Protein–RNA interactions for Protein: A0A0J9YX44

TRBV5-5, T-cell receptor beta variable 5-5 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-5A0A0J9YX44 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
TRBV5-5A0A0J9YX44 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
TRBV5-5A0A0J9YX44 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TRBV5-5A0A0J9YX44 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TRBV5-5A0A0J9YX44 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRBV5-5A0A0J9YX44 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRBV5-5A0A0J9YX44 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRBV5-5A0A0J9YX44 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TRBV5-5A0A0J9YX44 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRBV5-5A0A0J9YX44 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRBV5-5A0A0J9YX44 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRBV5-5A0A0J9YX44 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC20.88■□□□□ 0.93
TRBV5-5A0A0J9YX44 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TRBV5-5A0A0J9YX44 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRBV5-5A0A0J9YX44 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC20.88■□□□□ 0.93
TRBV5-5A0A0J9YX44 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC20.88■□□□□ 0.93
TRBV5-5A0A0J9YX44 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRBV5-5A0A0J9YX44 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
TRBV5-5A0A0J9YX44 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRBV5-5A0A0J9YX44 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC20.87■□□□□ 0.93
TRBV5-5A0A0J9YX44 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC20.87■□□□□ 0.93
TRBV5-5A0A0J9YX44 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC20.87■□□□□ 0.93
TRBV5-5A0A0J9YX44 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRBV5-5A0A0J9YX44 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRBV5-5A0A0J9YX44 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRBV5-5A0A0J9YX44 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRBV5-5A0A0J9YX44 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRBV5-5A0A0J9YX44 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC20.86■□□□□ 0.93
TRBV5-5A0A0J9YX44 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC20.86■□□□□ 0.93
TRBV5-5A0A0J9YX44 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC20.86■□□□□ 0.93
TRBV5-5A0A0J9YX44 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
TRBV5-5A0A0J9YX44 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRBV5-5A0A0J9YX44 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRBV5-5A0A0J9YX44 LINC01124-201ENST00000409786 2117 ntBASIC20.86■□□□□ 0.93
TRBV5-5A0A0J9YX44 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRBV5-5A0A0J9YX44 AC097639.1-201ENST00000565519 1891 ntBASIC20.86■□□□□ 0.93
TRBV5-5A0A0J9YX44 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TRBV5-5A0A0J9YX44 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
TRBV5-5A0A0J9YX44 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
TRBV5-5A0A0J9YX44 HLA-V-202ENST00000446817 847 ntBASIC20.85■□□□□ 0.93
TRBV5-5A0A0J9YX44 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC20.85■□□□□ 0.93
TRBV5-5A0A0J9YX44 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
TRBV5-5A0A0J9YX44 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC20.85■□□□□ 0.93
TRBV5-5A0A0J9YX44 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TRBV5-5A0A0J9YX44 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC20.85■□□□□ 0.93
TRBV5-5A0A0J9YX44 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
TRBV5-5A0A0J9YX44 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TRBV5-5A0A0J9YX44 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC20.85■□□□□ 0.93
TRBV5-5A0A0J9YX44 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TRBV5-5A0A0J9YX44 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TRBV5-5A0A0J9YX44 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TRBV5-5A0A0J9YX44 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC20.84■□□□□ 0.93
TRBV5-5A0A0J9YX44 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC20.84■□□□□ 0.93
TRBV5-5A0A0J9YX44 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
TRBV5-5A0A0J9YX44 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
TRBV5-5A0A0J9YX44 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
TRBV5-5A0A0J9YX44 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
TRBV5-5A0A0J9YX44 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
TRBV5-5A0A0J9YX44 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
TRBV5-5A0A0J9YX44 SLC6A10P-202ENST00000431994 2058 ntBASIC20.83■□□□□ 0.93
TRBV5-5A0A0J9YX44 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC20.83■□□□□ 0.93
TRBV5-5A0A0J9YX44 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
TRBV5-5A0A0J9YX44 MED25-210ENST00000612854 801 ntTSL 5 BASIC20.83■□□□□ 0.93
TRBV5-5A0A0J9YX44 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
TRBV5-5A0A0J9YX44 MED25-214ENST00000622402 642 ntTSL 5 BASIC20.83■□□□□ 0.93
TRBV5-5A0A0J9YX44 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
TRBV5-5A0A0J9YX44 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
TRBV5-5A0A0J9YX44 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
TRBV5-5A0A0J9YX44 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
TRBV5-5A0A0J9YX44 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TRBV5-5A0A0J9YX44 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC20.82■□□□□ 0.92
TRBV5-5A0A0J9YX44 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC20.82■□□□□ 0.92
TRBV5-5A0A0J9YX44 DUX4L11-201ENST00000611504 1267 ntBASIC20.82■□□□□ 0.92
TRBV5-5A0A0J9YX44 DUX4L12-201ENST00000614593 1267 ntBASIC20.82■□□□□ 0.92
TRBV5-5A0A0J9YX44 DUX4L14-201ENST00000621227 1267 ntBASIC20.82■□□□□ 0.92
TRBV5-5A0A0J9YX44 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
TRBV5-5A0A0J9YX44 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TRBV5-5A0A0J9YX44 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TRBV5-5A0A0J9YX44 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TRBV5-5A0A0J9YX44 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TRBV5-5A0A0J9YX44 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TRBV5-5A0A0J9YX44 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC20.81■□□□□ 0.92
TRBV5-5A0A0J9YX44 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TRBV5-5A0A0J9YX44 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TRBV5-5A0A0J9YX44 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TRBV5-5A0A0J9YX44 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TRBV5-5A0A0J9YX44 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TRBV5-5A0A0J9YX44 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRBV5-5A0A0J9YX44 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC20.8■□□□□ 0.92
TRBV5-5A0A0J9YX44 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC20.8■□□□□ 0.92
TRBV5-5A0A0J9YX44 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRBV5-5A0A0J9YX44 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRBV5-5A0A0J9YX44 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRBV5-5A0A0J9YX44 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC20.78■□□□□ 0.92
TRBV5-5A0A0J9YX44 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRBV5-5A0A0J9YX44 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TRBV5-5A0A0J9YX44 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC20.78■□□□□ 0.92
TRBV5-5A0A0J9YX44 HES6-205ENST00000409356 528 ntTSL 2 BASIC20.78■□□□□ 0.92
TRBV5-5A0A0J9YX44 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC20.78■□□□□ 0.92
TRBV5-5A0A0J9YX44 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC20.78■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms