Protein–RNA interactions for Protein: Q9HCC6

HES4, Transcription factor HES-4, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HES4Q9HCC6 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC20.29■□□□□ 0.84
HES4Q9HCC6 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC20.28■□□□□ 0.84
HES4Q9HCC6 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HES4Q9HCC6 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
HES4Q9HCC6 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
HES4Q9HCC6 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC20.28■□□□□ 0.84
HES4Q9HCC6 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
HES4Q9HCC6 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
HES4Q9HCC6 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
HES4Q9HCC6 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
HES4Q9HCC6 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
HES4Q9HCC6 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
HES4Q9HCC6 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
HES4Q9HCC6 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
HES4Q9HCC6 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
HES4Q9HCC6 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC20.27■□□□□ 0.84
HES4Q9HCC6 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
HES4Q9HCC6 AC093536.1-201ENST00000569153 554 ntBASIC20.27■□□□□ 0.84
HES4Q9HCC6 GFER-205ENST00000569451 517 ntTSL 5 BASIC20.27■□□□□ 0.84
HES4Q9HCC6 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC20.27■□□□□ 0.84
HES4Q9HCC6 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC20.27■□□□□ 0.84
HES4Q9HCC6 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
HES4Q9HCC6 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC20.27■□□□□ 0.83
HES4Q9HCC6 AC020928.2-201ENST00000588717 2197 ntBASIC20.27■□□□□ 0.83
HES4Q9HCC6 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HES4Q9HCC6 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
HES4Q9HCC6 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC20.26■□□□□ 0.83
HES4Q9HCC6 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC20.26■□□□□ 0.83
HES4Q9HCC6 RNF126P1-201ENST00000567452 1320 ntBASIC20.26■□□□□ 0.83
HES4Q9HCC6 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC20.26■□□□□ 0.83
HES4Q9HCC6 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
HES4Q9HCC6 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HES4Q9HCC6 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HES4Q9HCC6 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
HES4Q9HCC6 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HES4Q9HCC6 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC20.25■□□□□ 0.83
HES4Q9HCC6 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HES4Q9HCC6 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
HES4Q9HCC6 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC20.25■□□□□ 0.83
HES4Q9HCC6 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
HES4Q9HCC6 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC20.25■□□□□ 0.83
HES4Q9HCC6 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
HES4Q9HCC6 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
HES4Q9HCC6 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC20.24■□□□□ 0.83
HES4Q9HCC6 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC20.24■□□□□ 0.83
HES4Q9HCC6 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
HES4Q9HCC6 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC20.24■□□□□ 0.83
HES4Q9HCC6 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC20.24■□□□□ 0.83
HES4Q9HCC6 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
HES4Q9HCC6 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
HES4Q9HCC6 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HES4Q9HCC6 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC20.24■□□□□ 0.83
HES4Q9HCC6 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
HES4Q9HCC6 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
HES4Q9HCC6 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
HES4Q9HCC6 RAP2CP1-202ENST00000605179 643 ntBASIC20.23■□□□□ 0.83
HES4Q9HCC6 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
HES4Q9HCC6 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
HES4Q9HCC6 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
HES4Q9HCC6 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
HES4Q9HCC6 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HES4Q9HCC6 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
HES4Q9HCC6 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
HES4Q9HCC6 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HES4Q9HCC6 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
HES4Q9HCC6 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HES4Q9HCC6 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
HES4Q9HCC6 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HES4Q9HCC6 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
HES4Q9HCC6 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC20.21■□□□□ 0.83
HES4Q9HCC6 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HES4Q9HCC6 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HES4Q9HCC6 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HES4Q9HCC6 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
HES4Q9HCC6 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
HES4Q9HCC6 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
HES4Q9HCC6 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
HES4Q9HCC6 AC026202.3-201ENST00000600805 1127 ntBASIC20.2■□□□□ 0.82
HES4Q9HCC6 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
HES4Q9HCC6 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
HES4Q9HCC6 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC20.19■□□□□ 0.82
HES4Q9HCC6 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC20.19■□□□□ 0.82
HES4Q9HCC6 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
HES4Q9HCC6 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
HES4Q9HCC6 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
HES4Q9HCC6 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
HES4Q9HCC6 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
HES4Q9HCC6 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
HES4Q9HCC6 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC20.18■□□□□ 0.82
HES4Q9HCC6 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
HES4Q9HCC6 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
HES4Q9HCC6 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
HES4Q9HCC6 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
HES4Q9HCC6 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
HES4Q9HCC6 AC097639.1-201ENST00000565519 1891 ntBASIC20.17■□□□□ 0.82
HES4Q9HCC6 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
HES4Q9HCC6 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
HES4Q9HCC6 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
HES4Q9HCC6 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
HES4Q9HCC6 AC135731.1-201ENST00000569415 2548 ntBASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 108.2 ms