Protein–RNA interactions for Protein: A0A1B0GX49

TRBV6-4, T-cell receptor beta variable 6-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-4A0A1B0GX49 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC16.84■□□□□ 0.29
TRBV6-4A0A1B0GX49 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TRBV6-4A0A1B0GX49 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC16.84■□□□□ 0.29
TRBV6-4A0A1B0GX49 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRBV6-4A0A1B0GX49 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRBV6-4A0A1B0GX49 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TRBV6-4A0A1B0GX49 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC16.83■□□□□ 0.28
TRBV6-4A0A1B0GX49 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC16.83■□□□□ 0.28
TRBV6-4A0A1B0GX49 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRBV6-4A0A1B0GX49 AC022211.4-201ENST00000625094 2161 ntBASIC16.82■□□□□ 0.28
TRBV6-4A0A1B0GX49 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TRBV6-4A0A1B0GX49 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRBV6-4A0A1B0GX49 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRBV6-4A0A1B0GX49 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRBV6-4A0A1B0GX49 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC16.82■□□□□ 0.28
TRBV6-4A0A1B0GX49 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC16.82■□□□□ 0.28
TRBV6-4A0A1B0GX49 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
TRBV6-4A0A1B0GX49 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRBV6-4A0A1B0GX49 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TRBV6-4A0A1B0GX49 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC16.82■□□□□ 0.28
TRBV6-4A0A1B0GX49 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TRBV6-4A0A1B0GX49 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRBV6-4A0A1B0GX49 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRBV6-4A0A1B0GX49 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRBV6-4A0A1B0GX49 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC16.81■□□□□ 0.28
TRBV6-4A0A1B0GX49 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC16.81■□□□□ 0.28
TRBV6-4A0A1B0GX49 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRBV6-4A0A1B0GX49 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC16.81■□□□□ 0.28
TRBV6-4A0A1B0GX49 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
TRBV6-4A0A1B0GX49 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRBV6-4A0A1B0GX49 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
TRBV6-4A0A1B0GX49 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRBV6-4A0A1B0GX49 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TRBV6-4A0A1B0GX49 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC16.8■□□□□ 0.28
TRBV6-4A0A1B0GX49 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
TRBV6-4A0A1B0GX49 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
TRBV6-4A0A1B0GX49 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRBV6-4A0A1B0GX49 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRBV6-4A0A1B0GX49 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRBV6-4A0A1B0GX49 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC16.8■□□□□ 0.28
TRBV6-4A0A1B0GX49 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC16.8■□□□□ 0.28
TRBV6-4A0A1B0GX49 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRBV6-4A0A1B0GX49 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRBV6-4A0A1B0GX49 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRBV6-4A0A1B0GX49 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRBV6-4A0A1B0GX49 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRBV6-4A0A1B0GX49 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRBV6-4A0A1B0GX49 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
TRBV6-4A0A1B0GX49 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC16.79■□□□□ 0.28
TRBV6-4A0A1B0GX49 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC16.79■□□□□ 0.28
TRBV6-4A0A1B0GX49 RAP2CP1-202ENST00000605179 643 ntBASIC16.79■□□□□ 0.28
TRBV6-4A0A1B0GX49 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TRBV6-4A0A1B0GX49 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
TRBV6-4A0A1B0GX49 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRBV6-4A0A1B0GX49 RNF126P1-201ENST00000567452 1320 ntBASIC16.78■□□□□ 0.28
TRBV6-4A0A1B0GX49 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TRBV6-4A0A1B0GX49 HES4-204ENST00000484667 667 ntTSL 3 BASIC16.78■□□□□ 0.28
TRBV6-4A0A1B0GX49 ABHD17AP3-201ENST00000503096 1137 ntBASIC16.78■□□□□ 0.28
TRBV6-4A0A1B0GX49 AC026202.3-201ENST00000600805 1127 ntBASIC16.78■□□□□ 0.28
TRBV6-4A0A1B0GX49 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
TRBV6-4A0A1B0GX49 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRBV6-4A0A1B0GX49 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC16.77■□□□□ 0.28
TRBV6-4A0A1B0GX49 MED17-227ENST00000640521 2047 ntTSL 5 BASIC16.77■□□□□ 0.28
TRBV6-4A0A1B0GX49 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC16.77■□□□□ 0.28
TRBV6-4A0A1B0GX49 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TRBV6-4A0A1B0GX49 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRBV6-4A0A1B0GX49 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TRBV6-4A0A1B0GX49 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRBV6-4A0A1B0GX49 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
TRBV6-4A0A1B0GX49 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
TRBV6-4A0A1B0GX49 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
TRBV6-4A0A1B0GX49 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.27
TRBV6-4A0A1B0GX49 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRBV6-4A0A1B0GX49 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRBV6-4A0A1B0GX49 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRBV6-4A0A1B0GX49 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRBV6-4A0A1B0GX49 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRBV6-4A0A1B0GX49 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC16.76■□□□□ 0.27
TRBV6-4A0A1B0GX49 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
TRBV6-4A0A1B0GX49 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC16.76■□□□□ 0.27
TRBV6-4A0A1B0GX49 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRBV6-4A0A1B0GX49 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRBV6-4A0A1B0GX49 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRBV6-4A0A1B0GX49 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRBV6-4A0A1B0GX49 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRBV6-4A0A1B0GX49 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRBV6-4A0A1B0GX49 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TRBV6-4A0A1B0GX49 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRBV6-4A0A1B0GX49 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRBV6-4A0A1B0GX49 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC16.75■□□□□ 0.27
TRBV6-4A0A1B0GX49 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
TRBV6-4A0A1B0GX49 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TRBV6-4A0A1B0GX49 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRBV6-4A0A1B0GX49 AP003733.4-201ENST00000623785 1697 ntBASIC16.75■□□□□ 0.27
TRBV6-4A0A1B0GX49 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRBV6-4A0A1B0GX49 SLC6A10P-202ENST00000431994 2058 ntBASIC16.74■□□□□ 0.27
TRBV6-4A0A1B0GX49 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRBV6-4A0A1B0GX49 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC16.74■□□□□ 0.27
TRBV6-4A0A1B0GX49 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC16.74■□□□□ 0.27
TRBV6-4A0A1B0GX49 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms