Protein–RNA interactions for Protein: Q9Y3P8

SIT1, Signaling threshold-regulating transmembrane adapter 1, humanhuman

Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIT1Q9Y3P8 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC24.75■■□□□ 1.55
SIT1Q9Y3P8 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
SIT1Q9Y3P8 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
SIT1Q9Y3P8 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
SIT1Q9Y3P8 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC24.75■■□□□ 1.55
SIT1Q9Y3P8 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC24.74■■□□□ 1.55
SIT1Q9Y3P8 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC24.74■■□□□ 1.55
SIT1Q9Y3P8 KRT18P10-201ENST00000388836 1287 ntBASIC24.74■■□□□ 1.55
SIT1Q9Y3P8 TRIR-202ENST00000588213 841 ntTSL 3 BASIC24.74■■□□□ 1.55
SIT1Q9Y3P8 AC137630.3-201ENST00000607245 391 ntBASIC24.74■■□□□ 1.55
SIT1Q9Y3P8 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC24.74■■□□□ 1.55
SIT1Q9Y3P8 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC24.74■■□□□ 1.55
SIT1Q9Y3P8 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
SIT1Q9Y3P8 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC24.74■■□□□ 1.55
SIT1Q9Y3P8 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC24.74■■□□□ 1.55
SIT1Q9Y3P8 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC24.74■■□□□ 1.55
SIT1Q9Y3P8 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC24.73■■□□□ 1.55
SIT1Q9Y3P8 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC24.73■■□□□ 1.55
SIT1Q9Y3P8 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC24.73■■□□□ 1.55
SIT1Q9Y3P8 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC24.73■■□□□ 1.55
SIT1Q9Y3P8 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC24.73■■□□□ 1.55
SIT1Q9Y3P8 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC24.73■■□□□ 1.55
SIT1Q9Y3P8 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
SIT1Q9Y3P8 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
SIT1Q9Y3P8 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
SIT1Q9Y3P8 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC24.72■■□□□ 1.55
SIT1Q9Y3P8 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
SIT1Q9Y3P8 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC24.72■■□□□ 1.55
SIT1Q9Y3P8 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
SIT1Q9Y3P8 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
SIT1Q9Y3P8 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC24.71■■□□□ 1.55
SIT1Q9Y3P8 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC24.71■■□□□ 1.55
SIT1Q9Y3P8 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC24.7■■□□□ 1.54
SIT1Q9Y3P8 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC24.7■■□□□ 1.54
SIT1Q9Y3P8 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
SIT1Q9Y3P8 AC021242.3-201ENST00000607598 1377 ntBASIC24.69■■□□□ 1.54
SIT1Q9Y3P8 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
SIT1Q9Y3P8 RPP21-222ENST00000433076 577 ntTSL 2 BASIC24.69■■□□□ 1.54
SIT1Q9Y3P8 AC131281.2-201ENST00000520478 145 ntBASIC24.69■■□□□ 1.54
SIT1Q9Y3P8 SRR-208ENST00000576848 588 ntTSL 4 BASIC24.69■■□□□ 1.54
SIT1Q9Y3P8 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
SIT1Q9Y3P8 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
SIT1Q9Y3P8 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC24.69■■□□□ 1.54
SIT1Q9Y3P8 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
SIT1Q9Y3P8 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC24.68■■□□□ 1.54
SIT1Q9Y3P8 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
SIT1Q9Y3P8 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC24.68■■□□□ 1.54
SIT1Q9Y3P8 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC24.68■■□□□ 1.54
SIT1Q9Y3P8 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC24.68■■□□□ 1.54
SIT1Q9Y3P8 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
SIT1Q9Y3P8 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
SIT1Q9Y3P8 AL136116.3-201ENST00000402907 1138 ntBASIC24.67■■□□□ 1.54
SIT1Q9Y3P8 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC24.67■■□□□ 1.54
SIT1Q9Y3P8 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC24.67■■□□□ 1.54
SIT1Q9Y3P8 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC24.66■■□□□ 1.54
SIT1Q9Y3P8 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC24.66■■□□□ 1.54
SIT1Q9Y3P8 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC24.66■■□□□ 1.54
SIT1Q9Y3P8 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
SIT1Q9Y3P8 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC24.65■■□□□ 1.54
SIT1Q9Y3P8 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC24.65■■□□□ 1.54
SIT1Q9Y3P8 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC24.65■■□□□ 1.54
SIT1Q9Y3P8 AC092028.1-203ENST00000608262 953 ntBASIC24.65■■□□□ 1.54
SIT1Q9Y3P8 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
SIT1Q9Y3P8 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC24.64■■□□□ 1.54
SIT1Q9Y3P8 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
SIT1Q9Y3P8 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
SIT1Q9Y3P8 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC24.63■■□□□ 1.53
SIT1Q9Y3P8 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC24.63■■□□□ 1.53
SIT1Q9Y3P8 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
SIT1Q9Y3P8 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
SIT1Q9Y3P8 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC24.62■■□□□ 1.53
SIT1Q9Y3P8 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC24.61■■□□□ 1.53
SIT1Q9Y3P8 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC24.61■■□□□ 1.53
SIT1Q9Y3P8 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC24.61■■□□□ 1.53
SIT1Q9Y3P8 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC24.61■■□□□ 1.53
SIT1Q9Y3P8 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC24.61■■□□□ 1.53
SIT1Q9Y3P8 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC24.61■■□□□ 1.53
SIT1Q9Y3P8 AC120024.1-201ENST00000562672 995 ntBASIC24.61■■□□□ 1.53
SIT1Q9Y3P8 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC24.61■■□□□ 1.53
SIT1Q9Y3P8 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
SIT1Q9Y3P8 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC24.61■■□□□ 1.53
SIT1Q9Y3P8 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
SIT1Q9Y3P8 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC24.6■■□□□ 1.53
SIT1Q9Y3P8 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC24.6■■□□□ 1.53
SIT1Q9Y3P8 AC005837.3-201ENST00000612163 286 ntBASIC24.6■■□□□ 1.53
SIT1Q9Y3P8 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC24.6■■□□□ 1.53
SIT1Q9Y3P8 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC24.6■■□□□ 1.53
SIT1Q9Y3P8 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
SIT1Q9Y3P8 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC24.59■■□□□ 1.53
SIT1Q9Y3P8 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
SIT1Q9Y3P8 AC110285.6-201ENST00000617652 491 ntBASIC24.59■■□□□ 1.53
SIT1Q9Y3P8 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC24.58■■□□□ 1.53
SIT1Q9Y3P8 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC24.58■■□□□ 1.53
SIT1Q9Y3P8 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
SIT1Q9Y3P8 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC24.58■■□□□ 1.53
SIT1Q9Y3P8 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC24.58■■□□□ 1.52
SIT1Q9Y3P8 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC24.57■■□□□ 1.52
SIT1Q9Y3P8 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
SIT1Q9Y3P8 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC24.57■■□□□ 1.52
SIT1Q9Y3P8 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC24.57■■□□□ 1.52
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms