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC24.36■■□□□ 1.49
SHISA7A6NL88 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC24.36■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 160.8 ms