Protein–RNA interactions for Protein: A0A1B0GX49

TRBV6-4, T-cell receptor beta variable 6-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-4A0A1B0GX49 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
TRBV6-4A0A1B0GX49 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRBV6-4A0A1B0GX49 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC16.95■□□□□ 0.3
TRBV6-4A0A1B0GX49 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
TRBV6-4A0A1B0GX49 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC16.95■□□□□ 0.3
TRBV6-4A0A1B0GX49 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRBV6-4A0A1B0GX49 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
TRBV6-4A0A1B0GX49 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
TRBV6-4A0A1B0GX49 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRBV6-4A0A1B0GX49 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRBV6-4A0A1B0GX49 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC16.94■□□□□ 0.3
TRBV6-4A0A1B0GX49 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
TRBV6-4A0A1B0GX49 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC16.94■□□□□ 0.3
TRBV6-4A0A1B0GX49 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC16.94■□□□□ 0.3
TRBV6-4A0A1B0GX49 MBP-237ENST00000579129 1052 ntTSL 5 BASIC16.94■□□□□ 0.3
TRBV6-4A0A1B0GX49 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRBV6-4A0A1B0GX49 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRBV6-4A0A1B0GX49 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC16.94■□□□□ 0.3
TRBV6-4A0A1B0GX49 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRBV6-4A0A1B0GX49 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TRBV6-4A0A1B0GX49 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TRBV6-4A0A1B0GX49 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRBV6-4A0A1B0GX49 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRBV6-4A0A1B0GX49 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TRBV6-4A0A1B0GX49 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRBV6-4A0A1B0GX49 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRBV6-4A0A1B0GX49 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC16.93■□□□□ 0.3
TRBV6-4A0A1B0GX49 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
TRBV6-4A0A1B0GX49 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
TRBV6-4A0A1B0GX49 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRBV6-4A0A1B0GX49 RP9P-202ENST00000450133 1212 ntBASIC16.92■□□□□ 0.3
TRBV6-4A0A1B0GX49 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC16.92■□□□□ 0.3
TRBV6-4A0A1B0GX49 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC16.92■□□□□ 0.3
TRBV6-4A0A1B0GX49 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TRBV6-4A0A1B0GX49 CEBPA-AS1-201ENST00000592982 2198 ntBASIC16.91■□□□□ 0.3
TRBV6-4A0A1B0GX49 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRBV6-4A0A1B0GX49 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRBV6-4A0A1B0GX49 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TRBV6-4A0A1B0GX49 AC097639.1-201ENST00000565519 1891 ntBASIC16.9■□□□□ 0.3
TRBV6-4A0A1B0GX49 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRBV6-4A0A1B0GX49 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TRBV6-4A0A1B0GX49 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRBV6-4A0A1B0GX49 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC16.9■□□□□ 0.3
TRBV6-4A0A1B0GX49 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC16.9■□□□□ 0.3
TRBV6-4A0A1B0GX49 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
TRBV6-4A0A1B0GX49 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC16.89■□□□□ 0.3
TRBV6-4A0A1B0GX49 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
TRBV6-4A0A1B0GX49 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRBV6-4A0A1B0GX49 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC16.89■□□□□ 0.29
TRBV6-4A0A1B0GX49 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRBV6-4A0A1B0GX49 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRBV6-4A0A1B0GX49 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
TRBV6-4A0A1B0GX49 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC16.89■□□□□ 0.29
TRBV6-4A0A1B0GX49 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC16.89■□□□□ 0.29
TRBV6-4A0A1B0GX49 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC16.89■□□□□ 0.29
TRBV6-4A0A1B0GX49 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC16.89■□□□□ 0.29
TRBV6-4A0A1B0GX49 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC16.89■□□□□ 0.29
TRBV6-4A0A1B0GX49 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TRBV6-4A0A1B0GX49 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TRBV6-4A0A1B0GX49 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRBV6-4A0A1B0GX49 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRBV6-4A0A1B0GX49 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRBV6-4A0A1B0GX49 SNAI3-AS1-204ENST00000567997 2048 ntBASIC16.88■□□□□ 0.29
TRBV6-4A0A1B0GX49 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRBV6-4A0A1B0GX49 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRBV6-4A0A1B0GX49 GPX1-201ENST00000419349 1106 ntBASIC16.88■□□□□ 0.29
TRBV6-4A0A1B0GX49 AC007029.1-201ENST00000604183 313 ntBASIC16.88■□□□□ 0.29
TRBV6-4A0A1B0GX49 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRBV6-4A0A1B0GX49 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TRBV6-4A0A1B0GX49 AC142381.3-201ENST00000568208 1670 ntBASIC16.88■□□□□ 0.29
TRBV6-4A0A1B0GX49 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
TRBV6-4A0A1B0GX49 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRBV6-4A0A1B0GX49 GFER-205ENST00000569451 517 ntTSL 5 BASIC16.87■□□□□ 0.29
TRBV6-4A0A1B0GX49 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRBV6-4A0A1B0GX49 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC16.86■□□□□ 0.29
TRBV6-4A0A1B0GX49 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRBV6-4A0A1B0GX49 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC16.86■□□□□ 0.29
TRBV6-4A0A1B0GX49 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC16.86■□□□□ 0.29
TRBV6-4A0A1B0GX49 AC093536.1-201ENST00000569153 554 ntBASIC16.86■□□□□ 0.29
TRBV6-4A0A1B0GX49 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC16.86■□□□□ 0.29
TRBV6-4A0A1B0GX49 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
TRBV6-4A0A1B0GX49 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC16.86■□□□□ 0.29
TRBV6-4A0A1B0GX49 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRBV6-4A0A1B0GX49 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRBV6-4A0A1B0GX49 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRBV6-4A0A1B0GX49 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TRBV6-4A0A1B0GX49 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRBV6-4A0A1B0GX49 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRBV6-4A0A1B0GX49 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRBV6-4A0A1B0GX49 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRBV6-4A0A1B0GX49 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRBV6-4A0A1B0GX49 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
TRBV6-4A0A1B0GX49 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRBV6-4A0A1B0GX49 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRBV6-4A0A1B0GX49 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRBV6-4A0A1B0GX49 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRBV6-4A0A1B0GX49 KRT18P10-201ENST00000388836 1287 ntBASIC16.84■□□□□ 0.29
TRBV6-4A0A1B0GX49 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TRBV6-4A0A1B0GX49 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
TRBV6-4A0A1B0GX49 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 173.5 ms