Protein–RNA interactions for Protein: Q8N535

LINC00471, Putative uncharacterized protein encoded by LINC00471, humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00471Q8N535 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC22.04■■□□□ 1.12
LINC00471Q8N535 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
LINC00471Q8N535 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
LINC00471Q8N535 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
LINC00471Q8N535 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC22.03■■□□□ 1.12
LINC00471Q8N535 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
LINC00471Q8N535 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
LINC00471Q8N535 AL359258.2-201ENST00000564063 1566 ntBASIC22.03■■□□□ 1.12
LINC00471Q8N535 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
LINC00471Q8N535 AL139125.2-201ENST00000623134 1869 ntBASIC22.03■■□□□ 1.12
LINC00471Q8N535 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
LINC00471Q8N535 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
LINC00471Q8N535 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC22.02■■□□□ 1.12
LINC00471Q8N535 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
LINC00471Q8N535 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
LINC00471Q8N535 CHST11-203ENST00000547956 936 ntTSL 2 BASIC22.02■■□□□ 1.12
LINC00471Q8N535 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC22.02■■□□□ 1.12
LINC00471Q8N535 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
LINC00471Q8N535 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC22.02■■□□□ 1.12
LINC00471Q8N535 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
LINC00471Q8N535 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
LINC00471Q8N535 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
LINC00471Q8N535 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
LINC00471Q8N535 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
LINC00471Q8N535 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC22.01■■□□□ 1.11
LINC00471Q8N535 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
LINC00471Q8N535 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
LINC00471Q8N535 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC22.01■■□□□ 1.11
LINC00471Q8N535 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
LINC00471Q8N535 AL359504.2-201ENST00000605506 1601 ntBASIC22.01■■□□□ 1.11
LINC00471Q8N535 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
LINC00471Q8N535 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
LINC00471Q8N535 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
LINC00471Q8N535 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
LINC00471Q8N535 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC22■■□□□ 1.11
LINC00471Q8N535 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC22■■□□□ 1.11
LINC00471Q8N535 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC22■■□□□ 1.11
LINC00471Q8N535 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.11
LINC00471Q8N535 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
LINC00471Q8N535 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
LINC00471Q8N535 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
LINC00471Q8N535 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
LINC00471Q8N535 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
LINC00471Q8N535 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC21.99■■□□□ 1.11
LINC00471Q8N535 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
LINC00471Q8N535 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
LINC00471Q8N535 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
LINC00471Q8N535 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
LINC00471Q8N535 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC21.98■■□□□ 1.11
LINC00471Q8N535 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
LINC00471Q8N535 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
LINC00471Q8N535 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
LINC00471Q8N535 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC21.98■■□□□ 1.11
LINC00471Q8N535 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC21.98■■□□□ 1.11
LINC00471Q8N535 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC21.97■■□□□ 1.11
LINC00471Q8N535 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
LINC00471Q8N535 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
LINC00471Q8N535 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
LINC00471Q8N535 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC21.97■■□□□ 1.11
LINC00471Q8N535 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC21.97■■□□□ 1.11
LINC00471Q8N535 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC21.97■■□□□ 1.11
LINC00471Q8N535 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
LINC00471Q8N535 DUX4L11-201ENST00000611504 1267 ntBASIC21.96■■□□□ 1.11
LINC00471Q8N535 DUX4L12-201ENST00000614593 1267 ntBASIC21.96■■□□□ 1.11
LINC00471Q8N535 DUX4L14-201ENST00000621227 1267 ntBASIC21.96■■□□□ 1.11
LINC00471Q8N535 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC21.96■■□□□ 1.11
LINC00471Q8N535 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
LINC00471Q8N535 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC21.96■■□□□ 1.11
LINC00471Q8N535 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
LINC00471Q8N535 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.11
LINC00471Q8N535 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC21.95■■□□□ 1.1
LINC00471Q8N535 AP003733.4-201ENST00000623785 1697 ntBASIC21.95■■□□□ 1.1
LINC00471Q8N535 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
LINC00471Q8N535 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC21.95■■□□□ 1.1
LINC00471Q8N535 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
LINC00471Q8N535 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC21.95■■□□□ 1.1
LINC00471Q8N535 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
LINC00471Q8N535 PREB-202ENST00000406567 1910 ntTSL 5 BASIC21.95■■□□□ 1.1
LINC00471Q8N535 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
LINC00471Q8N535 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC21.94■■□□□ 1.1
LINC00471Q8N535 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
LINC00471Q8N535 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC21.94■■□□□ 1.1
LINC00471Q8N535 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
LINC00471Q8N535 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
LINC00471Q8N535 THRA-202ENST00000394121 2260 ntTSL 2 BASIC21.94■■□□□ 1.1
LINC00471Q8N535 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
LINC00471Q8N535 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
LINC00471Q8N535 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
LINC00471Q8N535 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC21.93■■□□□ 1.1
LINC00471Q8N535 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC21.93■■□□□ 1.1
LINC00471Q8N535 AC126177.7-201ENST00000547904 679 ntBASIC21.93■■□□□ 1.1
LINC00471Q8N535 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC21.93■■□□□ 1.1
LINC00471Q8N535 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
LINC00471Q8N535 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
LINC00471Q8N535 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
LINC00471Q8N535 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC21.92■■□□□ 1.1
LINC00471Q8N535 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
LINC00471Q8N535 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC21.92■■□□□ 1.1
LINC00471Q8N535 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
LINC00471Q8N535 HES6-205ENST00000409356 528 ntTSL 2 BASIC21.92■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms