Protein–RNA interactions for Protein: Q9Y6A2

CYP46A1, Cholesterol 24-hydroxylase, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP46A1Q9Y6A2 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC28.53■■■□□ 2.16
CYP46A1Q9Y6A2 ECEL1P2-201ENST00000461596 1295 ntBASIC28.53■■■□□ 2.16
CYP46A1Q9Y6A2 CEP120-209ENST00000515110 606 ntTSL 3 BASIC28.53■■■□□ 2.16
CYP46A1Q9Y6A2 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
CYP46A1Q9Y6A2 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC28.53■■■□□ 2.16
CYP46A1Q9Y6A2 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC28.53■■■□□ 2.16
CYP46A1Q9Y6A2 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
CYP46A1Q9Y6A2 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
CYP46A1Q9Y6A2 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC28.52■■■□□ 2.16
CYP46A1Q9Y6A2 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC28.52■■■□□ 2.16
CYP46A1Q9Y6A2 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC28.52■■■□□ 2.16
CYP46A1Q9Y6A2 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC28.52■■■□□ 2.16
CYP46A1Q9Y6A2 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC28.52■■■□□ 2.16
CYP46A1Q9Y6A2 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC28.52■■■□□ 2.16
CYP46A1Q9Y6A2 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC28.51■■■□□ 2.15
CYP46A1Q9Y6A2 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC28.51■■■□□ 2.15
CYP46A1Q9Y6A2 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC28.5■■■□□ 2.15
CYP46A1Q9Y6A2 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
CYP46A1Q9Y6A2 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
CYP46A1Q9Y6A2 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
CYP46A1Q9Y6A2 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
CYP46A1Q9Y6A2 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
CYP46A1Q9Y6A2 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC28.5■■■□□ 2.15
CYP46A1Q9Y6A2 REST-210ENST00000638187 1334 ntTSL 5 BASIC28.49■■■□□ 2.15
CYP46A1Q9Y6A2 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
CYP46A1Q9Y6A2 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
CYP46A1Q9Y6A2 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC28.49■■■□□ 2.15
CYP46A1Q9Y6A2 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC28.48■■■□□ 2.15
CYP46A1Q9Y6A2 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
CYP46A1Q9Y6A2 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC28.48■■■□□ 2.15
CYP46A1Q9Y6A2 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC28.48■■■□□ 2.15
CYP46A1Q9Y6A2 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
CYP46A1Q9Y6A2 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC28.47■■■□□ 2.15
CYP46A1Q9Y6A2 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC28.47■■■□□ 2.15
CYP46A1Q9Y6A2 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
CYP46A1Q9Y6A2 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC28.47■■■□□ 2.15
CYP46A1Q9Y6A2 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC28.47■■■□□ 2.15
CYP46A1Q9Y6A2 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC28.46■■■□□ 2.15
CYP46A1Q9Y6A2 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC28.46■■■□□ 2.15
CYP46A1Q9Y6A2 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
CYP46A1Q9Y6A2 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
CYP46A1Q9Y6A2 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC28.46■■■□□ 2.15
CYP46A1Q9Y6A2 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC28.46■■■□□ 2.15
CYP46A1Q9Y6A2 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC28.45■■■□□ 2.15
CYP46A1Q9Y6A2 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC28.45■■■□□ 2.14
CYP46A1Q9Y6A2 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
CYP46A1Q9Y6A2 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC28.45■■■□□ 2.14
CYP46A1Q9Y6A2 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
CYP46A1Q9Y6A2 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
CYP46A1Q9Y6A2 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
CYP46A1Q9Y6A2 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC28.43■■■□□ 2.14
CYP46A1Q9Y6A2 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC28.43■■■□□ 2.14
CYP46A1Q9Y6A2 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
CYP46A1Q9Y6A2 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC28.43■■■□□ 2.14
CYP46A1Q9Y6A2 SNAI3-AS1-204ENST00000567997 2048 ntBASIC28.42■■■□□ 2.14
CYP46A1Q9Y6A2 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC28.42■■■□□ 2.14
CYP46A1Q9Y6A2 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC28.42■■■□□ 2.14
CYP46A1Q9Y6A2 RP9P-202ENST00000450133 1212 ntBASIC28.42■■■□□ 2.14
CYP46A1Q9Y6A2 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC28.42■■■□□ 2.14
CYP46A1Q9Y6A2 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
CYP46A1Q9Y6A2 AC022211.4-201ENST00000625094 2161 ntBASIC28.41■■■□□ 2.14
CYP46A1Q9Y6A2 AC097639.1-201ENST00000565519 1891 ntBASIC28.41■■■□□ 2.14
CYP46A1Q9Y6A2 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
CYP46A1Q9Y6A2 GPX1-201ENST00000419349 1106 ntBASIC28.41■■■□□ 2.14
CYP46A1Q9Y6A2 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
CYP46A1Q9Y6A2 AC142381.3-201ENST00000568208 1670 ntBASIC28.41■■■□□ 2.14
CYP46A1Q9Y6A2 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
CYP46A1Q9Y6A2 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
CYP46A1Q9Y6A2 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC28.4■■■□□ 2.14
CYP46A1Q9Y6A2 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC28.4■■■□□ 2.14
CYP46A1Q9Y6A2 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
CYP46A1Q9Y6A2 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
CYP46A1Q9Y6A2 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC28.4■■■□□ 2.14
CYP46A1Q9Y6A2 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC28.4■■■□□ 2.14
CYP46A1Q9Y6A2 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC28.4■■■□□ 2.14
CYP46A1Q9Y6A2 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC28.4■■■□□ 2.14
CYP46A1Q9Y6A2 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC28.39■■■□□ 2.14
CYP46A1Q9Y6A2 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC28.39■■■□□ 2.14
CYP46A1Q9Y6A2 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC28.39■■■□□ 2.14
CYP46A1Q9Y6A2 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.13
CYP46A1Q9Y6A2 HES4-202ENST00000428771 1040 ntTSL 2 BASIC28.38■■■□□ 2.13
CYP46A1Q9Y6A2 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC28.38■■■□□ 2.13
CYP46A1Q9Y6A2 AC093536.1-201ENST00000569153 554 ntBASIC28.38■■■□□ 2.13
CYP46A1Q9Y6A2 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
CYP46A1Q9Y6A2 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
CYP46A1Q9Y6A2 MED17-227ENST00000640521 2047 ntTSL 5 BASIC28.37■■■□□ 2.13
CYP46A1Q9Y6A2 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC28.37■■■□□ 2.13
CYP46A1Q9Y6A2 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
CYP46A1Q9Y6A2 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC28.37■■■□□ 2.13
CYP46A1Q9Y6A2 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC28.37■■■□□ 2.13
CYP46A1Q9Y6A2 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC28.37■■■□□ 2.13
CYP46A1Q9Y6A2 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC28.36■■■□□ 2.13
CYP46A1Q9Y6A2 AC007029.1-201ENST00000604183 313 ntBASIC28.36■■■□□ 2.13
CYP46A1Q9Y6A2 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
CYP46A1Q9Y6A2 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
CYP46A1Q9Y6A2 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
CYP46A1Q9Y6A2 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
CYP46A1Q9Y6A2 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC28.35■■■□□ 2.13
CYP46A1Q9Y6A2 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC28.35■■■□□ 2.13
CYP46A1Q9Y6A2 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms