Protein–RNA interactions for Protein: Q9H3E2

SNX25, Sorting nexin-25, humanhuman

Predictions only

Length 840 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25Q9H3E2 ATP5G2P3-201ENST00000429083 425 ntBASIC25.87■■□□□ 1.73
SNX25Q9H3E2 AL033527.3-201ENST00000566366 1196 ntBASIC25.87■■□□□ 1.73
SNX25Q9H3E2 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC25.87■■□□□ 1.73
SNX25Q9H3E2 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
SNX25Q9H3E2 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
SNX25Q9H3E2 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC25.86■■□□□ 1.73
SNX25Q9H3E2 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
SNX25Q9H3E2 TSPY13P-201ENST00000338964 914 ntBASIC25.86■■□□□ 1.73
SNX25Q9H3E2 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
SNX25Q9H3E2 DUX4L9-201ENST00000449051 1259 ntBASIC25.86■■□□□ 1.73
SNX25Q9H3E2 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC25.86■■□□□ 1.73
SNX25Q9H3E2 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
SNX25Q9H3E2 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC25.86■■□□□ 1.73
SNX25Q9H3E2 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC25.86■■□□□ 1.73
SNX25Q9H3E2 AC018755.3-202ENST00000596210 929 ntBASIC25.85■■□□□ 1.73
SNX25Q9H3E2 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
SNX25Q9H3E2 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC25.85■■□□□ 1.73
SNX25Q9H3E2 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC25.85■■□□□ 1.73
SNX25Q9H3E2 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
SNX25Q9H3E2 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
SNX25Q9H3E2 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC25.84■■□□□ 1.73
SNX25Q9H3E2 SPCS2P3-201ENST00000500401 656 ntBASIC25.84■■□□□ 1.73
SNX25Q9H3E2 DUX4L18-201ENST00000553347 1267 ntBASIC25.84■■□□□ 1.73
SNX25Q9H3E2 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
SNX25Q9H3E2 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
SNX25Q9H3E2 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC25.84■■□□□ 1.73
SNX25Q9H3E2 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
SNX25Q9H3E2 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC25.83■■□□□ 1.73
SNX25Q9H3E2 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
SNX25Q9H3E2 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC25.83■■□□□ 1.73
SNX25Q9H3E2 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.72
SNX25Q9H3E2 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
SNX25Q9H3E2 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
SNX25Q9H3E2 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC25.81■■□□□ 1.72
SNX25Q9H3E2 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
SNX25Q9H3E2 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
SNX25Q9H3E2 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC25.81■■□□□ 1.72
SNX25Q9H3E2 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
SNX25Q9H3E2 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC25.81■■□□□ 1.72
SNX25Q9H3E2 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC25.8■■□□□ 1.72
SNX25Q9H3E2 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC25.8■■□□□ 1.72
SNX25Q9H3E2 MIR6765-201ENST00000614092 87 ntBASIC25.8■■□□□ 1.72
SNX25Q9H3E2 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC25.8■■□□□ 1.72
SNX25Q9H3E2 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC25.8■■□□□ 1.72
SNX25Q9H3E2 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC25.79■■□□□ 1.72
SNX25Q9H3E2 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
SNX25Q9H3E2 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC25.79■■□□□ 1.72
SNX25Q9H3E2 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
SNX25Q9H3E2 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
SNX25Q9H3E2 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
SNX25Q9H3E2 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC25.78■■□□□ 1.72
SNX25Q9H3E2 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC25.78■■□□□ 1.72
SNX25Q9H3E2 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC25.77■■□□□ 1.72
SNX25Q9H3E2 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
SNX25Q9H3E2 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
SNX25Q9H3E2 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC25.77■■□□□ 1.72
SNX25Q9H3E2 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC25.77■■□□□ 1.72
SNX25Q9H3E2 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
SNX25Q9H3E2 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
SNX25Q9H3E2 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC25.76■■□□□ 1.71
SNX25Q9H3E2 GUK1-208ENST00000366728 842 ntTSL 2 BASIC25.76■■□□□ 1.71
SNX25Q9H3E2 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC25.76■■□□□ 1.71
SNX25Q9H3E2 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC25.76■■□□□ 1.71
SNX25Q9H3E2 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC25.76■■□□□ 1.71
SNX25Q9H3E2 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC25.76■■□□□ 1.71
SNX25Q9H3E2 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC25.76■■□□□ 1.71
SNX25Q9H3E2 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
SNX25Q9H3E2 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
SNX25Q9H3E2 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
SNX25Q9H3E2 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
SNX25Q9H3E2 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
SNX25Q9H3E2 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC25.75■■□□□ 1.71
SNX25Q9H3E2 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
SNX25Q9H3E2 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC25.74■■□□□ 1.71
SNX25Q9H3E2 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC25.74■■□□□ 1.71
SNX25Q9H3E2 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC25.73■■□□□ 1.71
SNX25Q9H3E2 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC25.73■■□□□ 1.71
SNX25Q9H3E2 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
SNX25Q9H3E2 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
SNX25Q9H3E2 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC25.72■■□□□ 1.71
SNX25Q9H3E2 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC25.72■■□□□ 1.71
SNX25Q9H3E2 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC25.72■■□□□ 1.71
SNX25Q9H3E2 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC25.72■■□□□ 1.71
SNX25Q9H3E2 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
SNX25Q9H3E2 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC25.72■■□□□ 1.71
SNX25Q9H3E2 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC25.72■■□□□ 1.71
SNX25Q9H3E2 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
SNX25Q9H3E2 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC25.72■■□□□ 1.71
SNX25Q9H3E2 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC25.71■■□□□ 1.71
SNX25Q9H3E2 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
SNX25Q9H3E2 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC25.71■■□□□ 1.71
SNX25Q9H3E2 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC25.71■■□□□ 1.71
SNX25Q9H3E2 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC25.7■■□□□ 1.71
SNX25Q9H3E2 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC25.7■■□□□ 1.71
SNX25Q9H3E2 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC25.7■■□□□ 1.71
SNX25Q9H3E2 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.71
SNX25Q9H3E2 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC25.7■■□□□ 1.7
SNX25Q9H3E2 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
SNX25Q9H3E2 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
SNX25Q9H3E2 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC25.7■■□□□ 1.7
Retrieved 100 of 98,524 protein–RNA pairs in 141 ms