Protein–RNA interactions for Protein: A0A0J9YWB2

TRBV7-9, T-cell receptor beta variable 7-9 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV7-9A0A0J9YWB2 MED25-214ENST00000622402 642 ntTSL 5 BASIC17.85■□□□□ 0.45
TRBV7-9A0A0J9YWB2 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
TRBV7-9A0A0J9YWB2 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TRBV7-9A0A0J9YWB2 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
TRBV7-9A0A0J9YWB2 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC17.84■□□□□ 0.45
TRBV7-9A0A0J9YWB2 CR559946.2-201ENST00000623684 991 ntBASIC17.84■□□□□ 0.45
TRBV7-9A0A0J9YWB2 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRBV7-9A0A0J9YWB2 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRBV7-9A0A0J9YWB2 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
TRBV7-9A0A0J9YWB2 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRBV7-9A0A0J9YWB2 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRBV7-9A0A0J9YWB2 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TRBV7-9A0A0J9YWB2 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
TRBV7-9A0A0J9YWB2 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC17.83■□□□□ 0.45
TRBV7-9A0A0J9YWB2 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC17.83■□□□□ 0.45
TRBV7-9A0A0J9YWB2 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
TRBV7-9A0A0J9YWB2 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
TRBV7-9A0A0J9YWB2 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TRBV7-9A0A0J9YWB2 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TRBV7-9A0A0J9YWB2 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TRBV7-9A0A0J9YWB2 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
TRBV7-9A0A0J9YWB2 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
TRBV7-9A0A0J9YWB2 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRBV7-9A0A0J9YWB2 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRBV7-9A0A0J9YWB2 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TRBV7-9A0A0J9YWB2 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRBV7-9A0A0J9YWB2 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
TRBV7-9A0A0J9YWB2 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TRBV7-9A0A0J9YWB2 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC17.82■□□□□ 0.44
TRBV7-9A0A0J9YWB2 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRBV7-9A0A0J9YWB2 AC022211.4-201ENST00000625094 2161 ntBASIC17.81■□□□□ 0.44
TRBV7-9A0A0J9YWB2 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRBV7-9A0A0J9YWB2 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC17.81■□□□□ 0.44
TRBV7-9A0A0J9YWB2 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRBV7-9A0A0J9YWB2 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TRBV7-9A0A0J9YWB2 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TRBV7-9A0A0J9YWB2 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
TRBV7-9A0A0J9YWB2 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
TRBV7-9A0A0J9YWB2 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRBV7-9A0A0J9YWB2 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC17.79■□□□□ 0.44
TRBV7-9A0A0J9YWB2 MED17-227ENST00000640521 2047 ntTSL 5 BASIC17.79■□□□□ 0.44
TRBV7-9A0A0J9YWB2 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRBV7-9A0A0J9YWB2 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TRBV7-9A0A0J9YWB2 MIR3648-2-201ENST00000581792 180 ntBASIC17.79■□□□□ 0.44
TRBV7-9A0A0J9YWB2 MIR3648-1-201ENST00000615959 180 ntBASIC17.79■□□□□ 0.44
TRBV7-9A0A0J9YWB2 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC17.79■□□□□ 0.44
TRBV7-9A0A0J9YWB2 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TRBV7-9A0A0J9YWB2 AC093323.1-202ENST00000635031 2045 ntBASIC17.79■□□□□ 0.44
TRBV7-9A0A0J9YWB2 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC17.78■□□□□ 0.44
TRBV7-9A0A0J9YWB2 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRBV7-9A0A0J9YWB2 GDI1-215ENST00000630693 786 ntTSL 4 BASIC17.78■□□□□ 0.44
TRBV7-9A0A0J9YWB2 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
TRBV7-9A0A0J9YWB2 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRBV7-9A0A0J9YWB2 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRBV7-9A0A0J9YWB2 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC17.78■□□□□ 0.44
TRBV7-9A0A0J9YWB2 AC097639.1-201ENST00000565519 1891 ntBASIC17.78■□□□□ 0.44
TRBV7-9A0A0J9YWB2 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRBV7-9A0A0J9YWB2 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TRBV7-9A0A0J9YWB2 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRBV7-9A0A0J9YWB2 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TRBV7-9A0A0J9YWB2 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC17.77■□□□□ 0.44
TRBV7-9A0A0J9YWB2 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
TRBV7-9A0A0J9YWB2 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRBV7-9A0A0J9YWB2 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRBV7-9A0A0J9YWB2 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
TRBV7-9A0A0J9YWB2 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC17.77■□□□□ 0.43
TRBV7-9A0A0J9YWB2 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
TRBV7-9A0A0J9YWB2 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
TRBV7-9A0A0J9YWB2 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC17.76■□□□□ 0.43
TRBV7-9A0A0J9YWB2 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRBV7-9A0A0J9YWB2 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC17.76■□□□□ 0.43
TRBV7-9A0A0J9YWB2 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TRBV7-9A0A0J9YWB2 ABHD17AP4-201ENST00000411545 909 ntBASIC17.76■□□□□ 0.43
TRBV7-9A0A0J9YWB2 PFN2-211ENST00000489155 636 ntTSL 4 BASIC17.76■□□□□ 0.43
TRBV7-9A0A0J9YWB2 AP003733.4-201ENST00000623785 1697 ntBASIC17.76■□□□□ 0.43
TRBV7-9A0A0J9YWB2 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TRBV7-9A0A0J9YWB2 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC17.76■□□□□ 0.43
TRBV7-9A0A0J9YWB2 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRBV7-9A0A0J9YWB2 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC17.76■□□□□ 0.43
TRBV7-9A0A0J9YWB2 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRBV7-9A0A0J9YWB2 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRBV7-9A0A0J9YWB2 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TRBV7-9A0A0J9YWB2 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRBV7-9A0A0J9YWB2 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC17.75■□□□□ 0.43
TRBV7-9A0A0J9YWB2 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRBV7-9A0A0J9YWB2 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRBV7-9A0A0J9YWB2 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
TRBV7-9A0A0J9YWB2 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TRBV7-9A0A0J9YWB2 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRBV7-9A0A0J9YWB2 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRBV7-9A0A0J9YWB2 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TRBV7-9A0A0J9YWB2 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRBV7-9A0A0J9YWB2 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC17.73■□□□□ 0.43
TRBV7-9A0A0J9YWB2 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRBV7-9A0A0J9YWB2 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TRBV7-9A0A0J9YWB2 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRBV7-9A0A0J9YWB2 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRBV7-9A0A0J9YWB2 AC138932.3-201ENST00000567634 1902 ntBASIC17.73■□□□□ 0.43
TRBV7-9A0A0J9YWB2 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRBV7-9A0A0J9YWB2 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 94.2 ms