Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
HDHD3Q9BSH5 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC20.33■□□□□ 0.85
HDHD3Q9BSH5 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
HDHD3Q9BSH5 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC20.32■□□□□ 0.84
HDHD3Q9BSH5 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
HDHD3Q9BSH5 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
HDHD3Q9BSH5 AL359504.2-201ENST00000605506 1601 ntBASIC20.32■□□□□ 0.84
HDHD3Q9BSH5 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
HDHD3Q9BSH5 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
HDHD3Q9BSH5 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
HDHD3Q9BSH5 CHST11-203ENST00000547956 936 ntTSL 2 BASIC20.32■□□□□ 0.84
HDHD3Q9BSH5 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
HDHD3Q9BSH5 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
HDHD3Q9BSH5 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC20.32■□□□□ 0.84
HDHD3Q9BSH5 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC20.32■□□□□ 0.84
HDHD3Q9BSH5 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
HDHD3Q9BSH5 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
HDHD3Q9BSH5 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
HDHD3Q9BSH5 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
HDHD3Q9BSH5 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
HDHD3Q9BSH5 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
HDHD3Q9BSH5 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC20.31■□□□□ 0.84
HDHD3Q9BSH5 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC20.31■□□□□ 0.84
HDHD3Q9BSH5 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HDHD3Q9BSH5 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HDHD3Q9BSH5 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
HDHD3Q9BSH5 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC20.3■□□□□ 0.84
HDHD3Q9BSH5 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
HDHD3Q9BSH5 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HDHD3Q9BSH5 HES6-205ENST00000409356 528 ntTSL 2 BASIC20.3■□□□□ 0.84
HDHD3Q9BSH5 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC20.3■□□□□ 0.84
HDHD3Q9BSH5 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
HDHD3Q9BSH5 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC20.3■□□□□ 0.84
HDHD3Q9BSH5 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
HDHD3Q9BSH5 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
HDHD3Q9BSH5 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HDHD3Q9BSH5 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HDHD3Q9BSH5 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HDHD3Q9BSH5 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
HDHD3Q9BSH5 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HDHD3Q9BSH5 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC20.29■□□□□ 0.84
HDHD3Q9BSH5 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HDHD3Q9BSH5 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC20.29■□□□□ 0.84
HDHD3Q9BSH5 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
HDHD3Q9BSH5 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HDHD3Q9BSH5 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC20.28■□□□□ 0.84
HDHD3Q9BSH5 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HDHD3Q9BSH5 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
HDHD3Q9BSH5 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC20.28■□□□□ 0.84
HDHD3Q9BSH5 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
HDHD3Q9BSH5 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC20.27■□□□□ 0.84
HDHD3Q9BSH5 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
HDHD3Q9BSH5 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
HDHD3Q9BSH5 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC20.27■□□□□ 0.84
HDHD3Q9BSH5 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
HDHD3Q9BSH5 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC20.27■□□□□ 0.84
HDHD3Q9BSH5 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
HDHD3Q9BSH5 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
HDHD3Q9BSH5 PREB-202ENST00000406567 1910 ntTSL 5 BASIC20.27■□□□□ 0.84
HDHD3Q9BSH5 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
HDHD3Q9BSH5 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
HDHD3Q9BSH5 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HDHD3Q9BSH5 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC20.26■□□□□ 0.83
HDHD3Q9BSH5 MED25-210ENST00000612854 801 ntTSL 5 BASIC20.26■□□□□ 0.83
HDHD3Q9BSH5 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
HDHD3Q9BSH5 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HDHD3Q9BSH5 MED25-214ENST00000622402 642 ntTSL 5 BASIC20.26■□□□□ 0.83
HDHD3Q9BSH5 THRA-202ENST00000394121 2260 ntTSL 2 BASIC20.26■□□□□ 0.83
HDHD3Q9BSH5 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC20.26■□□□□ 0.83
HDHD3Q9BSH5 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC20.26■□□□□ 0.83
HDHD3Q9BSH5 AL139125.2-201ENST00000623134 1869 ntBASIC20.26■□□□□ 0.83
HDHD3Q9BSH5 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HDHD3Q9BSH5 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC20.25■□□□□ 0.83
HDHD3Q9BSH5 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HDHD3Q9BSH5 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HDHD3Q9BSH5 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
HDHD3Q9BSH5 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HDHD3Q9BSH5 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
HDHD3Q9BSH5 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HDHD3Q9BSH5 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
HDHD3Q9BSH5 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HDHD3Q9BSH5 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC20.24■□□□□ 0.83
HDHD3Q9BSH5 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
HDHD3Q9BSH5 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
HDHD3Q9BSH5 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
HDHD3Q9BSH5 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
HDHD3Q9BSH5 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
HDHD3Q9BSH5 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
HDHD3Q9BSH5 ZNRF2P2-203ENST00000454624 420 ntBASIC20.23■□□□□ 0.83
HDHD3Q9BSH5 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC20.23■□□□□ 0.83
HDHD3Q9BSH5 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
HDHD3Q9BSH5 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
HDHD3Q9BSH5 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
HDHD3Q9BSH5 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HDHD3Q9BSH5 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HDHD3Q9BSH5 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HDHD3Q9BSH5 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HDHD3Q9BSH5 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC20.22■□□□□ 0.83
HDHD3Q9BSH5 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
HDHD3Q9BSH5 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms