Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC22.74■■□□□ 1.23
SIMC1Q8NDZ2 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC22.74■■□□□ 1.23
SIMC1Q8NDZ2 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
SIMC1Q8NDZ2 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
SIMC1Q8NDZ2 AC092803.2-201ENST00000564287 1899 ntBASIC22.73■■□□□ 1.23
SIMC1Q8NDZ2 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC22.73■■□□□ 1.23
SIMC1Q8NDZ2 HSD17B1P1-201ENST00000590052 955 ntBASIC22.73■■□□□ 1.23
SIMC1Q8NDZ2 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
SIMC1Q8NDZ2 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC22.73■■□□□ 1.23
SIMC1Q8NDZ2 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC22.72■■□□□ 1.23
SIMC1Q8NDZ2 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC22.72■■□□□ 1.23
SIMC1Q8NDZ2 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC22.72■■□□□ 1.23
SIMC1Q8NDZ2 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC22.72■■□□□ 1.23
SIMC1Q8NDZ2 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
SIMC1Q8NDZ2 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC22.72■■□□□ 1.23
SIMC1Q8NDZ2 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC22.72■■□□□ 1.23
SIMC1Q8NDZ2 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
SIMC1Q8NDZ2 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
SIMC1Q8NDZ2 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC22.71■■□□□ 1.23
SIMC1Q8NDZ2 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
SIMC1Q8NDZ2 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC22.71■■□□□ 1.23
SIMC1Q8NDZ2 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
SIMC1Q8NDZ2 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
SIMC1Q8NDZ2 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
SIMC1Q8NDZ2 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC22.7■■□□□ 1.22
SIMC1Q8NDZ2 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC22.69■■□□□ 1.22
SIMC1Q8NDZ2 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
SIMC1Q8NDZ2 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
SIMC1Q8NDZ2 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC22.69■■□□□ 1.22
SIMC1Q8NDZ2 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC22.69■■□□□ 1.22
SIMC1Q8NDZ2 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC22.69■■□□□ 1.22
SIMC1Q8NDZ2 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
SIMC1Q8NDZ2 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC22.68■■□□□ 1.22
SIMC1Q8NDZ2 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
SIMC1Q8NDZ2 RNF126P1-201ENST00000567452 1320 ntBASIC22.68■■□□□ 1.22
SIMC1Q8NDZ2 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
SIMC1Q8NDZ2 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
SIMC1Q8NDZ2 PFN2-211ENST00000489155 636 ntTSL 4 BASIC22.68■■□□□ 1.22
SIMC1Q8NDZ2 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
SIMC1Q8NDZ2 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
SIMC1Q8NDZ2 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC22.67■■□□□ 1.22
SIMC1Q8NDZ2 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC22.67■■□□□ 1.22
SIMC1Q8NDZ2 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
SIMC1Q8NDZ2 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
SIMC1Q8NDZ2 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC22.67■■□□□ 1.22
SIMC1Q8NDZ2 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC22.67■■□□□ 1.22
SIMC1Q8NDZ2 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC22.66■■□□□ 1.22
SIMC1Q8NDZ2 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC22.66■■□□□ 1.22
SIMC1Q8NDZ2 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC22.66■■□□□ 1.22
SIMC1Q8NDZ2 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
SIMC1Q8NDZ2 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
SIMC1Q8NDZ2 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
SIMC1Q8NDZ2 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC22.66■■□□□ 1.22
SIMC1Q8NDZ2 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
SIMC1Q8NDZ2 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
SIMC1Q8NDZ2 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
SIMC1Q8NDZ2 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
SIMC1Q8NDZ2 HES4-202ENST00000428771 1040 ntTSL 2 BASIC22.65■■□□□ 1.22
SIMC1Q8NDZ2 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
SIMC1Q8NDZ2 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC22.65■■□□□ 1.22
SIMC1Q8NDZ2 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
SIMC1Q8NDZ2 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC22.65■■□□□ 1.22
SIMC1Q8NDZ2 AC145676.1-201ENST00000514988 2004 ntBASIC22.64■■□□□ 1.22
SIMC1Q8NDZ2 AC007029.1-201ENST00000604183 313 ntBASIC22.64■■□□□ 1.21
SIMC1Q8NDZ2 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC22.64■■□□□ 1.21
SIMC1Q8NDZ2 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
SIMC1Q8NDZ2 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC22.63■■□□□ 1.21
SIMC1Q8NDZ2 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
SIMC1Q8NDZ2 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC22.63■■□□□ 1.21
SIMC1Q8NDZ2 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC22.63■■□□□ 1.21
SIMC1Q8NDZ2 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC22.62■■□□□ 1.21
SIMC1Q8NDZ2 REST-210ENST00000638187 1334 ntTSL 5 BASIC22.62■■□□□ 1.21
SIMC1Q8NDZ2 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
SIMC1Q8NDZ2 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
SIMC1Q8NDZ2 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
SIMC1Q8NDZ2 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC22.62■■□□□ 1.21
SIMC1Q8NDZ2 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
SIMC1Q8NDZ2 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC22.62■■□□□ 1.21
SIMC1Q8NDZ2 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
SIMC1Q8NDZ2 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC22.62■■□□□ 1.21
SIMC1Q8NDZ2 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
SIMC1Q8NDZ2 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC22.61■■□□□ 1.21
SIMC1Q8NDZ2 DUSP8P4-201ENST00000399538 1761 ntBASIC22.61■■□□□ 1.21
SIMC1Q8NDZ2 RARRES2P2-201ENST00000394842 485 ntBASIC22.61■■□□□ 1.21
SIMC1Q8NDZ2 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC22.61■■□□□ 1.21
SIMC1Q8NDZ2 MIR3960-201ENST00000583311 91 ntBASIC22.61■■□□□ 1.21
SIMC1Q8NDZ2 BRD4-212ENST00000630599 726 ntTSL 2 BASIC22.61■■□□□ 1.21
SIMC1Q8NDZ2 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
SIMC1Q8NDZ2 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
SIMC1Q8NDZ2 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC22.6■■□□□ 1.21
SIMC1Q8NDZ2 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC22.6■■□□□ 1.21
SIMC1Q8NDZ2 RP9P-202ENST00000450133 1212 ntBASIC22.6■■□□□ 1.21
SIMC1Q8NDZ2 AC093536.1-201ENST00000569153 554 ntBASIC22.6■■□□□ 1.21
SIMC1Q8NDZ2 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
SIMC1Q8NDZ2 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC22.6■■□□□ 1.21
SIMC1Q8NDZ2 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
SIMC1Q8NDZ2 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
SIMC1Q8NDZ2 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC22.59■■□□□ 1.21
SIMC1Q8NDZ2 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
SIMC1Q8NDZ2 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 132.9 ms