Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC25.58■■□□□ 1.69
TRIM11Q96F44 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC25.58■■□□□ 1.68
TRIM11Q96F44 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC25.57■■□□□ 1.68
TRIM11Q96F44 AL157400.5-201ENST00000507624 621 ntBASIC25.57■■□□□ 1.68
TRIM11Q96F44 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
TRIM11Q96F44 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC25.57■■□□□ 1.68
TRIM11Q96F44 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC25.57■■□□□ 1.68
TRIM11Q96F44 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
TRIM11Q96F44 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC25.56■■□□□ 1.68
TRIM11Q96F44 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC25.56■■□□□ 1.68
TRIM11Q96F44 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC25.56■■□□□ 1.68
TRIM11Q96F44 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC25.56■■□□□ 1.68
TRIM11Q96F44 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC25.56■■□□□ 1.68
TRIM11Q96F44 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC25.56■■□□□ 1.68
TRIM11Q96F44 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
TRIM11Q96F44 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
TRIM11Q96F44 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
TRIM11Q96F44 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
TRIM11Q96F44 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
TRIM11Q96F44 TPT1-202ENST00000379055 948 ntTSL 2 BASIC25.55■■□□□ 1.68
TRIM11Q96F44 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
TRIM11Q96F44 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC25.55■■□□□ 1.68
TRIM11Q96F44 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
TRIM11Q96F44 AC096887.2-201ENST00000623443 1957 ntBASIC25.55■■□□□ 1.68
TRIM11Q96F44 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC25.54■■□□□ 1.68
TRIM11Q96F44 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC25.54■■□□□ 1.68
TRIM11Q96F44 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
TRIM11Q96F44 PFN2-211ENST00000489155 636 ntTSL 4 BASIC25.54■■□□□ 1.68
TRIM11Q96F44 RPS2-202ENST00000526522 924 ntTSL 2 BASIC25.54■■□□□ 1.68
TRIM11Q96F44 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC25.54■■□□□ 1.68
TRIM11Q96F44 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
TRIM11Q96F44 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC25.53■■□□□ 1.68
TRIM11Q96F44 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC25.53■■□□□ 1.68
TRIM11Q96F44 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC25.53■■□□□ 1.68
TRIM11Q96F44 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC25.53■■□□□ 1.68
TRIM11Q96F44 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
TRIM11Q96F44 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
TRIM11Q96F44 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC25.52■■□□□ 1.68
TRIM11Q96F44 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
TRIM11Q96F44 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC25.52■■□□□ 1.68
TRIM11Q96F44 AC025884.2-201ENST00000553429 711 ntBASIC25.52■■□□□ 1.68
TRIM11Q96F44 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC25.52■■□□□ 1.68
TRIM11Q96F44 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC25.52■■□□□ 1.68
TRIM11Q96F44 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC25.52■■□□□ 1.68
TRIM11Q96F44 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
TRIM11Q96F44 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC25.51■■□□□ 1.67
TRIM11Q96F44 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC25.51■■□□□ 1.67
TRIM11Q96F44 MOB2-207ENST00000614710 705 ntTSL 5 BASIC25.51■■□□□ 1.67
TRIM11Q96F44 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
TRIM11Q96F44 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
TRIM11Q96F44 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
TRIM11Q96F44 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
TRIM11Q96F44 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC25.49■■□□□ 1.67
TRIM11Q96F44 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
TRIM11Q96F44 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC25.49■■□□□ 1.67
TRIM11Q96F44 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
TRIM11Q96F44 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC25.49■■□□□ 1.67
TRIM11Q96F44 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
TRIM11Q96F44 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
TRIM11Q96F44 MIR3960-201ENST00000583311 91 ntBASIC25.49■■□□□ 1.67
TRIM11Q96F44 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
TRIM11Q96F44 AC092296.2-201ENST00000589470 999 ntBASIC25.49■■□□□ 1.67
TRIM11Q96F44 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC25.49■■□□□ 1.67
TRIM11Q96F44 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
TRIM11Q96F44 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
TRIM11Q96F44 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
TRIM11Q96F44 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC25.48■■□□□ 1.67
TRIM11Q96F44 SRP68-213ENST00000629930 165 ntTSL 5 BASIC25.48■■□□□ 1.67
TRIM11Q96F44 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
TRIM11Q96F44 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC25.47■■□□□ 1.67
TRIM11Q96F44 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
TRIM11Q96F44 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
TRIM11Q96F44 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC25.47■■□□□ 1.67
TRIM11Q96F44 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC25.47■■□□□ 1.67
TRIM11Q96F44 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
TRIM11Q96F44 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
TRIM11Q96F44 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC25.46■■□□□ 1.67
TRIM11Q96F44 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC25.46■■□□□ 1.67
TRIM11Q96F44 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
TRIM11Q96F44 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC25.45■■□□□ 1.66
TRIM11Q96F44 REST-210ENST00000638187 1334 ntTSL 5 BASIC25.45■■□□□ 1.66
TRIM11Q96F44 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC25.45■■□□□ 1.66
TRIM11Q96F44 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC25.45■■□□□ 1.66
TRIM11Q96F44 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
TRIM11Q96F44 SMPD5-203ENST00000639008 1464 ntBASIC25.45■■□□□ 1.66
TRIM11Q96F44 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC25.45■■□□□ 1.66
TRIM11Q96F44 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
TRIM11Q96F44 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC25.44■■□□□ 1.66
TRIM11Q96F44 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC25.44■■□□□ 1.66
TRIM11Q96F44 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC25.44■■□□□ 1.66
TRIM11Q96F44 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
TRIM11Q96F44 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
TRIM11Q96F44 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC25.43■■□□□ 1.66
TRIM11Q96F44 ECEL1P2-201ENST00000461596 1295 ntBASIC25.43■■□□□ 1.66
TRIM11Q96F44 CEBPA-AS1-201ENST00000592982 2198 ntBASIC25.43■■□□□ 1.66
TRIM11Q96F44 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC25.43■■□□□ 1.66
TRIM11Q96F44 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
TRIM11Q96F44 AC022413.1-201ENST00000624602 984 ntBASIC25.42■■□□□ 1.66
TRIM11Q96F44 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
TRIM11Q96F44 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC25.42■■□□□ 1.66
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms